Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 MIR151B-201ENST00000584249 96 ntBASIC1.19□□□□□ -2.22
SLC6A11P48066 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SLC6A11P48066 Y_RNA.36-201ENST00000362602 112 ntBASIC1.18□□□□□ -2.22
SLC6A11P48066 MIR520E-201ENST00000384867 87 ntBASIC1.18□□□□□ -2.22
SLC6A11P48066 Y_RNA.596-201ENST00000410462 109 ntBASIC1.18□□□□□ -2.22
SLC6A11P48066 AC002350.1-201ENST00000490759 375 ntBASIC1.18□□□□□ -2.22
SLC6A11P48066 RNU6-857P-201ENST00000515893 110 ntBASIC1.18□□□□□ -2.22
SLC6A11P48066 RNU6-469P-201ENST00000516253 101 ntBASIC1.18□□□□□ -2.22
SLC6A11P48066 MIR4295-201ENST00000585286 85 ntBASIC1.18□□□□□ -2.22
SLC6A11P48066 MIR6767-201ENST00000637302 66 ntBASIC1.18□□□□□ -2.22
SLC6A11P48066 RNU6-664P-201ENST00000362381 107 ntBASIC1.17□□□□□ -2.22
SLC6A11P48066 SNORD114-24-201ENST00000365029 72 ntBASIC1.17□□□□□ -2.22
SLC6A11P48066 MIR598-201ENST00000384868 97 ntBASIC1.17□□□□□ -2.22
SLC6A11P48066 MIR644A-201ENST00000385262 94 ntBASIC1.17□□□□□ -2.22
SLC6A11P48066 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.17□□□□□ -2.22
SLC6A11P48066 RNU6-1265P-201ENST00000516342 103 ntBASIC1.17□□□□□ -2.22
SLC6A11P48066 MIR4696-201ENST00000581431 70 ntBASIC1.17□□□□□ -2.22
SLC6A11P48066 AL450471.1-201ENST00000447509 127 ntBASIC1.16□□□□□ -2.22
SLC6A11P48066 RPS29P1-201ENST00000465274 159 ntBASIC1.16□□□□□ -2.22
SLC6A11P48066 AC087343.1-201ENST00000477341 475 ntBASIC1.16□□□□□ -2.22
SLC6A11P48066 MIR4712-201ENST00000583750 82 ntBASIC1.16□□□□□ -2.22
SLC6A11P48066 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.15□□□□□ -2.22
SLC6A11P48066 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.22
SLC6A11P48066 RNU6-624P-201ENST00000363411 107 ntBASIC1.15□□□□□ -2.23
SLC6A11P48066 RNU6-24P-201ENST00000384440 107 ntBASIC1.15□□□□□ -2.23
SLC6A11P48066 RNU6-129P-201ENST00000391022 107 ntBASIC1.15□□□□□ -2.23
SLC6A11P48066 RNU7-104P-201ENST00000459398 79 ntBASIC1.15□□□□□ -2.23
SLC6A11P48066 RNU7-13P-201ENST00000516413 62 ntBASIC1.15□□□□□ -2.23
SLC6A11P48066 MIR6788-201ENST00000618842 66 ntBASIC1.15□□□□□ -2.23
SLC6A11P48066 PVT1_3.1-201ENST00000620853 95 ntBASIC1.15□□□□□ -2.23
SLC6A11P48066 Y_RNA.94-201ENST00000363068 106 ntBASIC1.14□□□□□ -2.23
SLC6A11P48066 RNA5SP325-201ENST00000363756 130 ntBASIC1.14□□□□□ -2.23
SLC6A11P48066 RNU1-124P-201ENST00000363861 145 ntBASIC1.14□□□□□ -2.23
SLC6A11P48066 MIR573-201ENST00000384964 99 ntBASIC1.14□□□□□ -2.23
SLC6A11P48066 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.14□□□□□ -2.23
SLC6A11P48066 RNU6-1108P-201ENST00000516308 104 ntBASIC1.14□□□□□ -2.23
SLC6A11P48066 AC025627.3-201ENST00000582078 182 ntBASIC1.14□□□□□ -2.23
SLC6A11P48066 RNU6-315P-201ENST00000362666 107 ntBASIC1.13□□□□□ -2.23
SLC6A11P48066 Y_RNA.244-201ENST00000364484 109 ntBASIC1.13□□□□□ -2.23
SLC6A11P48066 SNORD90-201ENST00000391145 111 ntBASIC1.13□□□□□ -2.23
SLC6A11P48066 RNA5SP255-201ENST00000516370 107 ntBASIC1.13□□□□□ -2.23
SLC6A11P48066 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.13□□□□□ -2.23
SLC6A11P48066 RNU6-161P-201ENST00000363051 106 ntBASIC1.12□□□□□ -2.23
SLC6A11P48066 RNU6-1229P-201ENST00000364295 107 ntBASIC1.12□□□□□ -2.23
SLC6A11P48066 RNU6-935P-201ENST00000410371 100 ntBASIC1.12□□□□□ -2.23
SLC6A11P48066 FGF7P7-201ENST00000514120 227 ntBASIC1.12□□□□□ -2.23
SLC6A11P48066 RNU6-1057P-201ENST00000517162 102 ntBASIC1.12□□□□□ -2.23
SLC6A11P48066 RNU7-161P-201ENST00000517289 62 ntBASIC1.12□□□□□ -2.23
SLC6A11P48066 MIR3612-201ENST00000579753 87 ntBASIC1.12□□□□□ -2.23
SLC6A11P48066 MTRNR2L2-201ENST00000604882 87 ntBASIC1.12□□□□□ -2.23
