Protein–RNA interactions for Protein: P78367

NKX3-2, Homeobox protein Nkx-3.2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2P78367 RNU6-129P-201ENST00000391022 107 ntBASIC1.22□□□□□ -2.21
NKX3-2P78367 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.22□□□□□ -2.21
NKX3-2P78367 RNU6-1265P-201ENST00000516342 103 ntBASIC1.22□□□□□ -2.21
NKX3-2P78367 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
NKX3-2P78367 SNORA63.2-201ENST00000362603 126 ntBASIC1.21□□□□□ -2.22
NKX3-2P78367 RNU6-1335P-201ENST00000365426 107 ntBASIC1.21□□□□□ -2.22
NKX3-2P78367 SNORD101-201ENST00000384027 73 ntBASIC1.21□□□□□ -2.22
NKX3-2P78367 RNU6-1110P-201ENST00000516462 101 ntBASIC1.21□□□□□ -2.22
NKX3-2P78367 MTRNR2L2-201ENST00000604882 87 ntBASIC1.21□□□□□ -2.22
NKX3-2P78367 PVT1_3.1-201ENST00000620853 95 ntBASIC1.21□□□□□ -2.22
NKX3-2P78367 MIR942-201ENST00000401111 86 ntBASIC1.2□□□□□ -2.22
NKX3-2P78367 AC002350.1-201ENST00000490759 375 ntBASIC1.2□□□□□ -2.22
NKX3-2P78367 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.2□□□□□ -2.22
NKX3-2P78367 MIR6515-201ENST00000619843 57 ntBASIC1.2□□□□□ -2.22
NKX3-2P78367 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
NKX3-2P78367 RNU6-161P-201ENST00000363051 106 ntBASIC1.19□□□□□ -2.22
NKX3-2P78367 Y_RNA.239-201ENST00000364444 113 ntBASIC1.19□□□□□ -2.22
NKX3-2P78367 MIR644A-201ENST00000385262 94 ntBASIC1.19□□□□□ -2.22
NKX3-2P78367 SNORD105-201ENST00000386910 85 ntBASIC1.19□□□□□ -2.22
NKX3-2P78367 Y_RNA.596-201ENST00000410462 109 ntBASIC1.19□□□□□ -2.22
NKX3-2P78367 FABP5P4-201ENST00000437203 171 ntBASIC1.19□□□□□ -2.22
NKX3-2P78367 U7.7-201ENST00000459276 60 ntBASIC1.19□□□□□ -2.22
NKX3-2P78367 RNU6-1108P-201ENST00000516308 104 ntBASIC1.19□□□□□ -2.22
NKX3-2P78367 RNA5SP480-201ENST00000516840 109 ntBASIC1.19□□□□□ -2.22
NKX3-2P78367 AL136317.1-201ENST00000612653 226 ntBASIC1.19□□□□□ -2.22
NKX3-2P78367 SNORD115-24-201ENST00000363528 82 ntBASIC1.18□□□□□ -2.22
NKX3-2P78367 SNORD114-26-201ENST00000363543 72 ntBASIC1.18□□□□□ -2.22
NKX3-2P78367 Y_RNA.174-201ENST00000363781 105 ntBASIC1.18□□□□□ -2.22
NKX3-2P78367 MIR7-2-201ENST00000384970 110 ntBASIC1.18□□□□□ -2.22
NKX3-2P78367 RNA5SP404-201ENST00000517118 132 ntBASIC1.18□□□□□ -2.22
NKX3-2P78367 RNU6-315P-201ENST00000362666 107 ntBASIC1.17□□□□□ -2.22
NKX3-2P78367 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.17□□□□□ -2.22
NKX3-2P78367 snoU13.17-201ENST00000458802 104 ntBASIC1.17□□□□□ -2.22
NKX3-2P78367 RNU7-161P-201ENST00000517289 62 ntBASIC1.17□□□□□ -2.22
NKX3-2P78367 RNA5SP403-201ENST00000363598 108 ntBASIC1.16□□□□□ -2.22
NKX3-2P78367 Y_RNA.207-201ENST00000364142 106 ntBASIC1.16□□□□□ -2.22
NKX3-2P78367 MIR200A-201ENST00000384875 90 ntBASIC1.16□□□□□ -2.22
NKX3-2P78367 MIR532-201ENST00000385025 91 ntBASIC1.16□□□□□ -2.22
NKX3-2P78367 RNU6-557P-201ENST00000516842 110 ntBASIC1.16□□□□□ -2.22
NKX3-2P78367 MIR3140-201ENST00000583685 90 ntBASIC1.16□□□□□ -2.22
NKX3-2P78367 SNORD114-21-201ENST00000606412 72 ntBASIC1.16□□□□□ -2.22
NKX3-2P78367 MIR6857-201ENST00000613267 93 ntBASIC1.16□□□□□ -2.22
NKX3-2P78367 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.16□□□□□ -2.22
NKX3-2P78367 RNA5SP117-201ENST00000365294 118 ntBASIC1.15□□□□□ -2.23
NKX3-2P78367 RNU6-1051P-201ENST00000365471 102 ntBASIC1.15□□□□□ -2.23
NKX3-2P78367 AC211469.2-201ENST00000605461 205 ntBASIC1.15□□□□□ -2.23
NKX3-2P78367 MIRLET7A1-201ENST00000362295 80 ntBASIC1.14□□□□□ -2.23
NKX3-2P78367 RNU1-124P-201ENST00000363861 145 ntBASIC1.14□□□□□ -2.23
NKX3-2P78367 RNU4-38P-201ENST00000364472 129 ntBASIC1.14□□□□□ -2.23
