Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 SNORD45.1-201ENST00000363181 77 ntBASIC2.14□□□□□ -2.07
PRPF38BQ5VTL8 SNORA25.4-201ENST00000363666 124 ntBASIC2.14□□□□□ -2.07
PRPF38BQ5VTL8 MIR451A-201ENST00000385059 72 ntBASIC2.14□□□□□ -2.07
PRPF38BQ5VTL8 RNU4-37P-201ENST00000410214 84 ntBASIC2.14□□□□□ -2.07
PRPF38BQ5VTL8 AC079804.2-201ENST00000490376 200 ntBASIC2.14□□□□□ -2.07
PRPF38BQ5VTL8 RNU6-1265P-201ENST00000516342 103 ntBASIC2.14□□□□□ -2.07
PRPF38BQ5VTL8 RNU6-977P-201ENST00000516411 103 ntBASIC2.14□□□□□ -2.07
PRPF38BQ5VTL8 RNU6-1223P-201ENST00000517124 104 ntBASIC2.14□□□□□ -2.07
PRPF38BQ5VTL8 AL645939.4-201ENST00000604495 135 ntBASIC2.14□□□□□ -2.07
PRPF38BQ5VTL8 MIR8081-201ENST00000611533 95 ntBASIC2.14□□□□□ -2.07
PRPF38BQ5VTL8 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.14□□□□□ -2.07
PRPF38BQ5VTL8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
PRPF38BQ5VTL8 RNU7-90P-201ENST00000459216 62 ntBASIC2.13□□□□□ -2.07
PRPF38BQ5VTL8 RNU7-21P-201ENST00000459430 62 ntBASIC2.13□□□□□ -2.07
PRPF38BQ5VTL8 RNA5SP476-201ENST00000516613 103 ntBASIC2.13□□□□□ -2.07
PRPF38BQ5VTL8 RNU6-881P-201ENST00000516813 102 ntBASIC2.13□□□□□ -2.07
PRPF38BQ5VTL8 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PRPF38BQ5VTL8 SNORD116-24-201ENST00000384549 92 ntBASIC2.12□□□□□ -2.07
PRPF38BQ5VTL8 MIR100-201ENST00000385259 80 ntBASIC2.12□□□□□ -2.07
PRPF38BQ5VTL8 HMGN2P38-201ENST00000423806 265 ntBASIC2.12□□□□□ -2.07
PRPF38BQ5VTL8 RNU6-902P-201ENST00000517212 91 ntBASIC2.12□□□□□ -2.07
PRPF38BQ5VTL8 MIR4255-201ENST00000579351 72 ntBASIC2.12□□□□□ -2.07
PRPF38BQ5VTL8 MIR8053-201ENST00000613344 75 ntBASIC2.12□□□□□ -2.07
PRPF38BQ5VTL8 RNU7-102P-201ENST00000458948 62 ntBASIC2.11□□□□□ -2.07
PRPF38BQ5VTL8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.11□□□□□ -2.07
PRPF38BQ5VTL8 RNU6-499P-201ENST00000365615 107 ntBASIC2.1□□□□□ -2.07
PRPF38BQ5VTL8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
PRPF38BQ5VTL8 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PRPF38BQ5VTL8 RNA5SP245-201ENST00000364239 121 ntBASIC2.09□□□□□ -2.07
PRPF38BQ5VTL8 MIR9-3-201ENST00000385084 90 ntBASIC2.09□□□□□ -2.07
PRPF38BQ5VTL8 RNU1-119P-201ENST00000391122 165 ntBASIC2.09□□□□□ -2.07
PRPF38BQ5VTL8 AL157834.3-201ENST00000615543 103 ntBASIC2.09□□□□□ -2.07
PRPF38BQ5VTL8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.08
PRPF38BQ5VTL8 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
PRPF38BQ5VTL8 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PRPF38BQ5VTL8 MIR1-1-201ENST00000362147 71 ntBASIC2.08□□□□□ -2.08
PRPF38BQ5VTL8 SNORD113.1-201ENST00000363280 73 ntBASIC2.08□□□□□ -2.08
PRPF38BQ5VTL8 Y_RNA.258-201ENST00000364613 105 ntBASIC2.08□□□□□ -2.08
PRPF38BQ5VTL8 RNU6-604P-201ENST00000390917 100 ntBASIC2.08□□□□□ -2.08
PRPF38BQ5VTL8 AC067940.1-201ENST00000458411 300 ntBASIC2.08□□□□□ -2.08
PRPF38BQ5VTL8 HAR1A.1-201ENST00000459583 118 ntBASIC2.08□□□□□ -2.08
PRPF38BQ5VTL8 AC008608.1-201ENST00000603910 127 ntBASIC2.08□□□□□ -2.08
PRPF38BQ5VTL8 MIR502-201ENST00000606349 86 ntBASIC2.08□□□□□ -2.08
PRPF38BQ5VTL8 RNU6-1216P-201ENST00000362590 107 ntBASIC2.07□□□□□ -2.08
PRPF38BQ5VTL8 RNU6-1177P-201ENST00000391058 104 ntBASIC2.07□□□□□ -2.08
PRPF38BQ5VTL8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC2.07□□□□□ -2.08
PRPF38BQ5VTL8 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.07□□□□□ -2.08
PRPF38BQ5VTL8 RNU6-1057P-201ENST00000517162 102 ntBASIC2.07□□□□□ -2.08
PRPF38BQ5VTL8 MIR4804-201ENST00000581683 73 ntBASIC2.07□□□□□ -2.08
PRPF38BQ5VTL8 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
