Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.43□□□□□ -2.48
RFX4Q33E94 MTND5P41-201ENST00000517498 206 ntBASIC-0.43□□□□□ -2.48
RFX4Q33E94 RNU6-235P-201ENST00000362644 107 ntBASIC-0.44□□□□□ -2.48
RFX4Q33E94 RNY4P6-201ENST00000363667 96 ntBASIC-0.44□□□□□ -2.48
RFX4Q33E94 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.44□□□□□ -2.48
RFX4Q33E94 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.44□□□□□ -2.48
RFX4Q33E94 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.44□□□□□ -2.48
RFX4Q33E94 AL590491.3-201ENST00000610731 82 ntBASIC-0.44□□□□□ -2.48
RFX4Q33E94 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.45□□□□□ -2.48
RFX4Q33E94 RNU6-466P-201ENST00000391224 103 ntBASIC-0.45□□□□□ -2.48
RFX4Q33E94 AC007012.1-201ENST00000567192 175 ntBASIC-0.45□□□□□ -2.48
RFX4Q33E94 MIR4432-201ENST00000581823 84 ntBASIC-0.45□□□□□ -2.48
RFX4Q33E94 MIR20A-201ENST00000362279 71 ntBASIC-0.46□□□□□ -2.48
RFX4Q33E94 SNORD58C-201ENST00000365223 64 ntBASIC-0.46□□□□□ -2.48
RFX4Q33E94 snoU13.11-201ENST00000459219 104 ntBASIC-0.46□□□□□ -2.48
RFX4Q33E94 AC025166.1-201ENST00000612411 163 ntBASIC-0.46□□□□□ -2.48
RFX4Q33E94 AL442128.1-201ENST00000615151 90 ntBASIC-0.46□□□□□ -2.48
RFX4Q33E94 MTND5P18-201ENST00000445624 1801 ntBASIC-0.47□□□□□ -2.48
RFX4Q33E94 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.47□□□□□ -2.48
RFX4Q33E94 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.47□□□□□ -2.48
RFX4Q33E94 RNU6-816P-201ENST00000390914 107 ntBASIC-0.47□□□□□ -2.48
RFX4Q33E94 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.47□□□□□ -2.48
RFX4Q33E94 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.47□□□□□ -2.48
RFX4Q33E94 SNORD75.1-201ENST00000408373 60 ntBASIC-0.47□□□□□ -2.48
RFX4Q33E94 RNU6-426P-201ENST00000516464 97 ntBASIC-0.47□□□□□ -2.48
RFX4Q33E94 MIR4696-201ENST00000581431 70 ntBASIC-0.47□□□□□ -2.48
RFX4Q33E94 AP001180.6-201ENST00000584918 159 ntBASIC-0.47□□□□□ -2.48
RFX4Q33E94 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.48□□□□□ -2.49
RFX4Q33E94 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.48□□□□□ -2.49
RFX4Q33E94 SNORD101-201ENST00000384027 73 ntBASIC-0.48□□□□□ -2.49
RFX4Q33E94 RNU6-480P-201ENST00000384332 107 ntBASIC-0.48□□□□□ -2.49
RFX4Q33E94 MIR652-201ENST00000385278 98 ntBASIC-0.48□□□□□ -2.49
RFX4Q33E94 AC114755.3-201ENST00000481111 251 ntBASIC-0.48□□□□□ -2.49
RFX4Q33E94 MIR4436A-201ENST00000585278 85 ntBASIC-0.48□□□□□ -2.49
RFX4Q33E94 AC096720.1-201ENST00000604441 183 ntBASIC-0.48□□□□□ -2.49
RFX4Q33E94 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.49□□□□□ -2.49
RFX4Q33E94 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.49□□□□□ -2.49
RFX4Q33E94 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.49□□□□□ -2.49
RFX4Q33E94 RNU6-886P-201ENST00000384319 105 ntBASIC-0.49□□□□□ -2.49
RFX4Q33E94 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.49□□□□□ -2.49
RFX4Q33E94 RNA5SP451-201ENST00000410588 110 ntBASIC-0.49□□□□□ -2.49
RFX4Q33E94 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.49□□□□□ -2.49
RFX4Q33E94 AC244090.1-201ENST00000441884 93 ntBASIC-0.49□□□□□ -2.49
RFX4Q33E94 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.49□□□□□ -2.49
RFX4Q33E94 RNU6-182P-201ENST00000516970 105 ntBASIC-0.49□□□□□ -2.49
RFX4Q33E94 RNU6-664P-201ENST00000362381 107 ntBASIC-0.5□□□□□ -2.49
RFX4Q33E94 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.5□□□□□ -2.49
RFX4Q33E94 RNU6-455P-201ENST00000384681 107 ntBASIC-0.5□□□□□ -2.49
RFX4Q33E94 MIR1912-201ENST00000410389 80 ntBASIC-0.5□□□□□ -2.49
RFX4Q33E94 SNORD114-14-201ENST00000362723 75 ntBASIC-0.51□□□□□ -2.49
