Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.9□□□□□ -2.71
VPS13DQ5THJ4 MIR4424-201ENST00000585257 86 ntBASIC-1.9□□□□□ -2.71
VPS13DQ5THJ4 RNU6-842P-201ENST00000384269 107 ntBASIC-1.9□□□□□ -2.71
VPS13DQ5THJ4 Y_RNA.472-201ENST00000384322 102 ntBASIC-1.9□□□□□ -2.71
VPS13DQ5THJ4 AC009161.2-201ENST00000624626 138 ntBASIC-1.9□□□□□ -2.71
VPS13DQ5THJ4 UBE2WP1-201ENST00000362030 340 ntBASIC-1.9□□□□□ -2.71
VPS13DQ5THJ4 RNU6-822P-201ENST00000362707 106 ntBASIC-1.9□□□□□ -2.71
VPS13DQ5THJ4 Y_RNA.137-201ENST00000363455 112 ntBASIC-1.9□□□□□ -2.71
VPS13DQ5THJ4 RNU6-413P-201ENST00000384115 107 ntBASIC-1.9□□□□□ -2.71
VPS13DQ5THJ4 MTND3P2-201ENST00000438452 342 ntBASIC-1.9□□□□□ -2.71
VPS13DQ5THJ4 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.9□□□□□ -2.71
VPS13DQ5THJ4 AL513043.2-201ENST00000573941 143 ntBASIC-1.9□□□□□ -2.71
VPS13DQ5THJ4 RNU5B-4P-201ENST00000363508 111 ntBASIC-1.91□□□□□ -2.71
VPS13DQ5THJ4 RNU6-649P-201ENST00000384463 107 ntBASIC-1.91□□□□□ -2.71
VPS13DQ5THJ4 RNU6-1161P-201ENST00000516176 102 ntBASIC-1.91□□□□□ -2.71
VPS13DQ5THJ4 MIR548V-201ENST00000584165 80 ntBASIC-1.91□□□□□ -2.71
VPS13DQ5THJ4 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.91□□□□□ -2.72
VPS13DQ5THJ4 RNU6-238P-201ENST00000363313 106 ntBASIC-1.91□□□□□ -2.72
VPS13DQ5THJ4 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.91□□□□□ -2.72
VPS13DQ5THJ4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.91□□□□□ -2.72
VPS13DQ5THJ4 RNU6-1220P-201ENST00000517126 108 ntBASIC-1.91□□□□□ -2.72
VPS13DQ5THJ4 AC018645.2-201ENST00000609151 472 ntBASIC-1.91□□□□□ -2.72
VPS13DQ5THJ4 AC013791.1-201ENST00000616619 62 ntBASIC-1.91□□□□□ -2.72
VPS13DQ5THJ4 RNU6-309P-201ENST00000364573 106 ntBASIC-1.91□□□□□ -2.72
VPS13DQ5THJ4 Y_RNA.378-201ENST00000365652 113 ntBASIC-1.91□□□□□ -2.72
VPS13DQ5THJ4 AL731563.1-201ENST00000442202 214 ntBASIC-1.91□□□□□ -2.72
VPS13DQ5THJ4 AC093424.1-201ENST00000604999 338 ntBASIC-1.91□□□□□ -2.72
VPS13DQ5THJ4 MIR3682-201ENST00000581338 84 ntBASIC-1.91□□□□□ -2.72
VPS13DQ5THJ4 AC006386.1-201ENST00000619436 415 ntBASIC-1.91□□□□□ -2.72
VPS13DQ5THJ4 U4.4-201ENST00000620626 117 ntBASIC-1.91□□□□□ -2.72
VPS13DQ5THJ4 RNU7-174P-201ENST00000516248 59 ntBASIC-1.92□□□□□ -2.72
VPS13DQ5THJ4 RNU6-523P-201ENST00000516304 54 ntBASIC-1.92□□□□□ -2.72
VPS13DQ5THJ4 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.92□□□□□ -2.72
VPS13DQ5THJ4 RNU6-698P-201ENST00000363523 107 ntBASIC-1.92□□□□□ -2.72
VPS13DQ5THJ4 RNU6-34P-201ENST00000364874 107 ntBASIC-1.92□□□□□ -2.72
VPS13DQ5THJ4 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.92□□□□□ -2.72
VPS13DQ5THJ4 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-1.92□□□□□ -2.72
VPS13DQ5THJ4 AC025521.1-201ENST00000621624 286 ntBASIC-1.92□□□□□ -2.72
VPS13DQ5THJ4 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.93□□□□□ -2.72
VPS13DQ5THJ4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.93□□□□□ -2.72
VPS13DQ5THJ4 RNU7-151P-201ENST00000516930 53 ntBASIC-1.93□□□□□ -2.72
VPS13DQ5THJ4 RNU4-68P-201ENST00000364314 141 ntBASIC-1.93□□□□□ -2.72
VPS13DQ5THJ4 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.93□□□□□ -2.72
VPS13DQ5THJ4 AC082651.2-201ENST00000496833 166 ntBASIC-1.93□□□□□ -2.72
VPS13DQ5THJ4 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.93□□□□□ -2.72
VPS13DQ5THJ4 MIR4659A-201ENST00000580269 81 ntBASIC-1.93□□□□□ -2.72
VPS13DQ5THJ4 AL021368.1-201ENST00000607490 540 ntBASIC-1.93□□□□□ -2.72
VPS13DQ5THJ4 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.94□□□□□ -2.72
VPS13DQ5THJ4 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.94□□□□□ -2.72
VPS13DQ5THJ4 RNU6-408P-201ENST00000515910 100 ntBASIC-1.94□□□□□ -2.72
VPS13DQ5THJ4 AC092747.3-201ENST00000603769 301 ntBASIC-1.94□□□□□ -2.72
VPS13DQ5THJ4 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.94□□□□□ -2.72
VPS13DQ5THJ4 SNORA24B-201ENST00000384176 131 ntBASIC-1.94□□□□□ -2.72
VPS13DQ5THJ4 SNORD90-201ENST00000391145 111 ntBASIC-1.94□□□□□ -2.72
VPS13DQ5THJ4 C8orf59P2-201ENST00000603441 271 ntBASIC-1.94□□□□□ -2.72
VPS13DQ5THJ4 RNU6-551P-201ENST00000516661 103 ntBASIC-1.94□□□□□ -2.72
VPS13DQ5THJ4 DEFB117-201ENST00000602356 141 ntBASIC-1.94□□□□□ -2.72
VPS13DQ5THJ4 AC037487.3-201ENST00000606668 112 ntBASIC-1.94□□□□□ -2.72
VPS13DQ5THJ4 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.94□□□□□ -2.72
VPS13DQ5THJ4 RNU6-598P-201ENST00000364017 105 ntBASIC-1.94□□□□□ -2.72
VPS13DQ5THJ4 RNU7-63P-201ENST00000459054 62 ntBASIC-1.94□□□□□ -2.72
VPS13DQ5THJ4 AC092794.1-201ENST00000612734 582 ntBASIC-1.94□□□□□ -2.72
VPS13DQ5THJ4 RNU6-176P-201ENST00000517196 105 ntBASIC-1.95□□□□□ -2.72
VPS13DQ5THJ4 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.95□□□□□ -2.72
VPS13DQ5THJ4 RNU6-996P-201ENST00000365438 107 ntBASIC-1.95□□□□□ -2.72
VPS13DQ5THJ4 RNY4P13-201ENST00000384284 96 ntBASIC-1.95□□□□□ -2.72
VPS13DQ5THJ4 RNU6-383P-201ENST00000410864 94 ntBASIC-1.95□□□□□ -2.72
VPS13DQ5THJ4 RNU7-85P-201ENST00000458851 63 ntBASIC-1.95□□□□□ -2.72
VPS13DQ5THJ4 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.95□□□□□ -2.72
VPS13DQ5THJ4 RNU6-616P-201ENST00000384353 107 ntBASIC-1.95□□□□□ -2.72
VPS13DQ5THJ4 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.95□□□□□ -2.72
VPS13DQ5THJ4 SNORD50.2-201ENST00000365465 70 ntBASIC-1.96□□□□□ -2.72
VPS13DQ5THJ4 RNU6-151P-201ENST00000364158 107 ntBASIC-1.96□□□□□ -2.72
VPS13DQ5THJ4 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.96□□□□□ -2.72
VPS13DQ5THJ4 SNORA17.4-201ENST00000391287 132 ntBASIC-1.96□□□□□ -2.72
VPS13DQ5THJ4 RNU6-453P-201ENST00000516819 85 ntBASIC-1.96□□□□□ -2.72
VPS13DQ5THJ4 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.96□□□□□ -2.72
VPS13DQ5THJ4 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.96□□□□□ -2.72
VPS13DQ5THJ4 RNU6-668P-201ENST00000364180 107 ntBASIC-1.96□□□□□ -2.72
VPS13DQ5THJ4 Y_RNA.663-201ENST00000516043 101 ntBASIC-1.96□□□□□ -2.72
VPS13DQ5THJ4 RNU6-273P-201ENST00000516937 96 ntBASIC-1.96□□□□□ -2.72
VPS13DQ5THJ4 AL157392.4-201ENST00000609756 345 ntBASIC-1.96□□□□□ -2.72
VPS13DQ5THJ4 RNU6-1103P-201ENST00000384150 107 ntBASIC-1.96□□□□□ -2.72
VPS13DQ5THJ4 MIR125B1-201ENST00000385236 88 ntBASIC-1.96□□□□□ -2.72
VPS13DQ5THJ4 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.96□□□□□ -2.72
VPS13DQ5THJ4 RNU6-1156P-201ENST00000410365 100 ntBASIC-1.96□□□□□ -2.72
VPS13DQ5THJ4 SNORD63.2-201ENST00000516303 64 ntBASIC-1.96□□□□□ -2.72
VPS13DQ5THJ4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.96□□□□□ -2.72
VPS13DQ5THJ4 SNORD113-2-201ENST00000391082 72 ntBASIC-1.97□□□□□ -2.72
VPS13DQ5THJ4 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.97□□□□□ -2.72
VPS13DQ5THJ4 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.97□□□□□ -2.73
VPS13DQ5THJ4 SNORD116-16-201ENST00000384533 92 ntBASIC-1.97□□□□□ -2.73
VPS13DQ5THJ4 MIR759-201ENST00000390224 91 ntBASIC-1.97□□□□□ -2.73
VPS13DQ5THJ4 RNY3P8-201ENST00000411366 126 ntBASIC-1.97□□□□□ -2.73
VPS13DQ5THJ4 RNU7-6P-201ENST00000516845 62 ntBASIC-1.97□□□□□ -2.73
VPS13DQ5THJ4 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.98□□□□□ -2.73
VPS13DQ5THJ4 MIR1254-1-201ENST00000408257 97 ntBASIC-1.98□□□□□ -2.73
VPS13DQ5THJ4 U6.81-201ENST00000612550 106 ntBASIC-1.98□□□□□ -2.73
VPS13DQ5THJ4 AL442128.1-201ENST00000615151 90 ntBASIC-1.98□□□□□ -2.73
VPS13DQ5THJ4 SNORD45.2-201ENST00000363552 72 ntBASIC-1.98□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 293.2 ms