PRPF38BQ5VTL8 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
PRPF38BQ5VTL8 SNORA7.1-201ENST00000363750 139 ntBASIC2.06□□□□□ -2.08
PRPF38BQ5VTL8 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.06□□□□□ -2.08
PRPF38BQ5VTL8 AC104435.1-201ENST00000483483 166 ntBASIC2.06□□□□□ -2.08
PRPF38BQ5VTL8 SNORD79.1-201ENST00000516069 84 ntBASIC2.06□□□□□ -2.08
PRPF38BQ5VTL8 SNORA70.22-201ENST00000517160 124 ntBASIC2.06□□□□□ -2.08
PRPF38BQ5VTL8 MIR4511-201ENST00000582784 87 ntBASIC2.06□□□□□ -2.08
PRPF38BQ5VTL8 MIR4773-1-201ENST00000637203 78 ntBASIC2.06□□□□□ -2.08
PRPF38BQ5VTL8 RNU6-382P-201ENST00000365181 106 ntBASIC2.05□□□□□ -2.08
PRPF38BQ5VTL8 RNU4-52P-201ENST00000384209 138 ntBASIC2.05□□□□□ -2.08
PRPF38BQ5VTL8 MIR520F-201ENST00000384824 87 ntBASIC2.05□□□□□ -2.08
PRPF38BQ5VTL8 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.05□□□□□ -2.08
PRPF38BQ5VTL8 MIR151B-201ENST00000584249 96 ntBASIC2.05□□□□□ -2.08
PRPF38BQ5VTL8 MIR222-201ENST00000384992 110 ntBASIC2.04□□□□□ -2.08
PRPF38BQ5VTL8 RNU6-287P-201ENST00000516230 98 ntBASIC2.04□□□□□ -2.08
PRPF38BQ5VTL8 RN7SL793P-201ENST00000583259 296 ntBASIC2.04□□□□□ -2.08
PRPF38BQ5VTL8 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.04□□□□□ -2.08
PRPF38BQ5VTL8 RNU7-56P-201ENST00000458744 62 ntBASIC2.03□□□□□ -2.08
PRPF38BQ5VTL8 AC103706.3-201ENST00000636297 85 ntBASIC2.03□□□□□ -2.08
PRPF38BQ5VTL8 U3.27-201ENST00000391237 200 ntBASIC2.02□□□□□ -2.09
PRPF38BQ5VTL8 RNU6-274P-201ENST00000459566 107 ntBASIC2.02□□□□□ -2.09
PRPF38BQ5VTL8 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.02□□□□□ -2.09
PRPF38BQ5VTL8 AL109933.3-201ENST00000619095 188 ntBASIC2.02□□□□□ -2.09
PRPF38BQ5VTL8 MIR96-201ENST00000362288 78 ntBASIC2.01□□□□□ -2.09
PRPF38BQ5VTL8 RNU6-369P-201ENST00000362515 102 ntBASIC2.01□□□□□ -2.09
PRPF38BQ5VTL8 AC110620.1-201ENST00000416042 228 ntBASIC2.01□□□□□ -2.09
PRPF38BQ5VTL8 AC244505.6-201ENST00000452829 130 ntBASIC2.01□□□□□ -2.09
PRPF38BQ5VTL8 RNU6-752P-201ENST00000516376 102 ntBASIC2.01□□□□□ -2.09
PRPF38BQ5VTL8 AC244098.3-201ENST00000424803 96 ntBASIC2□□□□□ -2.09
PRPF38BQ5VTL8 MIR6788-201ENST00000618842 66 ntBASIC2□□□□□ -2.09
PRPF38BQ5VTL8 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
PRPF38BQ5VTL8 RNA5SP457-201ENST00000363657 124 ntBASIC1.99□□□□□ -2.09
PRPF38BQ5VTL8 RNU1-93P-201ENST00000364704 169 ntBASIC1.99□□□□□ -2.09
PRPF38BQ5VTL8 RNU6-669P-201ENST00000365575 107 ntBASIC1.98□□□□□ -2.09
PRPF38BQ5VTL8 SNORA40.6-201ENST00000391153 128 ntBASIC1.98□□□□□ -2.09
PRPF38BQ5VTL8 RPS29P1-201ENST00000465274 159 ntBASIC1.98□□□□□ -2.09
PRPF38BQ5VTL8 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.98□□□□□ -2.09
PRPF38BQ5VTL8 MIR4448-201ENST00000584360 86 ntBASIC1.98□□□□□ -2.09
PRPF38BQ5VTL8 MIR520E-201ENST00000384867 87 ntBASIC1.97□□□□□ -2.09
PRPF38BQ5VTL8 RNU6-982P-201ENST00000516216 102 ntBASIC1.97□□□□□ -2.09
PRPF38BQ5VTL8 RNU7-13P-201ENST00000516413 62 ntBASIC1.97□□□□□ -2.09
PRPF38BQ5VTL8 SNORA31.14-201ENST00000516728 116 ntBASIC1.97□□□□□ -2.09
PRPF38BQ5VTL8 SNORD53B-201ENST00000577887 78 ntBASIC1.97□□□□□ -2.09
PRPF38BQ5VTL8 MIR4421-201ENST00000578133 69 ntBASIC1.97□□□□□ -2.09
PRPF38BQ5VTL8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.97□□□□□ -2.09
PRPF38BQ5VTL8 Y_RNA.32-201ENST00000362589 110 ntBASIC1.96□□□□□ -2.1
PRPF38BQ5VTL8 SNORD115-24-201ENST00000363528 82 ntBASIC1.96□□□□□ -2.1
PRPF38BQ5VTL8 Y_RNA.174-201ENST00000363781 105 ntBASIC1.96□□□□□ -2.1
PRPF38BQ5VTL8 RNU6-1187P-201ENST00000364771 110 ntBASIC1.96□□□□□ -2.1
PRPF38BQ5VTL8 SNORD115-44-201ENST00000365391 82 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms