Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.79□□□□□ -2.54
BRCA1P38398 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.79□□□□□ -2.54
BRCA1P38398 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.8□□□□□ -2.54
BRCA1P38398 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.8□□□□□ -2.54
BRCA1P38398 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.8□□□□□ -2.54
BRCA1P38398 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.8□□□□□ -2.54
BRCA1P38398 RNU6-409P-201ENST00000384114 104 ntBASIC-0.8□□□□□ -2.54
BRCA1P38398 MTCYBP9-201ENST00000431021 303 ntBASIC-0.8□□□□□ -2.54
BRCA1P38398 MTATP8P1-201ENST00000467115 207 ntBASIC-0.8□□□□□ -2.54
BRCA1P38398 SNORD38.3-201ENST00000516599 73 ntBASIC-0.8□□□□□ -2.54
BRCA1P38398 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.8□□□□□ -2.54
BRCA1P38398 U4.1-201ENST00000620349 87 ntBASIC-0.8□□□□□ -2.54
BRCA1P38398 RNU6-480P-201ENST00000384332 107 ntBASIC-0.8□□□□□ -2.54
BRCA1P38398 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.8□□□□□ -2.54
BRCA1P38398 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.8□□□□□ -2.54
BRCA1P38398 MIR548O2-201ENST00000616090 70 ntBASIC-0.8□□□□□ -2.54
BRCA1P38398 RNU6-502P-201ENST00000362419 108 ntBASIC-0.81□□□□□ -2.54
BRCA1P38398 RNU6-647P-201ENST00000364243 107 ntBASIC-0.81□□□□□ -2.54
BRCA1P38398 SNORA20.1-201ENST00000364790 130 ntBASIC-0.81□□□□□ -2.54
BRCA1P38398 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.81□□□□□ -2.54
BRCA1P38398 MIR518B-201ENST00000385127 83 ntBASIC-0.81□□□□□ -2.54
BRCA1P38398 MIR577-201ENST00000385196 96 ntBASIC-0.81□□□□□ -2.54
BRCA1P38398 AL161932.1-201ENST00000437408 146 ntBASIC-0.81□□□□□ -2.54
BRCA1P38398 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.81□□□□□ -2.54
BRCA1P38398 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.81□□□□□ -2.54
BRCA1P38398 MTND5P18-201ENST00000445624 1801 ntBASIC-0.81□□□□□ -2.54
BRCA1P38398 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.82□□□□□ -2.54
BRCA1P38398 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.82□□□□□ -2.54
BRCA1P38398 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.82□□□□□ -2.54
BRCA1P38398 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.82□□□□□ -2.54
BRCA1P38398 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.82□□□□□ -2.54
BRCA1P38398 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.82□□□□□ -2.54
BRCA1P38398 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.82□□□□□ -2.54
BRCA1P38398 MIR568-201ENST00000385036 95 ntBASIC-0.82□□□□□ -2.54
BRCA1P38398 MIR548G-201ENST00000408442 89 ntBASIC-0.82□□□□□ -2.54
BRCA1P38398 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.82□□□□□ -2.54
BRCA1P38398 SNORD22.1-201ENST00000516331 125 ntBASIC-0.82□□□□□ -2.54
BRCA1P38398 MIR3179-1-201ENST00000578940 84 ntBASIC-0.82□□□□□ -2.54
BRCA1P38398 MIR3179-2-201ENST00000579107 84 ntBASIC-0.82□□□□□ -2.54
BRCA1P38398 MIR3179-3-201ENST00000579566 84 ntBASIC-0.82□□□□□ -2.54
BRCA1P38398 AP001094.1-201ENST00000579805 193 ntBASIC-0.82□□□□□ -2.54
BRCA1P38398 MIR3179-4-201ENST00000617599 84 ntBASIC-0.82□□□□□ -2.54
BRCA1P38398 AC141273.2-201ENST00000618989 130 ntBASIC-0.82□□□□□ -2.54
BRCA1P38398 RNU7-55P-201ENST00000459426 62 ntBASIC-0.82□□□□□ -2.54
BRCA1P38398 SNORD18.2-201ENST00000459604 70 ntBASIC-0.82□□□□□ -2.54
BRCA1P38398 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.82□□□□□ -2.54
BRCA1P38398 MIR3681-201ENST00000580089 72 ntBASIC-0.82□□□□□ -2.54
BRCA1P38398 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.83□□□□□ -2.54
BRCA1P38398 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.83□□□□□ -2.54
BRCA1P38398 RNU6-905P-201ENST00000384434 107 ntBASIC-0.83□□□□□ -2.54
BRCA1P38398 RNU6-881P-201ENST00000516813 102 ntBASIC-0.83□□□□□ -2.54
BRCA1P38398 AC072026.1-201ENST00000605023 201 ntBASIC-0.83□□□□□ -2.54
BRCA1P38398 RNU6-86P-201ENST00000606534 107 ntBASIC-0.83□□□□□ -2.54
BRCA1P38398 MIR8068-201ENST00000618032 68 ntBASIC-0.83□□□□□ -2.54
BRCA1P38398 MIRLET7B-201ENST00000385140 83 ntBASIC-0.84□□□□□ -2.54
BRCA1P38398 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.84□□□□□ -2.54
BRCA1P38398 SNORD37.2-201ENST00000391075 66 ntBASIC-0.84□□□□□ -2.54
BRCA1P38398 MIR1302-3-201ENST00000408128 138 ntBASIC-0.84□□□□□ -2.54
BRCA1P38398 MIR548E-201ENST00000408287 88 ntBASIC-0.84□□□□□ -2.54
BRCA1P38398 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.84□□□□□ -2.54
BRCA1P38398 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.84□□□□□ -2.54
BRCA1P38398 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.84□□□□□ -2.54
BRCA1P38398 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.84□□□□□ -2.54
BRCA1P38398 RNU6-151P-201ENST00000364158 107 ntBASIC-0.84□□□□□ -2.54
BRCA1P38398 snoR1.1-201ENST00000628177 80 ntBASIC-0.84□□□□□ -2.54
BRCA1P38398 RNY4P6-201ENST00000363667 96 ntBASIC-0.85□□□□□ -2.55
BRCA1P38398 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.85□□□□□ -2.55
BRCA1P38398 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.85□□□□□ -2.55
BRCA1P38398 RNU6-460P-201ENST00000391158 108 ntBASIC-0.85□□□□□ -2.55
BRCA1P38398 U3.27-201ENST00000391237 200 ntBASIC-0.85□□□□□ -2.55
BRCA1P38398 RNU6-861P-201ENST00000516745 106 ntBASIC-0.85□□□□□ -2.55
BRCA1P38398 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.85□□□□□ -2.55
BRCA1P38398 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.85□□□□□ -2.55
BRCA1P38398 MIR451A-201ENST00000385059 72 ntBASIC-0.86□□□□□ -2.55
BRCA1P38398 RNU6-466P-201ENST00000391224 103 ntBASIC-0.86□□□□□ -2.55
BRCA1P38398 MIR1263-201ENST00000408324 86 ntBASIC-0.86□□□□□ -2.55
BRCA1P38398 RNU6-721P-201ENST00000410155 105 ntBASIC-0.86□□□□□ -2.55
BRCA1P38398 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.86□□□□□ -2.55
BRCA1P38398 AL445193.1-201ENST00000441183 141 ntBASIC-0.86□□□□□ -2.55
BRCA1P38398 RNU6-327P-201ENST00000516270 127 ntBASIC-0.86□□□□□ -2.55
BRCA1P38398 RNU6-111P-201ENST00000517179 105 ntBASIC-0.86□□□□□ -2.55
BRCA1P38398 SNORA40.17-201ENST00000517256 115 ntBASIC-0.86□□□□□ -2.55
BRCA1P38398 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.86□□□□□ -2.55
BRCA1P38398 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.86□□□□□ -2.55
BRCA1P38398 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.86□□□□□ -2.55
BRCA1P38398 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.86□□□□□ -2.55
BRCA1P38398 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.86□□□□□ -2.55
BRCA1P38398 RNU6-832P-201ENST00000363319 107 ntBASIC-0.87□□□□□ -2.55
BRCA1P38398 RNU4-36P-201ENST00000364294 144 ntBASIC-0.87□□□□□ -2.55
BRCA1P38398 SNORD74.6-201ENST00000364796 70 ntBASIC-0.87□□□□□ -2.55
BRCA1P38398 RNY1P7-201ENST00000384743 110 ntBASIC-0.87□□□□□ -2.55
BRCA1P38398 MIR548D2-201ENST00000384955 97 ntBASIC-0.87□□□□□ -2.55
BRCA1P38398 AP000533.3-201ENST00000447704 118 ntBASIC-0.87□□□□□ -2.55
BRCA1P38398 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.88□□□□□ -2.55
BRCA1P38398 RNU6-495P-201ENST00000362995 107 ntBASIC-0.88□□□□□ -2.55
BRCA1P38398 SNORD50.2-201ENST00000365465 70 ntBASIC-0.88□□□□□ -2.55
BRCA1P38398 RNU6-65P-201ENST00000516332 98 ntBASIC-0.88□□□□□ -2.55
BRCA1P38398 RNA5SP169-201ENST00000517268 117 ntBASIC-0.88□□□□□ -2.55
BRCA1P38398 SNORA81.3-201ENST00000517283 198 ntBASIC-0.88□□□□□ -2.55
BRCA1P38398 SNORA63-201ENST00000363450 132 ntBASIC-0.88□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 214.2 ms