Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 RNU6-990P-201ENST00000364385 104 ntBASIC1.89□□□□□ -2.11
RNFT1Q5M7Z0 RNU6-34P-201ENST00000364874 107 ntBASIC1.89□□□□□ -2.11
RNFT1Q5M7Z0 MIR521-2-201ENST00000384818 87 ntBASIC1.89□□□□□ -2.11
RNFT1Q5M7Z0 MIR676-201ENST00000390702 67 ntBASIC1.89□□□□□ -2.11
RNFT1Q5M7Z0 SNORA48.3-201ENST00000391081 134 ntBASIC1.89□□□□□ -2.11
RNFT1Q5M7Z0 AL157398.1-201ENST00000452981 186 ntBASIC1.89□□□□□ -2.11
RNFT1Q5M7Z0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.89□□□□□ -2.11
RNFT1Q5M7Z0 Y_RNA.783-201ENST00000613546 102 ntBASIC1.89□□□□□ -2.11
RNFT1Q5M7Z0 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.89□□□□□ -2.11
RNFT1Q5M7Z0 MIR8063-201ENST00000621930 81 ntBASIC1.89□□□□□ -2.11
RNFT1Q5M7Z0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RNFT1Q5M7Z0 RNU7-104P-201ENST00000459398 79 ntBASIC1.88□□□□□ -2.11
RNFT1Q5M7Z0 AC108210.2-201ENST00000503681 201 ntBASIC1.88□□□□□ -2.11
RNFT1Q5M7Z0 MIR548AD-201ENST00000584780 82 ntBASIC1.88□□□□□ -2.11
RNFT1Q5M7Z0 AC067863.3-201ENST00000624172 122 ntBASIC1.88□□□□□ -2.11
RNFT1Q5M7Z0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
RNFT1Q5M7Z0 RNA5SP99-201ENST00000364020 114 ntBASIC1.87□□□□□ -2.11
RNFT1Q5M7Z0 RNU6-1065P-201ENST00000384513 106 ntBASIC1.87□□□□□ -2.11
RNFT1Q5M7Z0 RNU1-119P-201ENST00000391122 165 ntBASIC1.87□□□□□ -2.11
RNFT1Q5M7Z0 SNORA75.2-201ENST00000391138 150 ntBASIC1.87□□□□□ -2.11
RNFT1Q5M7Z0 SNORA75.3-201ENST00000391231 150 ntBASIC1.87□□□□□ -2.11
RNFT1Q5M7Z0 HMGN2P38-201ENST00000423806 265 ntBASIC1.87□□□□□ -2.11
RNFT1Q5M7Z0 RNU7-56P-201ENST00000458744 62 ntBASIC1.87□□□□□ -2.11
RNFT1Q5M7Z0 RNU1-123P-201ENST00000458950 160 ntBASIC1.87□□□□□ -2.11
RNFT1Q5M7Z0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
RNFT1Q5M7Z0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RNFT1Q5M7Z0 MIR517B-201ENST00000385102 67 ntBASIC1.86□□□□□ -2.11
RNFT1Q5M7Z0 RNU7-119P-201ENST00000459279 63 ntBASIC1.86□□□□□ -2.11
RNFT1Q5M7Z0 RNU6-980P-201ENST00000516925 103 ntBASIC1.86□□□□□ -2.11
RNFT1Q5M7Z0 MIR5002-201ENST00000584713 97 ntBASIC1.86□□□□□ -2.11
RNFT1Q5M7Z0 SNORD114-4-201ENST00000363962 75 ntBASIC1.85□□□□□ -2.11
RNFT1Q5M7Z0 SNORD1A-201ENST00000364968 72 ntBASIC1.85□□□□□ -2.11
RNFT1Q5M7Z0 RNA5SP37-201ENST00000365420 130 ntBASIC1.85□□□□□ -2.11
