Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.81□□□□□ -2.54
VSX2P58304 snoU13.11-201ENST00000459219 104 ntBASIC-0.81□□□□□ -2.54
VSX2P58304 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.81□□□□□ -2.54
VSX2P58304 RNU6-664P-201ENST00000362381 107 ntBASIC-0.82□□□□□ -2.54
VSX2P58304 SNORA63-201ENST00000363450 132 ntBASIC-0.82□□□□□ -2.54
VSX2P58304 RNU6-915P-201ENST00000364943 103 ntBASIC-0.82□□□□□ -2.54
VSX2P58304 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.82□□□□□ -2.54
VSX2P58304 AL118496.2-201ENST00000448300 230 ntBASIC-0.82□□□□□ -2.54
VSX2P58304 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.82□□□□□ -2.54
VSX2P58304 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.82□□□□□ -2.54
VSX2P58304 MIR548O2-201ENST00000616090 70 ntBASIC-0.82□□□□□ -2.54
VSX2P58304 RNU6-235P-201ENST00000362644 107 ntBASIC-0.83□□□□□ -2.54
VSX2P58304 SNORD38.1-201ENST00000363863 68 ntBASIC-0.83□□□□□ -2.54
VSX2P58304 RNU4-36P-201ENST00000364294 144 ntBASIC-0.83□□□□□ -2.54
VSX2P58304 SNORD101-201ENST00000384027 73 ntBASIC-0.83□□□□□ -2.54
VSX2P58304 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.83□□□□□ -2.54
VSX2P58304 SNORD83B-201ENST00000386745 93 ntBASIC-0.83□□□□□ -2.54
VSX2P58304 MIR1302-3-201ENST00000408128 138 ntBASIC-0.83□□□□□ -2.54
VSX2P58304 snoU13.13-201ENST00000458842 104 ntBASIC-0.83□□□□□ -2.54
VSX2P58304 SCARNA17-201ENST00000516183 144 ntBASIC-0.83□□□□□ -2.54
VSX2P58304 RNU6-881P-201ENST00000516813 102 ntBASIC-0.83□□□□□ -2.54
VSX2P58304 MIR4503-201ENST00000582187 83 ntBASIC-0.83□□□□□ -2.54
VSX2P58304 AC072026.1-201ENST00000605023 201 ntBASIC-0.83□□□□□ -2.54
VSX2P58304 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.84□□□□□ -2.54
VSX2P58304 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.84□□□□□ -2.54
VSX2P58304 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.84□□□□□ -2.54
VSX2P58304 MIR548D2-201ENST00000384955 97 ntBASIC-0.84□□□□□ -2.54
VSX2P58304 MIR759-201ENST00000390224 91 ntBASIC-0.84□□□□□ -2.54
VSX2P58304 AL500527.2-201ENST00000454105 95 ntBASIC-0.84□□□□□ -2.54
VSX2P58304 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.84□□□□□ -2.54
VSX2P58304 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.84□□□□□ -2.54
VSX2P58304 AC021146.6-201ENST00000514659 117 ntBASIC-0.84□□□□□ -2.54
VSX2P58304 SNORD38.3-201ENST00000516599 73 ntBASIC-0.84□□□□□ -2.54
VSX2P58304 RNU6-861P-201ENST00000516745 106 ntBASIC-0.84□□□□□ -2.54
VSX2P58304 RNU6-762P-201ENST00000517107 102 ntBASIC-0.84□□□□□ -2.54
VSX2P58304 RNU6-86P-201ENST00000606534 107 ntBASIC-0.84□□□□□ -2.54
VSX2P58304 MIR582-201ENST00000365731 98 ntBASIC-0.85□□□□□ -2.55
VSX2P58304 RNU6-574P-201ENST00000384265 107 ntBASIC-0.85□□□□□ -2.55
VSX2P58304 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.85□□□□□ -2.55
VSX2P58304 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.85□□□□□ -2.55
VSX2P58304 AC097510.1-201ENST00000510945 133 ntBASIC-0.85□□□□□ -2.55
VSX2P58304 RNU6-327P-201ENST00000516270 127 ntBASIC-0.85□□□□□ -2.55
VSX2P58304 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.85□□□□□ -2.55
VSX2P58304 MIR6851-201ENST00000617060 67 ntBASIC-0.85□□□□□ -2.55
VSX2P58304 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.86□□□□□ -2.55
VSX2P58304 RNU6-151P-201ENST00000364158 107 ntBASIC-0.86□□□□□ -2.55
VSX2P58304 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.86□□□□□ -2.55
VSX2P58304 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.86□□□□□ -2.55
VSX2P58304 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.86□□□□□ -2.55
VSX2P58304 RNU6-54P-201ENST00000365563 107 ntBASIC-0.86□□□□□ -2.55
VSX2P58304 RNU6-901P-201ENST00000384593 106 ntBASIC-0.86□□□□□ -2.55
VSX2P58304 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.86□□□□□ -2.55
VSX2P58304 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.86□□□□□ -2.55
VSX2P58304 SNORA13-201ENST00000458790 133 ntBASIC-0.86□□□□□ -2.55
VSX2P58304 RNU7-55P-201ENST00000459426 62 ntBASIC-0.86□□□□□ -2.55
VSX2P58304 SNORA81.3-201ENST00000517283 198 ntBASIC-0.86□□□□□ -2.55
VSX2P58304 SNORD115-25-201ENST00000362619 82 ntBASIC-0.87□□□□□ -2.55
VSX2P58304 RNU6-781P-201ENST00000516377 101 ntBASIC-0.87□□□□□ -2.55
VSX2P58304 MIR4324-201ENST00000584846 72 ntBASIC-0.87□□□□□ -2.55
VSX2P58304 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.88□□□□□ -2.55
VSX2P58304 SNORD114-25-201ENST00000363742 72 ntBASIC-0.88□□□□□ -2.55
VSX2P58304 RNU6-682P-201ENST00000363843 106 ntBASIC-0.88□□□□□ -2.55
VSX2P58304 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.88□□□□□ -2.55
VSX2P58304 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.88□□□□□ -2.55
VSX2P58304 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.88□□□□□ -2.55
VSX2P58304 RNU6-409P-201ENST00000384114 104 ntBASIC-0.88□□□□□ -2.55
VSX2P58304 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.88□□□□□ -2.55
VSX2P58304 MIR204-201ENST00000385200 110 ntBASIC-0.88□□□□□ -2.55
VSX2P58304 RNA5SP136-201ENST00000410906 107 ntBASIC-0.88□□□□□ -2.55
VSX2P58304 RNA5SP67-201ENST00000516422 131 ntBASIC-0.88□□□□□ -2.55
VSX2P58304 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.88□□□□□ -2.55
VSX2P58304 AL627230.5-201ENST00000619807 58 ntBASIC-0.88□□□□□ -2.55
VSX2P58304 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.89□□□□□ -2.55
VSX2P58304 RNU6-466P-201ENST00000391224 103 ntBASIC-0.89□□□□□ -2.55
VSX2P58304 RNU6-721P-201ENST00000410155 105 ntBASIC-0.89□□□□□ -2.55
VSX2P58304 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.89□□□□□ -2.55
VSX2P58304 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.89□□□□□ -2.55
VSX2P58304 AL442128.1-201ENST00000615151 90 ntBASIC-0.89□□□□□ -2.55
VSX2P58304 MIR409-201ENST00000362237 79 ntBASIC-0.9□□□□□ -2.55
VSX2P58304 RNU6-502P-201ENST00000362419 108 ntBASIC-0.9□□□□□ -2.55
VSX2P58304 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.9□□□□□ -2.55
VSX2P58304 MIR548E-201ENST00000408287 88 ntBASIC-0.9□□□□□ -2.55
VSX2P58304 SNORD42B-201ENST00000458893 67 ntBASIC-0.9□□□□□ -2.55
VSX2P58304 RNU6-75P-201ENST00000515944 104 ntBASIC-0.9□□□□□ -2.55
VSX2P58304 RNA5SP470-201ENST00000516463 106 ntBASIC-0.9□□□□□ -2.55
VSX2P58304 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.9□□□□□ -2.55
VSX2P58304 MIR6738-201ENST00000619620 64 ntBASIC-0.9□□□□□ -2.55
VSX2P58304 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.9□□□□□ -2.55
VSX2P58304 RNU6-647P-201ENST00000364243 107 ntBASIC-0.91□□□□□ -2.56
VSX2P58304 RNU6-476P-201ENST00000384726 107 ntBASIC-0.91□□□□□ -2.56
VSX2P58304 RNU6-935P-201ENST00000410371 100 ntBASIC-0.91□□□□□ -2.56
VSX2P58304 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.91□□□□□ -2.56
VSX2P58304 AL158147.1-201ENST00000443970 75 ntBASIC-0.91□□□□□ -2.56
VSX2P58304 RNU6-719P-201ENST00000516671 104 ntBASIC-0.91□□□□□ -2.56
VSX2P58304 MIR451A-201ENST00000385059 72 ntBASIC-0.92□□□□□ -2.56
VSX2P58304 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.92□□□□□ -2.56
VSX2P58304 MIR5704-201ENST00000584029 77 ntBASIC-0.92□□□□□ -2.56
VSX2P58304 MIR4499-201ENST00000584834 69 ntBASIC-0.92□□□□□ -2.56
VSX2P58304 MIR216B-201ENST00000390186 82 ntBASIC-0.93□□□□□ -2.56
VSX2P58304 RNU7-120P-201ENST00000459334 63 ntBASIC-0.93□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 252.7 ms