Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 MIR519E-201ENST00000385075 84 ntBASIC0.09□□□□□ -2.4
ZNF544Q6NX49 RNU6-127P-201ENST00000390897 107 ntBASIC0.09□□□□□ -2.4
ZNF544Q6NX49 Y_RNA.596-201ENST00000410462 109 ntBASIC0.09□□□□□ -2.4
ZNF544Q6NX49 RNU6-1064P-201ENST00000410626 104 ntBASIC0.09□□□□□ -2.4
ZNF544Q6NX49 AC109327.2-201ENST00000448339 378 ntBASIC0.09□□□□□ -2.4
ZNF544Q6NX49 RNU6-782P-201ENST00000516852 104 ntBASIC0.09□□□□□ -2.4
ZNF544Q6NX49 MIR4743-201ENST00000584576 69 ntBASIC0.09□□□□□ -2.4
ZNF544Q6NX49 Y_RNA.95-201ENST00000363079 95 ntBASIC0.08□□□□□ -2.4
ZNF544Q6NX49 RNU1-141P-201ENST00000364623 158 ntBASIC0.08□□□□□ -2.4
ZNF544Q6NX49 MIR181B2-201ENST00000385004 89 ntBASIC0.08□□□□□ -2.4
ZNF544Q6NX49 RNA5SP299-201ENST00000391203 116 ntBASIC0.08□□□□□ -2.4
ZNF544Q6NX49 Y_RNA.601-201ENST00000410500 113 ntBASIC0.08□□□□□ -2.4
ZNF544Q6NX49 RNA5SP484-201ENST00000458857 111 ntBASIC0.08□□□□□ -2.4
ZNF544Q6NX49 Y_RNA.648-201ENST00000459455 110 ntBASIC0.08□□□□□ -2.4
ZNF544Q6NX49 Y_RNA.659-201ENST00000515994 113 ntBASIC0.08□□□□□ -2.4
ZNF544Q6NX49 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.08□□□□□ -2.4
ZNF544Q6NX49 U6.100-201ENST00000636230 99 ntBASIC0.08□□□□□ -2.4
ZNF544Q6NX49 RNU6-957P-201ENST00000363652 99 ntBASIC0.07□□□□□ -2.4
ZNF544Q6NX49 SNORD114-9-201ENST00000364370 72 ntBASIC0.07□□□□□ -2.4
ZNF544Q6NX49 Y_RNA.283-201ENST00000364798 112 ntBASIC0.07□□□□□ -2.4
ZNF544Q6NX49 RNU6-466P-201ENST00000391224 103 ntBASIC0.07□□□□□ -2.4
ZNF544Q6NX49 MIR2113-201ENST00000459007 91 ntBASIC0.07□□□□□ -2.4
ZNF544Q6NX49 RNU6-287P-201ENST00000516230 98 ntBASIC0.07□□□□□ -2.4
ZNF544Q6NX49 Y_RNA.125-201ENST00000363371 111 ntBASIC0.06□□□□□ -2.4
ZNF544Q6NX49 RNU4-36P-201ENST00000364294 144 ntBASIC0.06□□□□□ -2.4
ZNF544Q6NX49 SNORD110-201ENST00000408189 75 ntBASIC0.06□□□□□ -2.4
ZNF544Q6NX49 MIR548H2-201ENST00000408874 88 ntBASIC0.06□□□□□ -2.4
ZNF544Q6NX49 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.06□□□□□ -2.4
ZNF544Q6NX49 AC006210.1-201ENST00000424882 111 ntBASIC0.06□□□□□ -2.4
ZNF544Q6NX49 HMGN2P22-201ENST00000427588 175 ntBASIC0.06□□□□□ -2.4
ZNF544Q6NX49 AL161932.1-201ENST00000437408 146 ntBASIC0.06□□□□□ -2.4
ZNF544Q6NX49 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.06□□□□□ -2.4
ZNF544Q6NX49 RNU6-904P-201ENST00000516206 101 ntBASIC0.06□□□□□ -2.4