RNFT1Q5M7Z0 RNU4-52P-201ENST00000384209 138 ntBASIC1.85□□□□□ -2.11
RNFT1Q5M7Z0 MIR548C-201ENST00000384815 97 ntBASIC1.85□□□□□ -2.11
RNFT1Q5M7Z0 MT-TY-201ENST00000387409 66 ntBASIC1.85□□□□□ -2.11
RNFT1Q5M7Z0 RNU6-482P-201ENST00000391068 107 ntBASIC1.85□□□□□ -2.11
RNFT1Q5M7Z0 HMGN2P23-201ENST00000456759 269 ntBASIC1.85□□□□□ -2.11
RNFT1Q5M7Z0 snoU13.9-201ENST00000458927 103 ntBASIC1.85□□□□□ -2.11
RNFT1Q5M7Z0 AC079140.2-201ENST00000506193 142 ntBASIC1.85□□□□□ -2.11
RNFT1Q5M7Z0 RNU7-174P-201ENST00000516248 59 ntBASIC1.85□□□□□ -2.11
RNFT1Q5M7Z0 SNORA44.1-201ENST00000517031 108 ntBASIC1.85□□□□□ -2.11
RNFT1Q5M7Z0 MIRLET7G-201ENST00000362280 84 ntBASIC1.84□□□□□ -2.11
RNFT1Q5M7Z0 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.84□□□□□ -2.11
RNFT1Q5M7Z0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.12
RNFT1Q5M7Z0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
RNFT1Q5M7Z0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
RNFT1Q5M7Z0 RNA5SP489-201ENST00000410986 109 ntBASIC1.83□□□□□ -2.12
RNFT1Q5M7Z0 AC048334.1-201ENST00000477975 159 ntBASIC1.83□□□□□ -2.12
RNFT1Q5M7Z0 RNU6-295P-201ENST00000516901 104 ntBASIC1.83□□□□□ -2.12
RNFT1Q5M7Z0 AC019176.1-201ENST00000518519 225 ntBASIC1.83□□□□□ -2.12
RNFT1Q5M7Z0 AC023827.1-201ENST00000569247 97 ntBASIC1.83□□□□□ -2.12
RNFT1Q5M7Z0 MIR3198-2-201ENST00000577868 80 ntBASIC1.83□□□□□ -2.12
RNFT1Q5M7Z0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.83□□□□□ -2.12
RNFT1Q5M7Z0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RNFT1Q5M7Z0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RNFT1Q5M7Z0 ZNF355P-201ENST00000427301 3216 ntBASIC1.82□□□□□ -2.12
RNFT1Q5M7Z0 SNORD41.1-201ENST00000391000 69 ntBASIC1.82□□□□□ -2.12
RNFT1Q5M7Z0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.82□□□□□ -2.12
RNFT1Q5M7Z0 AC104435.1-201ENST00000483483 166 ntBASIC1.82□□□□□ -2.12
RNFT1Q5M7Z0 MIR6845-201ENST00000613182 61 ntBASIC1.82□□□□□ -2.12
RNFT1Q5M7Z0 U2.7-201ENST00000619197 100 ntBASIC1.82□□□□□ -2.12
RNFT1Q5M7Z0 U4.4-201ENST00000620626 117 ntBASIC1.82□□□□□ -2.12
RNFT1Q5M7Z0 AP000553.5-201ENST00000641933 54 ntBASIC1.82□□□□□ -2.12
RNFT1Q5M7Z0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
RNFT1Q5M7Z0 AC021146.9-201ENST00000512503 156 ntBASIC1.81□□□□□ -2.12
RNFT1Q5M7Z0 RNU6-135P-201ENST00000516769 101 ntBASIC1.81□□□□□ -2.12