SLC6A11P48066 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.12□□□□□ -2.23
SLC6A11P48066 SNORA63.2-201ENST00000362603 126 ntBASIC1.11□□□□□ -2.23
SLC6A11P48066 RNU6-478P-201ENST00000363904 110 ntBASIC1.11□□□□□ -2.23
SLC6A11P48066 Y_RNA.207-201ENST00000364142 106 ntBASIC1.11□□□□□ -2.23
SLC6A11P48066 MIR451A-201ENST00000385059 72 ntBASIC1.11□□□□□ -2.23
SLC6A11P48066 SNORD99-201ENST00000408612 74 ntBASIC1.11□□□□□ -2.23
SLC6A11P48066 RNU6-557P-201ENST00000516842 110 ntBASIC1.11□□□□□ -2.23
SLC6A11P48066 AC011195.1-201ENST00000578177 177 ntBASIC1.11□□□□□ -2.23
SLC6A11P48066 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.11□□□□□ -2.23
SLC6A11P48066 RNU5F-1-201ENST00000362507 117 ntBASIC1.1□□□□□ -2.23
SLC6A11P48066 RNA5SP403-201ENST00000363598 108 ntBASIC1.1□□□□□ -2.23
SLC6A11P48066 RNU6-1051P-201ENST00000365471 102 ntBASIC1.1□□□□□ -2.23
SLC6A11P48066 MIR548J-201ENST00000408833 112 ntBASIC1.1□□□□□ -2.23
SLC6A11P48066 RNU6-287P-201ENST00000516230 98 ntBASIC1.1□□□□□ -2.23
SLC6A11P48066 RNU6-135P-201ENST00000516769 101 ntBASIC1.1□□□□□ -2.23
SLC6A11P48066 SNORD114-21-201ENST00000606412 72 ntBASIC1.1□□□□□ -2.23
SLC6A11P48066 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
SLC6A11P48066 SNORD115-44-201ENST00000365391 82 ntBASIC1.09□□□□□ -2.23
SLC6A11P48066 MIR548L-201ENST00000408303 86 ntBASIC1.09□□□□□ -2.23
SLC6A11P48066 Y_RNA.660-201ENST00000516002 120 ntBASIC1.09□□□□□ -2.23
SLC6A11P48066 AC244669.1-204ENST00000621564 178 ntBASIC1.09□□□□□ -2.23
SLC6A11P48066 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.09□□□□□ -2.23
SLC6A11P48066 RNY4P3-201ENST00000365254 95 ntBASIC1.08□□□□□ -2.24
SLC6A11P48066 SNORD77.2-201ENST00000391045 68 ntBASIC1.08□□□□□ -2.24
SLC6A11P48066 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
SLC6A11P48066 RNU6-1052P-201ENST00000411398 104 ntBASIC1.08□□□□□ -2.24
SLC6A11P48066 RNU6-719P-201ENST00000516671 104 ntBASIC1.08□□□□□ -2.24
SLC6A11P48066 MIR3678-201ENST00000578455 94 ntBASIC1.08□□□□□ -2.24
SLC6A11P48066 MIR3140-201ENST00000583685 90 ntBASIC1.08□□□□□ -2.24
SLC6A11P48066 MIR4639-201ENST00000584938 69 ntBASIC1.08□□□□□ -2.24
SLC6A11P48066 AC067863.3-201ENST00000624172 122 ntBASIC1.08□□□□□ -2.24
SLC6A11P48066 RNU6-208P-201ENST00000362431 107 ntBASIC1.07□□□□□ -2.24
SLC6A11P48066 MIRLET7A1-201ENST00000362295 80 ntBASIC1.06□□□□□ -2.24
SLC6A11P48066 SNORD18A-201ENST00000363753 72 ntBASIC1.06□□□□□ -2.24
SLC6A11P48066 RNU6-686P-201ENST00000364839 107 ntBASIC1.06□□□□□ -2.24
SLC6A11P48066 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SLC6A11P48066 SNORD28-201ENST00000384706 75 ntBASIC1.06□□□□□ -2.24
SLC6A11P48066 MIR2113-201ENST00000459007 91 ntBASIC1.06□□□□□ -2.24
SLC6A11P48066 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.06□□□□□ -2.24
SLC6A11P48066 MIR373-201ENST00000362273 69 ntBASIC1.05□□□□□ -2.24
SLC6A11P48066 RNU6-380P-201ENST00000410207 107 ntBASIC1.05□□□□□ -2.24
SLC6A11P48066 MIR3920-201ENST00000581751 86 ntBASIC1.05□□□□□ -2.24
SLC6A11P48066 RNU6-1094P-201ENST00000362416 104 ntBASIC1.04□□□□□ -2.24
SLC6A11P48066 Y_RNA.264-201ENST00000364665 102 ntBASIC1.04□□□□□ -2.24
SLC6A11P48066 RNU6-716P-201ENST00000365621 103 ntBASIC1.04□□□□□ -2.24
SLC6A11P48066 RNU6-1126P-201ENST00000384002 107 ntBASIC1.04□□□□□ -2.24
SLC6A11P48066 RNA5SP222-201ENST00000411039 105 ntBASIC1.04□□□□□ -2.24
SLC6A11P48066 AC244098.3-201ENST00000424803 96 ntBASIC1.04□□□□□ -2.24
SLC6A11P48066 snoU13.17-201ENST00000458802 104 ntBASIC1.04□□□□□ -2.24
SLC6A11P48066 MIR4662A-201ENST00000637499 67 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 272 ms