ZNF544Q6NX49 RNU6-313P-201ENST00000516317 112 ntBASIC0.06□□□□□ -2.4
ZNF544Q6NX49 RNU6-589P-201ENST00000516485 107 ntBASIC0.06□□□□□ -2.4
ZNF544Q6NX49 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.06□□□□□ -2.4
ZNF544Q6NX49 NAMPTP3-201ENST00000569273 224 ntBASIC0.06□□□□□ -2.4
ZNF544Q6NX49 RNU6-86P-201ENST00000606534 107 ntBASIC0.06□□□□□ -2.4
ZNF544Q6NX49 MIR2909-201ENST00000617113 69 ntBASIC0.06□□□□□ -2.4
ZNF544Q6NX49 AC025521.1-201ENST00000621624 286 ntBASIC0.06□□□□□ -2.4
ZNF544Q6NX49 RNA5SP214-201ENST00000363378 118 ntBASIC0.05□□□□□ -2.4
ZNF544Q6NX49 Y_RNA.207-201ENST00000364142 106 ntBASIC0.05□□□□□ -2.4
ZNF544Q6NX49 Y_RNA.374-201ENST00000365606 101 ntBASIC0.05□□□□□ -2.4
ZNF544Q6NX49 RNU6-1056P-201ENST00000383996 107 ntBASIC0.05□□□□□ -2.4
ZNF544Q6NX49 RNU6-813P-201ENST00000384691 107 ntBASIC0.05□□□□□ -2.4
ZNF544Q6NX49 RNU6-1154P-201ENST00000391001 104 ntBASIC0.05□□□□□ -2.4
ZNF544Q6NX49 RNU2-51P-201ENST00000410708 197 ntBASIC0.05□□□□□ -2.4
ZNF544Q6NX49 snoU13.11-201ENST00000459219 104 ntBASIC0.05□□□□□ -2.4
ZNF544Q6NX49 RNU6-75P-201ENST00000515944 104 ntBASIC0.05□□□□□ -2.4
ZNF544Q6NX49 RNU6-406P-201ENST00000516470 107 ntBASIC0.05□□□□□ -2.4
ZNF544Q6NX49 MIR4777-201ENST00000583710 86 ntBASIC0.05□□□□□ -2.4
ZNF544Q6NX49 MIR4677-201ENST00000584153 80 ntBASIC0.05□□□□□ -2.4
ZNF544Q6NX49 AC069503.3-201ENST00000618674 145 ntBASIC0.05□□□□□ -2.4
ZNF544Q6NX49 MIR499B-201ENST00000636498 73 ntBASIC0.05□□□□□ -2.4
ZNF544Q6NX49 RNU6-644P-201ENST00000391155 98 ntBASIC0.04□□□□□ -2.4
ZNF544Q6NX49 MIR892B-201ENST00000401279 77 ntBASIC0.04□□□□□ -2.4
ZNF544Q6NX49 RNU7-129P-201ENST00000516128 62 ntBASIC0.04□□□□□ -2.4
ZNF544Q6NX49 RNU6-789P-201ENST00000517105 102 ntBASIC0.04□□□□□ -2.4
ZNF544Q6NX49 RNU6-537P-201ENST00000517277 103 ntBASIC0.04□□□□□ -2.4
ZNF544Q6NX49 AL513043.2-201ENST00000573941 143 ntBASIC0.04□□□□□ -2.4
ZNF544Q6NX49 MIR4768-201ENST00000585270 74 ntBASIC0.04□□□□□ -2.4
ZNF544Q6NX49 AC104408.1-201ENST00000605241 170 ntBASIC0.04□□□□□ -2.4
ZNF544Q6NX49 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.04□□□□□ -2.4
ZNF544Q6NX49 RNU6-664P-201ENST00000362381 107 ntBASIC0.03□□□□□ -2.4
ZNF544Q6NX49 Y_RNA.273-201ENST00000364703 102 ntBASIC0.03□□□□□ -2.4
ZNF544Q6NX49 RNU6-652P-201ENST00000365488 107 ntBASIC0.03□□□□□ -2.4
ZNF544Q6NX49 SNORD101-201ENST00000384027 73 ntBASIC0.03□□□□□ -2.4