RFX4Q33E94 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.51□□□□□ -2.49
RFX4Q33E94 MIR577-201ENST00000385196 96 ntBASIC-0.51□□□□□ -2.49
RFX4Q33E94 MTND4LP9-201ENST00000427694 174 ntBASIC-0.51□□□□□ -2.49
RFX4Q33E94 RNA5SP66-201ENST00000517178 101 ntBASIC-0.51□□□□□ -2.49
RFX4Q33E94 MIR5589-201ENST00000579442 60 ntBASIC-0.51□□□□□ -2.49
RFX4Q33E94 MIR548O2-201ENST00000616090 70 ntBASIC-0.51□□□□□ -2.49
RFX4Q33E94 AL035470.1-201ENST00000622571 220 ntBASIC-0.51□□□□□ -2.49
RFX4Q33E94 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.51□□□□□ -2.49
RFX4Q33E94 MIR101-1-201ENST00000362265 75 ntBASIC-0.52□□□□□ -2.49
RFX4Q33E94 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.52□□□□□ -2.49
RFX4Q33E94 RNU6-935P-201ENST00000410371 100 ntBASIC-0.52□□□□□ -2.49
RFX4Q33E94 RNU6-75P-201ENST00000515944 104 ntBASIC-0.52□□□□□ -2.49
RFX4Q33E94 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.52□□□□□ -2.49
RFX4Q33E94 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.53□□□□□ -2.49
RFX4Q33E94 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.53□□□□□ -2.49
RFX4Q33E94 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.53□□□□□ -2.49
RFX4Q33E94 SNORA49-201ENST00000386157 136 ntBASIC-0.53□□□□□ -2.49
RFX4Q33E94 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
RFX4Q33E94 SNORD2-201ENST00000459163 69 ntBASIC-0.53□□□□□ -2.49
RFX4Q33E94 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.53□□□□□ -2.49
RFX4Q33E94 RNU6-772P-201ENST00000516042 105 ntBASIC-0.53□□□□□ -2.49
RFX4Q33E94 AC025521.1-201ENST00000621624 286 ntBASIC-0.53□□□□□ -2.49
RFX4Q33E94 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.54□□□□□ -2.5
RFX4Q33E94 MIR9-2-201ENST00000384838 87 ntBASIC-0.54□□□□□ -2.5
RFX4Q33E94 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.54□□□□□ -2.5
RFX4Q33E94 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.54□□□□□ -2.5
RFX4Q33E94 MIR4802-201ENST00000581881 80 ntBASIC-0.54□□□□□ -2.5
RFX4Q33E94 MIR4493-201ENST00000584016 73 ntBASIC-0.54□□□□□ -2.5
RFX4Q33E94 AC145423.2-201ENST00000610631 239 ntBASIC-0.54□□□□□ -2.5
RFX4Q33E94 AC093726.3-201ENST00000637588 150 ntBASIC-0.54□□□□□ -2.5
RFX4Q33E94 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.55□□□□□ -2.5
RFX4Q33E94 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.55□□□□□ -2.5
RFX4Q33E94 RNA5SP169-201ENST00000517268 117 ntBASIC-0.55□□□□□ -2.5
RFX4Q33E94 AP000676.1-201ENST00000533307 52 ntBASIC-0.55□□□□□ -2.5
RFX4Q33E94 MIR3613-201ENST00000579844 87 ntBASIC-0.55□□□□□ -2.5
RFX4Q33E94 SNORD114-4-201ENST00000363962 75 ntBASIC-0.56□□□□□ -2.5
RFX4Q33E94 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.56□□□□□ -2.5
RFX4Q33E94 RNU6-54P-201ENST00000365563 107 ntBASIC-0.56□□□□□ -2.5
RFX4Q33E94 RNU6-900P-201ENST00000384498 102 ntBASIC-0.56□□□□□ -2.5
RFX4Q33E94 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.56□□□□□ -2.5
RFX4Q33E94 RNU6-901P-201ENST00000384593 106 ntBASIC-0.56□□□□□ -2.5
RFX4Q33E94 MIR451A-201ENST00000385059 72 ntBASIC-0.56□□□□□ -2.5
RFX4Q33E94 U3.27-201ENST00000391237 200 ntBASIC-0.56□□□□□ -2.5
RFX4Q33E94 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.56□□□□□ -2.5
RFX4Q33E94 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.56□□□□□ -2.5
RFX4Q33E94 MIR4694-201ENST00000578534 80 ntBASIC-0.56□□□□□ -2.5
RFX4Q33E94 RNU6-832P-201ENST00000363319 107 ntBASIC-0.57□□□□□ -2.5
RFX4Q33E94 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.57□□□□□ -2.5
RFX4Q33E94 MIR604-201ENST00000384880 94 ntBASIC-0.57□□□□□ -2.5
RFX4Q33E94 RNU6-257P-201ENST00000410238 98 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms