Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
CLK3P49761 Y_RNA.174-201ENST00000363781 105 ntBASIC1.1□□□□□ -2.23
CLK3P49761 SNORD115-44-201ENST00000365391 82 ntBASIC1.1□□□□□ -2.23
CLK3P49761 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
CLK3P49761 MIR520F-201ENST00000384824 87 ntBASIC1.09□□□□□ -2.23
CLK3P49761 AC114801.3-201ENST00000510231 177 ntBASIC1.09□□□□□ -2.23
CLK3P49761 RNU6-871P-201ENST00000516122 100 ntBASIC1.09□□□□□ -2.23
CLK3P49761 RNU6-70P-201ENST00000516438 60 ntBASIC1.09□□□□□ -2.23
CLK3P49761 MIR3140-201ENST00000583685 90 ntBASIC1.09□□□□□ -2.23
CLK3P49761 MIR4781-201ENST00000585250 76 ntBASIC1.09□□□□□ -2.23
CLK3P49761 uc_338.16-201ENST00000621804 95 ntBASIC1.09□□□□□ -2.23
CLK3P49761 Y_RNA.36-201ENST00000362602 112 ntBASIC1.08□□□□□ -2.24
CLK3P49761 RNU6-340P-201ENST00000364005 107 ntBASIC1.08□□□□□ -2.24
CLK3P49761 RNU6-681P-201ENST00000364012 104 ntBASIC1.08□□□□□ -2.24
CLK3P49761 SNORA24B-201ENST00000384176 131 ntBASIC1.08□□□□□ -2.24
CLK3P49761 MIR451A-201ENST00000385059 72 ntBASIC1.08□□□□□ -2.24
CLK3P49761 U3.27-201ENST00000391237 200 ntBASIC1.08□□□□□ -2.24
CLK3P49761 RNU2-59P-201ENST00000410482 191 ntBASIC1.08□□□□□ -2.24
CLK3P49761 Y_RNA.606-201ENST00000410579 103 ntBASIC1.08□□□□□ -2.24
CLK3P49761 AC097510.1-201ENST00000510945 133 ntBASIC1.08□□□□□ -2.24
CLK3P49761 SNORA31.14-201ENST00000516728 116 ntBASIC1.08□□□□□ -2.24
CLK3P49761 RNU6-1057P-201ENST00000517162 102 ntBASIC1.08□□□□□ -2.24
CLK3P49761 Y_RNA.32-201ENST00000362589 110 ntBASIC1.07□□□□□ -2.24
CLK3P49761 Y_RNA.327-201ENST00000365201 102 ntBASIC1.07□□□□□ -2.24
CLK3P49761 MIR200A-201ENST00000384875 90 ntBASIC1.07□□□□□ -2.24
CLK3P49761 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
CLK3P49761 MIR942-201ENST00000401111 86 ntBASIC1.07□□□□□ -2.24
CLK3P49761 RNU6-287P-201ENST00000516230 98 ntBASIC1.07□□□□□ -2.24
CLK3P49761 RNU6-1015P-201ENST00000517121 99 ntBASIC1.07□□□□□ -2.24
CLK3P49761 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.07□□□□□ -2.24
CLK3P49761 RMST_2.1-201ENST00000617263 136 ntBASIC1.07□□□□□ -2.24
CLK3P49761 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CLK3P49761 RNA5SP403-201ENST00000363598 108 ntBASIC1.06□□□□□ -2.24
CLK3P49761 Y_RNA.338-201ENST00000365320 114 ntBASIC1.06□□□□□ -2.24
CLK3P49761 Y_RNA.371-201ENST00000365591 113 ntBASIC1.06□□□□□ -2.24
CLK3P49761 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.06□□□□□ -2.24
CLK3P49761 RNU7-13P-201ENST00000516413 62 ntBASIC1.06□□□□□ -2.24
CLK3P49761 RNU6-687P-201ENST00000516443 89 ntBASIC1.06□□□□□ -2.24
CLK3P49761 MIR4498-201ENST00000577599 66 ntBASIC1.06□□□□□ -2.24
CLK3P49761 MIR4295-201ENST00000585286 85 ntBASIC1.06□□□□□ -2.24
CLK3P49761 SNORD115-24-201ENST00000363528 82 ntBASIC1.05□□□□□ -2.24
CLK3P49761 SNORD114-24-201ENST00000365029 72 ntBASIC1.05□□□□□ -2.24
CLK3P49761 RNU6-154P-201ENST00000384306 106 ntBASIC1.05□□□□□ -2.24
CLK3P49761 SNORD124-201ENST00000459577 104 ntBASIC1.05□□□□□ -2.24
CLK3P49761 AC087343.1-201ENST00000477341 475 ntBASIC1.05□□□□□ -2.24
CLK3P49761 U6.81-201ENST00000612550 106 ntBASIC1.05□□□□□ -2.24
CLK3P49761 AL136317.1-201ENST00000612653 226 ntBASIC1.05□□□□□ -2.24
CLK3P49761 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.05□□□□□ -2.24
CLK3P49761 RNA5SP432-201ENST00000362480 116 ntBASIC1.04□□□□□ -2.24
CLK3P49761 RNU6-590P-201ENST00000365039 107 ntBASIC1.04□□□□□ -2.24
CLK3P49761 SNORA8.1-201ENST00000384250 140 ntBASIC1.04□□□□□ -2.24
CLK3P49761 RNU6-587P-201ENST00000391282 106 ntBASIC1.04□□□□□ -2.24
CLK3P49761 RNU6-1052P-201ENST00000411398 104 ntBASIC1.04□□□□□ -2.24
CLK3P49761 RNU6-634P-201ENST00000459134 106 ntBASIC1.04□□□□□ -2.24
CLK3P49761 RNU6-1110P-201ENST00000516462 101 ntBASIC1.04□□□□□ -2.24
CLK3P49761 RNU6-539P-201ENST00000516665 103 ntBASIC1.04□□□□□ -2.24
CLK3P49761 RNU6-719P-201ENST00000516671 104 ntBASIC1.04□□□□□ -2.24
CLK3P49761 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CLK3P49761 FABP5P4-201ENST00000437203 171 ntBASIC1.03□□□□□ -2.24
CLK3P49761 AC002350.1-201ENST00000490759 375 ntBASIC1.03□□□□□ -2.24
CLK3P49761 TRMT112P2-201ENST00000512910 132 ntBASIC1.03□□□□□ -2.24
CLK3P49761 RNU7-161P-201ENST00000517289 62 ntBASIC1.03□□□□□ -2.24
CLK3P49761 MIR664A-201ENST00000626086 82 ntBASIC1.03□□□□□ -2.24
CLK3P49761 RNU6-330P-201ENST00000363015 107 ntBASIC1.02□□□□□ -2.25
CLK3P49761 RNU6-824P-201ENST00000363724 104 ntBASIC1.02□□□□□ -2.25
CLK3P49761 RNU6-1187P-201ENST00000364771 110 ntBASIC1.02□□□□□ -2.25
CLK3P49761 RNU6-1126P-201ENST00000384002 107 ntBASIC1.02□□□□□ -2.25
CLK3P49761 MIR216B-201ENST00000390186 82 ntBASIC1.02□□□□□ -2.25
CLK3P49761 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
CLK3P49761 RNU6-1177P-201ENST00000391058 104 ntBASIC1.02□□□□□ -2.25
CLK3P49761 AL603825.1-201ENST00000438481 80 ntBASIC1.02□□□□□ -2.25
CLK3P49761 MIR2113-201ENST00000459007 91 ntBASIC1.02□□□□□ -2.25
CLK3P49761 RNU6-1053P-201ENST00000515930 101 ntBASIC1.02□□□□□ -2.25
CLK3P49761 RNU6-135P-201ENST00000516769 101 ntBASIC1.02□□□□□ -2.25
CLK3P49761 MIR3920-201ENST00000581751 86 ntBASIC1.02□□□□□ -2.25
CLK3P49761 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
CLK3P49761 MIR337-201ENST00000362281 93 ntBASIC1.01□□□□□ -2.25
CLK3P49761 RNA5SP117-201ENST00000365294 118 ntBASIC1.01□□□□□ -2.25
CLK3P49761 RNU6-1241P-201ENST00000384536 107 ntBASIC1.01□□□□□ -2.25
CLK3P49761 U7.7-201ENST00000459276 60 ntBASIC1.01□□□□□ -2.25
CLK3P49761 MIR3675-201ENST00000583661 73 ntBASIC1.01□□□□□ -2.25
CLK3P49761 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CLK3P49761 MIR617-201ENST00000385030 97 ntBASIC1□□□□□ -2.25
CLK3P49761 SNORD89-201ENST00000390981 114 ntBASIC1□□□□□ -2.25
CLK3P49761 MIR548AG2-201ENST00000581228 64 ntBASIC1□□□□□ -2.25
CLK3P49761 NEAT1_2.1-201ENST00000620525 105 ntBASIC1□□□□□ -2.25
CLK3P49761 AC067863.3-201ENST00000624172 122 ntBASIC1□□□□□ -2.25
CLK3P49761 RNU6-392P-201ENST00000364926 101 ntBASIC0.99□□□□□ -2.25
CLK3P49761 MIR154-201ENST00000385243 84 ntBASIC0.99□□□□□ -2.25
CLK3P49761 SNORD105-201ENST00000386910 85 ntBASIC0.99□□□□□ -2.25
CLK3P49761 RNU7-104P-201ENST00000459398 79 ntBASIC0.99□□□□□ -2.25
CLK3P49761 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.99□□□□□ -2.25
CLK3P49761 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
CLK3P49761 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.98□□□□□ -2.25
CLK3P49761 RNU6-752P-201ENST00000516376 102 ntBASIC0.98□□□□□ -2.25
CLK3P49761 MIR4661-201ENST00000582720 75 ntBASIC0.98□□□□□ -2.25
CLK3P49761 MIR4639-201ENST00000584938 69 ntBASIC0.98□□□□□ -2.25
CLK3P49761 AC103810.9-201ENST00000606688 112 ntBASIC0.98□□□□□ -2.25
CLK3P49761 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
CLK3P49761 RNU6-382P-201ENST00000365181 106 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 220.2 ms