Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RNA5SP136-201ENST00000410906 107 ntBASIC-0.71□□□□□ -2.52
RORAP35398 AC074198.2-201ENST00000508153 258 ntBASIC-0.71□□□□□ -2.52
RORAP35398 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.71□□□□□ -2.52
RORAP35398 RNA5SP66-201ENST00000517178 101 ntBASIC-0.71□□□□□ -2.52
RORAP35398 AC145423.2-201ENST00000610631 239 ntBASIC-0.71□□□□□ -2.52
RORAP35398 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.71□□□□□ -2.52
RORAP35398 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.72□□□□□ -2.52
RORAP35398 RNU4-63P-201ENST00000411313 118 ntBASIC-0.72□□□□□ -2.52
RORAP35398 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.72□□□□□ -2.52
RORAP35398 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.72□□□□□ -2.52
RORAP35398 MIR4696-201ENST00000581431 70 ntBASIC-0.72□□□□□ -2.52
RORAP35398 MIR548O2-201ENST00000616090 70 ntBASIC-0.72□□□□□ -2.52
RORAP35398 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.73□□□□□ -2.53
RORAP35398 AC244090.1-201ENST00000441884 93 ntBASIC-0.73□□□□□ -2.53
RORAP35398 RNU6-781P-201ENST00000516377 101 ntBASIC-0.73□□□□□ -2.53
RORAP35398 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.73□□□□□ -2.53
RORAP35398 MIR3681-201ENST00000580089 72 ntBASIC-0.73□□□□□ -2.53
RORAP35398 RNU6-664P-201ENST00000362381 107 ntBASIC-0.74□□□□□ -2.53
RORAP35398 SNORD114-14-201ENST00000362723 75 ntBASIC-0.74□□□□□ -2.53
RORAP35398 RNU6-647P-201ENST00000364243 107 ntBASIC-0.74□□□□□ -2.53
RORAP35398 SNORD101-201ENST00000384027 73 ntBASIC-0.74□□□□□ -2.53
RORAP35398 SNORD56B-201ENST00000384713 71 ntBASIC-0.74□□□□□ -2.53
RORAP35398 MIR759-201ENST00000390224 91 ntBASIC-0.74□□□□□ -2.53
RORAP35398 snoU13.11-201ENST00000459219 104 ntBASIC-0.74□□□□□ -2.53
RORAP35398 AP000676.1-201ENST00000533307 52 ntBASIC-0.74□□□□□ -2.53
RORAP35398 MIR4436A-201ENST00000585278 85 ntBASIC-0.74□□□□□ -2.53
RORAP35398 AP001340.1-201ENST00000624405 217 ntBASIC-0.74□□□□□ -2.53
RORAP35398 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.75□□□□□ -2.53
RORAP35398 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.75□□□□□ -2.53
RORAP35398 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.75□□□□□ -2.53
RORAP35398 RNA5SP169-201ENST00000517268 117 ntBASIC-0.75□□□□□ -2.53
RORAP35398 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.76□□□□□ -2.53
RORAP35398 RNY4P3-201ENST00000365254 95 ntBASIC-0.76□□□□□ -2.53
RORAP35398 RNU6-409P-201ENST00000384114 104 ntBASIC-0.76□□□□□ -2.53
RORAP35398 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.76□□□□□ -2.53
RORAP35398 RNU6-900P-201ENST00000384498 102 ntBASIC-0.76□□□□□ -2.53
RORAP35398 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.76□□□□□ -2.53
RORAP35398 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.76□□□□□ -2.53
RORAP35398 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.76□□□□□ -2.53
RORAP35398 AL158147.1-201ENST00000443970 75 ntBASIC-0.76□□□□□ -2.53
RORAP35398 RNU6-138P-201ENST00000515952 107 ntBASIC-0.76□□□□□ -2.53
RORAP35398 AP001328.1-201ENST00000528550 176 ntBASIC-0.76□□□□□ -2.53
RORAP35398 RNU6-200P-201ENST00000364743 107 ntBASIC-0.77□□□□□ -2.53
RORAP35398 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.77□□□□□ -2.53
RORAP35398 RNU6-466P-201ENST00000391224 103 ntBASIC-0.77□□□□□ -2.53
RORAP35398 AL442128.1-201ENST00000615151 90 ntBASIC-0.77□□□□□ -2.53
RORAP35398 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.78□□□□□ -2.53
RORAP35398 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.78□□□□□ -2.53
RORAP35398 MT-TQ-201ENST00000387372 72 ntBASIC-0.78□□□□□ -2.53
RORAP35398 RNU6-394P-201ENST00000410735 107 ntBASIC-0.78□□□□□ -2.53
RORAP35398 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.78□□□□□ -2.53
RORAP35398 snoU13.19-201ENST00000459148 104 ntBASIC-0.78□□□□□ -2.53
RORAP35398 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.78□□□□□ -2.53
RORAP35398 AC093726.3-201ENST00000637588 150 ntBASIC-0.78□□□□□ -2.53
RORAP35398 RNU6-379P-201ENST00000363813 104 ntBASIC-0.79□□□□□ -2.54
RORAP35398 MIR582-201ENST00000365731 98 ntBASIC-0.79□□□□□ -2.54
RORAP35398 SNORD116-18-201ENST00000383961 92 ntBASIC-0.79□□□□□ -2.54
RORAP35398 RNU6-463P-201ENST00000384340 107 ntBASIC-0.79□□□□□ -2.54
RORAP35398 SNORA3B-201ENST00000391305 131 ntBASIC-0.79□□□□□ -2.54
RORAP35398 MIR513C-201ENST00000401352 84 ntBASIC-0.79□□□□□ -2.54
RORAP35398 RNU6-935P-201ENST00000410371 100 ntBASIC-0.79□□□□□ -2.54
RORAP35398 AL445193.1-201ENST00000441183 141 ntBASIC-0.79□□□□□ -2.54
RORAP35398 RNU6-75P-201ENST00000515944 104 ntBASIC-0.79□□□□□ -2.54
RORAP35398 MIR4280-201ENST00000582178 76 ntBASIC-0.79□□□□□ -2.54
RORAP35398 SNORD115-25-201ENST00000362619 82 ntBASIC-0.8□□□□□ -2.54
RORAP35398 RNU6-54P-201ENST00000365563 107 ntBASIC-0.8□□□□□ -2.54
RORAP35398 RNU7-55P-201ENST00000459426 62 ntBASIC-0.8□□□□□ -2.54
RORAP35398 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.81□□□□□ -2.54
RORAP35398 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.81□□□□□ -2.54
RORAP35398 MIR216B-201ENST00000390186 82 ntBASIC-0.81□□□□□ -2.54
RORAP35398 RNU6-816P-201ENST00000390914 107 ntBASIC-0.81□□□□□ -2.54
RORAP35398 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.81□□□□□ -2.54
RORAP35398 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.81□□□□□ -2.54
RORAP35398 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.81□□□□□ -2.54
RORAP35398 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.81□□□□□ -2.54
RORAP35398 snoU13.13-201ENST00000458842 104 ntBASIC-0.81□□□□□ -2.54
RORAP35398 AC097510.1-201ENST00000510945 133 ntBASIC-0.81□□□□□ -2.54
RORAP35398 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.81□□□□□ -2.54
RORAP35398 MIR548X2-201ENST00000579776 100 ntBASIC-0.81□□□□□ -2.54
RORAP35398 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.82□□□□□ -2.54
RORAP35398 MIR548E-201ENST00000408287 88 ntBASIC-0.82□□□□□ -2.54
RORAP35398 RNU6-762P-201ENST00000517107 102 ntBASIC-0.82□□□□□ -2.54
RORAP35398 U7.2-201ENST00000607576 63 ntBASIC-0.82□□□□□ -2.54
RORAP35398 AC004792.1-201ENST00000614523 137 ntBASIC-0.82□□□□□ -2.54
RORAP35398 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.83□□□□□ -2.54
RORAP35398 RNY4P6-201ENST00000363667 96 ntBASIC-0.83□□□□□ -2.54
RORAP35398 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.83□□□□□ -2.54
RORAP35398 RNY1P7-201ENST00000384743 110 ntBASIC-0.83□□□□□ -2.54
RORAP35398 MIR451A-201ENST00000385059 72 ntBASIC-0.83□□□□□ -2.54
RORAP35398 MIR569-201ENST00000385228 96 ntBASIC-0.83□□□□□ -2.54
RORAP35398 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.84□□□□□ -2.54
RORAP35398 RNU6-804P-201ENST00000384286 107 ntBASIC-0.84□□□□□ -2.54
RORAP35398 RNU6-901P-201ENST00000384593 106 ntBASIC-0.84□□□□□ -2.54
RORAP35398 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.84□□□□□ -2.54
RORAP35398 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.84□□□□□ -2.54
RORAP35398 RNU6-388P-201ENST00000517012 105 ntBASIC-0.84□□□□□ -2.54
RORAP35398 RNU6-389P-201ENST00000517048 105 ntBASIC-0.84□□□□□ -2.54
RORAP35398 AC025521.1-201ENST00000621624 286 ntBASIC-0.84□□□□□ -2.54
RORAP35398 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.85□□□□□ -2.55
RORAP35398 SNORD58C-201ENST00000365223 64 ntBASIC-0.85□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms