Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 RNU6-86P-201ENST00000606534 107 ntBASIC-1.03□□□□□ -2.57
ACLYP53396 RNU6-235P-201ENST00000362644 107 ntBASIC-1.04□□□□□ -2.58
ACLYP53396 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.04□□□□□ -2.58
ACLYP53396 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.04□□□□□ -2.58
ACLYP53396 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.04□□□□□ -2.58
ACLYP53396 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.04□□□□□ -2.58
ACLYP53396 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.04□□□□□ -2.58
ACLYP53396 AC022559.1-201ENST00000520905 205 ntBASIC-1.04□□□□□ -2.58
ACLYP53396 RNU4-36P-201ENST00000364294 144 ntBASIC-1.05□□□□□ -2.58
ACLYP53396 MIR606-201ENST00000384851 96 ntBASIC-1.05□□□□□ -2.58
ACLYP53396 MIR759-201ENST00000390224 91 ntBASIC-1.05□□□□□ -2.58
ACLYP53396 AP001094.1-201ENST00000579805 193 ntBASIC-1.05□□□□□ -2.58
ACLYP53396 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.06□□□□□ -2.58
ACLYP53396 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.06□□□□□ -2.58
ACLYP53396 RNU6-935P-201ENST00000410371 100 ntBASIC-1.06□□□□□ -2.58
ACLYP53396 AL353813.1-201ENST00000440700 253 ntBASIC-1.06□□□□□ -2.58
ACLYP53396 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.06□□□□□ -2.58
ACLYP53396 AC130289.1-201ENST00000577321 73 ntBASIC-1.06□□□□□ -2.58
ACLYP53396 RNU6-363P-201ENST00000362895 105 ntBASIC-1.07□□□□□ -2.58
ACLYP53396 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.07□□□□□ -2.58
ACLYP53396 RNU6-973P-201ENST00000364690 107 ntBASIC-1.07□□□□□ -2.58
ACLYP53396 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.07□□□□□ -2.58
ACLYP53396 MIR582-201ENST00000365731 98 ntBASIC-1.07□□□□□ -2.58
ACLYP53396 SNORD83B-201ENST00000386745 93 ntBASIC-1.07□□□□□ -2.58
ACLYP53396 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.07□□□□□ -2.58
ACLYP53396 SCARNA17-201ENST00000516183 144 ntBASIC-1.07□□□□□ -2.58
ACLYP53396 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.07□□□□□ -2.58
ACLYP53396 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.07□□□□□ -2.58
ACLYP53396 AP002392.1-201ENST00000537692 208 ntBASIC-1.07□□□□□ -2.58
ACLYP53396 MTND5P18-201ENST00000445624 1801 ntBASIC-1.08□□□□□ -2.58
ACLYP53396 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.08□□□□□ -2.58
ACLYP53396 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.08□□□□□ -2.58
ACLYP53396 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.08□□□□□ -2.58
ACLYP53396 MIR548D2-201ENST00000384955 97 ntBASIC-1.08□□□□□ -2.58
ACLYP53396 MIR518B-201ENST00000385127 83 ntBASIC-1.08□□□□□ -2.58
ACLYP53396 MIR3179-1-201ENST00000578940 84 ntBASIC-1.08□□□□□ -2.58
ACLYP53396 MIR3179-2-201ENST00000579107 84 ntBASIC-1.08□□□□□ -2.58
ACLYP53396 MIR3179-3-201ENST00000579566 84 ntBASIC-1.08□□□□□ -2.58
ACLYP53396 MIR3179-4-201ENST00000617599 84 ntBASIC-1.08□□□□□ -2.58
ACLYP53396 SNORA20.1-201ENST00000364790 130 ntBASIC-1.09□□□□□ -2.58
ACLYP53396 RNU6-54P-201ENST00000365563 107 ntBASIC-1.09□□□□□ -2.58
ACLYP53396 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.09□□□□□ -2.58
ACLYP53396 MIR548E-201ENST00000408287 88 ntBASIC-1.09□□□□□ -2.58
ACLYP53396 MIR1468-201ENST00000410600 86 ntBASIC-1.09□□□□□ -2.58
ACLYP53396 RNA5SP136-201ENST00000410906 107 ntBASIC-1.09□□□□□ -2.58
ACLYP53396 RN7SKP19-201ENST00000516016 252 ntBASIC-1.09□□□□□ -2.58
ACLYP53396 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.09□□□□□ -2.58
ACLYP53396 RNU6-762P-201ENST00000517107 102 ntBASIC-1.09□□□□□ -2.58
ACLYP53396 AC062037.2-201ENST00000610137 73 ntBASIC-1.09□□□□□ -2.58
ACLYP53396 MTCYBP9-201ENST00000431021 303 ntBASIC-1.1□□□□□ -2.59
ACLYP53396 RNU7-197P-201ENST00000458836 62 ntBASIC-1.1□□□□□ -2.59
ACLYP53396 SNORD114-4-201ENST00000363962 75 ntBASIC-1.11□□□□□ -2.59
ACLYP53396 RNU6-915P-201ENST00000364943 103 ntBASIC-1.11□□□□□ -2.59
ACLYP53396 RNU4-11P-201ENST00000365287 132 ntBASIC-1.11□□□□□ -2.59
ACLYP53396 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.11□□□□□ -2.59
ACLYP53396 RNU6-409P-201ENST00000384114 104 ntBASIC-1.11□□□□□ -2.59
ACLYP53396 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.11□□□□□ -2.59
ACLYP53396 RNU6-476P-201ENST00000384726 107 ntBASIC-1.11□□□□□ -2.59
ACLYP53396 MIR451A-201ENST00000385059 72 ntBASIC-1.11□□□□□ -2.59
ACLYP53396 RNU6-721P-201ENST00000410155 105 ntBASIC-1.11□□□□□ -2.59
ACLYP53396 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.11□□□□□ -2.59
ACLYP53396 AC072026.1-201ENST00000605023 201 ntBASIC-1.11□□□□□ -2.59
ACLYP53396 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.12□□□□□ -2.59
ACLYP53396 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.12□□□□□ -2.59
ACLYP53396 MIR568-201ENST00000385036 95 ntBASIC-1.12□□□□□ -2.59
ACLYP53396 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.12□□□□□ -2.59
ACLYP53396 RNU6-460P-201ENST00000391158 108 ntBASIC-1.12□□□□□ -2.59
ACLYP53396 U3.27-201ENST00000391237 200 ntBASIC-1.12□□□□□ -2.59
ACLYP53396 MIR1263-201ENST00000408324 86 ntBASIC-1.12□□□□□ -2.59
ACLYP53396 AC097510.1-201ENST00000510945 133 ntBASIC-1.12□□□□□ -2.59
ACLYP53396 SNORD22.1-201ENST00000516331 125 ntBASIC-1.12□□□□□ -2.59
ACLYP53396 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.12□□□□□ -2.59
ACLYP53396 MIR5704-201ENST00000584029 77 ntBASIC-1.12□□□□□ -2.59
ACLYP53396 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.13□□□□□ -2.59
ACLYP53396 RNU6-647P-201ENST00000364243 107 ntBASIC-1.13□□□□□ -2.59
ACLYP53396 RNU6-738P-201ENST00000384531 106 ntBASIC-1.13□□□□□ -2.59
ACLYP53396 MIR587-201ENST00000384845 96 ntBASIC-1.13□□□□□ -2.59
ACLYP53396 MIR1302-3-201ENST00000408128 138 ntBASIC-1.13□□□□□ -2.59
ACLYP53396 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.13□□□□□ -2.59
ACLYP53396 AL442128.1-201ENST00000615151 90 ntBASIC-1.13□□□□□ -2.59
ACLYP53396 AC141273.2-201ENST00000618989 130 ntBASIC-1.13□□□□□ -2.59
ACLYP53396 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.14□□□□□ -2.59
ACLYP53396 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.14□□□□□ -2.59
ACLYP53396 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.15□□□□□ -2.59
ACLYP53396 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.15□□□□□ -2.59
ACLYP53396 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.15□□□□□ -2.59
ACLYP53396 SNORD42B-201ENST00000458893 67 ntBASIC-1.15□□□□□ -2.59
ACLYP53396 RNU6-75P-201ENST00000515944 104 ntBASIC-1.15□□□□□ -2.59
ACLYP53396 MIR6854-201ENST00000614935 69 ntBASIC-1.15□□□□□ -2.59
ACLYP53396 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.16□□□□□ -2.6
ACLYP53396 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.16□□□□□ -2.6
ACLYP53396 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.16□□□□□ -2.6
ACLYP53396 AC022137.1-201ENST00000483735 151 ntBASIC-1.16□□□□□ -2.6
ACLYP53396 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.16□□□□□ -2.6
ACLYP53396 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.16□□□□□ -2.6
ACLYP53396 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.16□□□□□ -2.6
ACLYP53396 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.16□□□□□ -2.6
ACLYP53396 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.16□□□□□ -2.6
ACLYP53396 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.16□□□□□ -2.6
ACLYP53396 SNORD74.6-201ENST00000364796 70 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms