Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.06□□□□□ -2.42
NEDD4P46934 RNU6-35P-201ENST00000384530 107 ntBASIC-0.06□□□□□ -2.42
NEDD4P46934 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.06□□□□□ -2.42
NEDD4P46934 MIR548A1-201ENST00000385041 97 ntBASIC-0.06□□□□□ -2.42
NEDD4P46934 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
NEDD4P46934 SNORA75.1-201ENST00000391130 148 ntBASIC-0.06□□□□□ -2.42
NEDD4P46934 RNU6-466P-201ENST00000391224 103 ntBASIC-0.06□□□□□ -2.42
NEDD4P46934 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.06□□□□□ -2.42
NEDD4P46934 HMGN2P22-201ENST00000427588 175 ntBASIC-0.06□□□□□ -2.42
NEDD4P46934 AC093423.1-201ENST00000440817 142 ntBASIC-0.06□□□□□ -2.42
NEDD4P46934 MIR2113-201ENST00000459007 91 ntBASIC-0.06□□□□□ -2.42
NEDD4P46934 SNORD33.1-201ENST00000516213 88 ntBASIC-0.06□□□□□ -2.42
NEDD4P46934 RNU6-287P-201ENST00000516230 98 ntBASIC-0.06□□□□□ -2.42
NEDD4P46934 SNORA25.13-201ENST00000516395 103 ntBASIC-0.06□□□□□ -2.42
NEDD4P46934 MIR548AG2-201ENST00000581228 64 ntBASIC-0.06□□□□□ -2.42
NEDD4P46934 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.06□□□□□ -2.42
NEDD4P46934 AC069503.3-201ENST00000618674 145 ntBASIC-0.06□□□□□ -2.42
NEDD4P46934 SNORD114-5-201ENST00000362928 70 ntBASIC-0.07□□□□□ -2.42
NEDD4P46934 U8.6-201ENST00000364939 135 ntBASIC-0.07□□□□□ -2.42
NEDD4P46934 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.07□□□□□ -2.42
NEDD4P46934 MIR593-201ENST00000384856 100 ntBASIC-0.07□□□□□ -2.42
NEDD4P46934 MIR548H2-201ENST00000408874 88 ntBASIC-0.07□□□□□ -2.42
NEDD4P46934 MIR1295B-201ENST00000636144 60 ntBASIC-0.07□□□□□ -2.42
NEDD4P46934 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.08□□□□□ -2.42
NEDD4P46934 RNU6-957P-201ENST00000363652 99 ntBASIC-0.08□□□□□ -2.42
NEDD4P46934 RNU6-302P-201ENST00000365249 107 ntBASIC-0.08□□□□□ -2.42
NEDD4P46934 AC104692.1-201ENST00000472406 90 ntBASIC-0.08□□□□□ -2.42
NEDD4P46934 RNU6-412P-201ENST00000516434 106 ntBASIC-0.08□□□□□ -2.42
NEDD4P46934 MIR3925-201ENST00000584674 77 ntBASIC-0.08□□□□□ -2.42
NEDD4P46934 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.08□□□□□ -2.42
NEDD4P46934 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.08□□□□□ -2.42
NEDD4P46934 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.09□□□□□ -2.42
NEDD4P46934 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.09□□□□□ -2.42
NEDD4P46934 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.09□□□□□ -2.42
NEDD4P46934 RNU6-959P-201ENST00000384671 107 ntBASIC-0.09□□□□□ -2.42
NEDD4P46934 MIR181B2-201ENST00000385004 89 ntBASIC-0.09□□□□□ -2.42
NEDD4P46934 MIR216B-201ENST00000390186 82 ntBASIC-0.09□□□□□ -2.42
NEDD4P46934 AL161932.1-201ENST00000437408 146 ntBASIC-0.09□□□□□ -2.42
NEDD4P46934 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.09□□□□□ -2.42
NEDD4P46934 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.09□□□□□ -2.42
NEDD4P46934 AC084368.1-201ENST00000620935 65 ntBASIC-0.09□□□□□ -2.42
NEDD4P46934 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.1□□□□□ -2.42
NEDD4P46934 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.1□□□□□ -2.42
NEDD4P46934 SNORD45B-201ENST00000364617 72 ntBASIC-0.1□□□□□ -2.42
NEDD4P46934 RNU6-81P-201ENST00000365608 104 ntBASIC-0.1□□□□□ -2.42
NEDD4P46934 RNU6V-201ENST00000384105 107 ntBASIC-0.1□□□□□ -2.42
NEDD4P46934 RNU6-880P-201ENST00000384526 107 ntBASIC-0.1□□□□□ -2.42
NEDD4P46934 MIR548M-201ENST00000408260 86 ntBASIC-0.1□□□□□ -2.42
NEDD4P46934 AC109327.2-201ENST00000448339 378 ntBASIC-0.1□□□□□ -2.42
NEDD4P46934 RNU7-165P-201ENST00000458864 60 ntBASIC-0.1□□□□□ -2.42
NEDD4P46934 RNU7-159P-201ENST00000459284 62 ntBASIC-0.1□□□□□ -2.42
NEDD4P46934 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.1□□□□□ -2.42
NEDD4P46934 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.1□□□□□ -2.42
NEDD4P46934 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.1□□□□□ -2.42
NEDD4P46934 MIR4460-201ENST00000577862 86 ntBASIC-0.1□□□□□ -2.42
NEDD4P46934 AC008267.6-201ENST00000441664 139 ntBASIC-0.11□□□□□ -2.43
NEDD4P46934 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.11□□□□□ -2.43
NEDD4P46934 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.11□□□□□ -2.43
NEDD4P46934 RNU6-180P-201ENST00000516697 61 ntBASIC-0.11□□□□□ -2.43
NEDD4P46934 RNU6-86P-201ENST00000606534 107 ntBASIC-0.11□□□□□ -2.43
NEDD4P46934 uc_338.10-201ENST00000621872 182 ntBASIC-0.11□□□□□ -2.43
NEDD4P46934 U6.100-201ENST00000636230 99 ntBASIC-0.11□□□□□ -2.43
NEDD4P46934 SNORA51.5-201ENST00000384126 131 ntBASIC-0.12□□□□□ -2.43
NEDD4P46934 MIR876-201ENST00000401147 81 ntBASIC-0.12□□□□□ -2.43
NEDD4P46934 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.12□□□□□ -2.43
NEDD4P46934 YWHAEP2-201ENST00000580066 112 ntBASIC-0.12□□□□□ -2.43
NEDD4P46934 RNU6-664P-201ENST00000362381 107 ntBASIC-0.13□□□□□ -2.43
NEDD4P46934 RNU4-36P-201ENST00000364294 144 ntBASIC-0.13□□□□□ -2.43
NEDD4P46934 SNORA32.1-201ENST00000364514 115 ntBASIC-0.13□□□□□ -2.43
NEDD4P46934 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.13□□□□□ -2.43
NEDD4P46934 SNORD101-201ENST00000384027 73 ntBASIC-0.13□□□□□ -2.43
NEDD4P46934 SNORD116-21-201ENST00000384507 92 ntBASIC-0.13□□□□□ -2.43
NEDD4P46934 MIR516B1-201ENST00000385211 90 ntBASIC-0.13□□□□□ -2.43
NEDD4P46934 snoU13.11-201ENST00000459219 104 ntBASIC-0.13□□□□□ -2.43
NEDD4P46934 MT-TY-201ENST00000387409 66 ntBASIC-0.13□□□□□ -2.43
NEDD4P46934 RNA5SP163-201ENST00000410304 99 ntBASIC-0.13□□□□□ -2.43
NEDD4P46934 MIR4696-201ENST00000581431 70 ntBASIC-0.13□□□□□ -2.43
NEDD4P46934 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.13□□□□□ -2.43
NEDD4P46934 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.14□□□□□ -2.43
NEDD4P46934 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.14□□□□□ -2.43
NEDD4P46934 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.14□□□□□ -2.43
NEDD4P46934 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.14□□□□□ -2.43
NEDD4P46934 CR383656.4-201ENST00000546909 122 ntBASIC-0.14□□□□□ -2.43
NEDD4P46934 MIR3613-201ENST00000579844 87 ntBASIC-0.14□□□□□ -2.43
NEDD4P46934 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.15□□□□□ -2.43
NEDD4P46934 RNU6-756P-201ENST00000383997 107 ntBASIC-0.15□□□□□ -2.43
NEDD4P46934 RNU6-813P-201ENST00000384691 107 ntBASIC-0.15□□□□□ -2.43
NEDD4P46934 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.15□□□□□ -2.43
NEDD4P46934 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.15□□□□□ -2.43
NEDD4P46934 MIR5589-201ENST00000579442 60 ntBASIC-0.15□□□□□ -2.43
NEDD4P46934 MIR4636-201ENST00000582271 80 ntBASIC-0.15□□□□□ -2.43
NEDD4P46934 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.15□□□□□ -2.43
NEDD4P46934 AC025521.1-201ENST00000621624 286 ntBASIC-0.15□□□□□ -2.43
NEDD4P46934 MIR148A-201ENST00000362215 68 ntBASIC-0.16□□□□□ -2.44
NEDD4P46934 SNORD114-31-201ENST00000363219 75 ntBASIC-0.16□□□□□ -2.44
NEDD4P46934 RNU6-46P-201ENST00000383860 107 ntBASIC-0.16□□□□□ -2.44
NEDD4P46934 RNU6-644P-201ENST00000391155 98 ntBASIC-0.16□□□□□ -2.44
NEDD4P46934 RNU6-935P-201ENST00000410371 100 ntBASIC-0.16□□□□□ -2.44
NEDD4P46934 RNU6-65P-201ENST00000516332 98 ntBASIC-0.16□□□□□ -2.44
NEDD4P46934 MIR4802-201ENST00000581881 80 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 212.3 ms