ZNF544Q6NX49 SNORA51.5-201ENST00000384126 131 ntBASIC0.03□□□□□ -2.4
ZNF544Q6NX49 MIR643-201ENST00000385267 97 ntBASIC0.03□□□□□ -2.4
ZNF544Q6NX49 SCARNA23-201ENST00000516060 130 ntBASIC0.03□□□□□ -2.4
ZNF544Q6NX49 SNORA25.13-201ENST00000516395 103 ntBASIC0.03□□□□□ -2.4
ZNF544Q6NX49 MIR4696-201ENST00000581431 70 ntBASIC0.03□□□□□ -2.4
ZNF544Q6NX49 MIR5190-201ENST00000581537 80 ntBASIC0.03□□□□□ -2.4
ZNF544Q6NX49 MIR4290-201ENST00000583807 95 ntBASIC0.03□□□□□ -2.4
ZNF544Q6NX49 MIR6129-201ENST00000616087 109 ntBASIC0.03□□□□□ -2.4
ZNF544Q6NX49 SNORD114-5-201ENST00000362928 70 ntBASIC0.02□□□□□ -2.41
ZNF544Q6NX49 Y_RNA.467-201ENST00000384297 102 ntBASIC0.02□□□□□ -2.41
ZNF544Q6NX49 RNU6-106P-201ENST00000384405 107 ntBASIC0.02□□□□□ -2.41
ZNF544Q6NX49 MIR610-201ENST00000385139 96 ntBASIC0.02□□□□□ -2.41
ZNF544Q6NX49 MIR216B-201ENST00000390186 82 ntBASIC0.02□□□□□ -2.41
ZNF544Q6NX49 MIR876-201ENST00000401147 81 ntBASIC0.02□□□□□ -2.41
ZNF544Q6NX49 MIR1302-5-201ENST00000408164 150 ntBASIC0.02□□□□□ -2.41
ZNF544Q6NX49 MIR3925-201ENST00000584674 77 ntBASIC0.02□□□□□ -2.41
ZNF544Q6NX49 AC012531.4-201ENST00000616509 177 ntBASIC0.02□□□□□ -2.41
ZNF544Q6NX49 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.01□□□□□ -2.41
ZNF544Q6NX49 MT-TY-201ENST00000387409 66 ntBASIC0.01□□□□□ -2.41
ZNF544Q6NX49 RNU6-935P-201ENST00000410371 100 ntBASIC0.01□□□□□ -2.41
ZNF544Q6NX49 RNU7-85P-201ENST00000458851 63 ntBASIC0.01□□□□□ -2.41
ZNF544Q6NX49 Y_RNA.660-201ENST00000516002 120 ntBASIC0.01□□□□□ -2.41
ZNF544Q6NX49 AC103810.7-201ENST00000607821 91 ntBASIC0.01□□□□□ -2.41
ZNF544Q6NX49 Y_RNA.96-201ENST00000363092 109 ntBASIC0□□□□□ -2.41
ZNF544Q6NX49 RNU6-554P-201ENST00000410466 106 ntBASIC0□□□□□ -2.41
ZNF544Q6NX49 SNORA19.1-201ENST00000410656 129 ntBASIC0□□□□□ -2.41
ZNF544Q6NX49 Y_RNA.709-201ENST00000516952 92 ntBASIC0□□□□□ -2.41
ZNF544Q6NX49 MIR548Z-201ENST00000584743 97 ntBASIC0□□□□□ -2.41
ZNF544Q6NX49 Y_RNA.818-201ENST00000618813 71 ntBASIC0□□□□□ -2.41
ZNF544Q6NX49 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.01□□□□□ -2.41
ZNF544Q6NX49 MIR145-201ENST00000384967 88 ntBASIC-0.01□□□□□ -2.41
ZNF544Q6NX49 SNORA75.1-201ENST00000391130 148 ntBASIC-0.01□□□□□ -2.41
ZNF544Q6NX49 RNU6-972P-201ENST00000391208 107 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 241.7 ms