RNFT1Q5M7Z0 AL512310.8-201ENST00000550183 120 ntBASIC1.81□□□□□ -2.12
RNFT1Q5M7Z0 MIR4460-201ENST00000577862 86 ntBASIC1.81□□□□□ -2.12
RNFT1Q5M7Z0 MIR3937-201ENST00000580135 106 ntBASIC1.81□□□□□ -2.12
RNFT1Q5M7Z0 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.81□□□□□ -2.12
RNFT1Q5M7Z0 RNU6-35P-201ENST00000384530 107 ntBASIC1.8□□□□□ -2.12
RNFT1Q5M7Z0 SNORA26.9-201ENST00000391322 122 ntBASIC1.8□□□□□ -2.12
RNFT1Q5M7Z0 RNU6-994P-201ENST00000410507 111 ntBASIC1.8□□□□□ -2.12
RNFT1Q5M7Z0 AL591704.2-201ENST00000421658 181 ntBASIC1.8□□□□□ -2.12
RNFT1Q5M7Z0 RNU7-21P-201ENST00000459430 62 ntBASIC1.8□□□□□ -2.12
RNFT1Q5M7Z0 AC008834.1-201ENST00000511612 175 ntBASIC1.8□□□□□ -2.12
RNFT1Q5M7Z0 AL157834.3-201ENST00000615543 103 ntBASIC1.8□□□□□ -2.12
RNFT1Q5M7Z0 SNORA15B-2-201ENST00000384058 135 ntBASIC1.79□□□□□ -2.12
RNFT1Q5M7Z0 SNORA15B-1-201ENST00000384334 135 ntBASIC1.79□□□□□ -2.12
RNFT1Q5M7Z0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.79□□□□□ -2.12
RNFT1Q5M7Z0 SNORA31.2-201ENST00000516019 134 ntBASIC1.79□□□□□ -2.12
RNFT1Q5M7Z0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.79□□□□□ -2.12
RNFT1Q5M7Z0 RNU6-548P-201ENST00000517083 115 ntBASIC1.79□□□□□ -2.12
RNFT1Q5M7Z0 MIR4448-201ENST00000584360 86 ntBASIC1.79□□□□□ -2.12
RNFT1Q5M7Z0 AL353997.5-201ENST00000618886 171 ntBASIC1.79□□□□□ -2.12
RNFT1Q5M7Z0 Y_RNA.363-201ENST00000365529 113 ntBASIC1.78□□□□□ -2.12
RNFT1Q5M7Z0 MIR30A-201ENST00000385092 71 ntBASIC1.78□□□□□ -2.12
RNFT1Q5M7Z0 MIR100-201ENST00000385259 80 ntBASIC1.78□□□□□ -2.12
RNFT1Q5M7Z0 RNU6-930P-201ENST00000390938 100 ntBASIC1.78□□□□□ -2.12
RNFT1Q5M7Z0 AL603825.1-201ENST00000438481 80 ntBASIC1.78□□□□□ -2.12
RNFT1Q5M7Z0 MIR1-1-201ENST00000362147 71 ntBASIC1.77□□□□□ -2.13
RNFT1Q5M7Z0 MIR583-201ENST00000384846 75 ntBASIC1.77□□□□□ -2.13
RNFT1Q5M7Z0 AC003989.2-201ENST00000440224 169 ntBASIC1.77□□□□□ -2.13
RNFT1Q5M7Z0 MIR4639-201ENST00000584938 69 ntBASIC1.77□□□□□ -2.13
RNFT1Q5M7Z0 RNU4-33P-201ENST00000364316 85 ntBASIC1.76□□□□□ -2.13
RNFT1Q5M7Z0 RNA5SP160-201ENST00000364866 120 ntBASIC1.76□□□□□ -2.13
RNFT1Q5M7Z0 SNORA80D-201ENST00000384488 135 ntBASIC1.76□□□□□ -2.13
RNFT1Q5M7Z0 MIR520F-201ENST00000384824 87 ntBASIC1.76□□□□□ -2.13
RNFT1Q5M7Z0 MIR934-201ENST00000401241 83 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 208.4 ms