NKX3-2P78367 MIR598-201ENST00000384868 97 ntBASIC1.14□□□□□ -2.23
NKX3-2P78367 FGF7P7-201ENST00000514120 227 ntBASIC1.14□□□□□ -2.23
NKX3-2P78367 RNU6-287P-201ENST00000516230 98 ntBASIC1.14□□□□□ -2.23
NKX3-2P78367 RNU6-686P-201ENST00000364839 107 ntBASIC1.13□□□□□ -2.23
NKX3-2P78367 SNORD77.2-201ENST00000391045 68 ntBASIC1.13□□□□□ -2.23
NKX3-2P78367 MIR889-201ENST00000401280 79 ntBASIC1.13□□□□□ -2.23
NKX3-2P78367 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.13□□□□□ -2.23
NKX3-2P78367 RNU6-935P-201ENST00000410371 100 ntBASIC1.13□□□□□ -2.23
NKX3-2P78367 RNU6-1052P-201ENST00000411398 104 ntBASIC1.13□□□□□ -2.23
NKX3-2P78367 RNU7-104P-201ENST00000459398 79 ntBASIC1.13□□□□□ -2.23
NKX3-2P78367 RNU6-719P-201ENST00000516671 104 ntBASIC1.13□□□□□ -2.23
NKX3-2P78367 MIR5000-201ENST00000577717 103 ntBASIC1.13□□□□□ -2.23
NKX3-2P78367 RNU6-208P-201ENST00000362431 107 ntBASIC1.12□□□□□ -2.23
NKX3-2P78367 SNORD114-24-201ENST00000365029 72 ntBASIC1.12□□□□□ -2.23
NKX3-2P78367 MIR573-201ENST00000384964 99 ntBASIC1.12□□□□□ -2.23
NKX3-2P78367 MIR451A-201ENST00000385059 72 ntBASIC1.12□□□□□ -2.23
NKX3-2P78367 RNA5SP255-201ENST00000516370 107 ntBASIC1.12□□□□□ -2.23
NKX3-2P78367 RNU7-13P-201ENST00000516413 62 ntBASIC1.12□□□□□ -2.23
NKX3-2P78367 MIR548AG2-201ENST00000581228 64 ntBASIC1.12□□□□□ -2.23
NKX3-2P78367 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
NKX3-2P78367 MIR3612-201ENST00000579753 87 ntBASIC1.11□□□□□ -2.23
NKX3-2P78367 MIR3973-201ENST00000579824 107 ntBASIC1.11□□□□□ -2.23
NKX3-2P78367 MIR3920-201ENST00000581751 86 ntBASIC1.11□□□□□ -2.23
NKX3-2P78367 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.11□□□□□ -2.23
NKX3-2P78367 Y_RNA.532-201ENST00000384590 113 ntBASIC1.1□□□□□ -2.23
NKX3-2P78367 Y_RNA.660-201ENST00000516002 120 ntBASIC1.1□□□□□ -2.23
NKX3-2P78367 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.1□□□□□ -2.23
NKX3-2P78367 RNU6-1094P-201ENST00000362416 104 ntBASIC1.09□□□□□ -2.23
NKX3-2P78367 RNU6-776P-201ENST00000364403 104 ntBASIC1.09□□□□□ -2.23
NKX3-2P78367 RNU6-1022P-201ENST00000365049 104 ntBASIC1.09□□□□□ -2.23
NKX3-2P78367 SNORD115-44-201ENST00000365391 82 ntBASIC1.09□□□□□ -2.23
NKX3-2P78367 SNORD28-201ENST00000384706 75 ntBASIC1.09□□□□□ -2.23
NKX3-2P78367 SNORD99-201ENST00000408612 74 ntBASIC1.09□□□□□ -2.23
NKX3-2P78367 MIR2113-201ENST00000459007 91 ntBASIC1.09□□□□□ -2.23
NKX3-2P78367 OR2A41P-201ENST00000473586 105 ntBASIC1.09□□□□□ -2.23
NKX3-2P78367 CYP3A137P-201ENST00000562436 69 ntBASIC1.09□□□□□ -2.23
NKX3-2P78367 MIR3678-201ENST00000578455 94 ntBASIC1.09□□□□□ -2.23
NKX3-2P78367 AC025627.3-201ENST00000582078 182 ntBASIC1.09□□□□□ -2.23
NKX3-2P78367 AC244669.1-204ENST00000621564 178 ntBASIC1.09□□□□□ -2.23
NKX3-2P78367 Y_RNA.788-201ENST00000622394 112 ntBASIC1.09□□□□□ -2.23
NKX3-2P78367 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
NKX3-2P78367 RNU5F-1-201ENST00000362507 117 ntBASIC1.08□□□□□ -2.24
NKX3-2P78367 SNORD18A-201ENST00000363753 72 ntBASIC1.08□□□□□ -2.24
NKX3-2P78367 RNU6-1229P-201ENST00000364295 107 ntBASIC1.08□□□□□ -2.24
NKX3-2P78367 RNU6-1126P-201ENST00000384002 107 ntBASIC1.08□□□□□ -2.24
NKX3-2P78367 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
NKX3-2P78367 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
NKX3-2P78367 RNU6-469P-201ENST00000516253 101 ntBASIC1.08□□□□□ -2.24
NKX3-2P78367 MIR4662A-201ENST00000637499 67 ntBASIC1.08□□□□□ -2.24
NKX3-2P78367 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
NKX3-2P78367 RNY4P3-201ENST00000365254 95 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms