Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 AL136317.1-201ENST00000612653 226 ntBASIC1.79□□□□□ -2.12
GPC1P35052 AC103706.3-201ENST00000636297 85 ntBASIC1.79□□□□□ -2.12
GPC1P35052 RNU6-1039P-201ENST00000383931 107 ntBASIC1.78□□□□□ -2.12
GPC1P35052 MIR216B-201ENST00000390186 82 ntBASIC1.78□□□□□ -2.12
GPC1P35052 SNORA70.22-201ENST00000517160 124 ntBASIC1.78□□□□□ -2.12
GPC1P35052 RNU6-902P-201ENST00000517212 91 ntBASIC1.78□□□□□ -2.12
GPC1P35052 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.78□□□□□ -2.12
GPC1P35052 RNU6-495P-201ENST00000362995 107 ntBASIC1.77□□□□□ -2.13
GPC1P35052 RNU6-499P-201ENST00000365615 107 ntBASIC1.77□□□□□ -2.13
GPC1P35052 MIR617-201ENST00000385030 97 ntBASIC1.77□□□□□ -2.13
GPC1P35052 AL591806.2-201ENST00000433122 173 ntBASIC1.77□□□□□ -2.13
GPC1P35052 MTND4LP1-201ENST00000446263 157 ntBASIC1.77□□□□□ -2.13
GPC1P35052 MIR4769-201ENST00000584126 77 ntBASIC1.77□□□□□ -2.13
GPC1P35052 SNORA16.1-201ENST00000364597 132 ntBASIC1.76□□□□□ -2.13
GPC1P35052 RNU6-54P-201ENST00000365563 107 ntBASIC1.76□□□□□ -2.13
GPC1P35052 RNU6-987P-201ENST00000384759 104 ntBASIC1.76□□□□□ -2.13
GPC1P35052 MIR222-201ENST00000384992 110 ntBASIC1.76□□□□□ -2.13
GPC1P35052 MIR644A-201ENST00000385262 94 ntBASIC1.76□□□□□ -2.13
GPC1P35052 SNORA40.6-201ENST00000391153 128 ntBASIC1.76□□□□□ -2.13
GPC1P35052 MIR1827-201ENST00000408549 66 ntBASIC1.76□□□□□ -2.13
GPC1P35052 RNU1-123P-201ENST00000458950 160 ntBASIC1.76□□□□□ -2.13
GPC1P35052 RMST_2.1-201ENST00000617263 136 ntBASIC1.76□□□□□ -2.13
GPC1P35052 AC069503.3-201ENST00000618674 145 ntBASIC1.76□□□□□ -2.13
GPC1P35052 AC067863.3-201ENST00000624172 122 ntBASIC1.76□□□□□ -2.13
GPC1P35052 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
GPC1P35052 RNU6-668P-201ENST00000364180 107 ntBASIC1.75□□□□□ -2.13
GPC1P35052 RNU6-1187P-201ENST00000364771 110 ntBASIC1.75□□□□□ -2.13
GPC1P35052 MIR519E-201ENST00000385075 84 ntBASIC1.75□□□□□ -2.13
GPC1P35052 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.75□□□□□ -2.13
GPC1P35052 RNU7-24P-201ENST00000458867 62 ntBASIC1.75□□□□□ -2.13
GPC1P35052 RNU6-237P-201ENST00000515985 71 ntBASIC1.75□□□□□ -2.13
GPC1P35052 MIR3122-201ENST00000577243 73 ntBASIC1.75□□□□□ -2.13
GPC1P35052 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
GPC1P35052 RNA5SP117-201ENST00000365294 118 ntBASIC1.74□□□□□ -2.13
GPC1P35052 RNU4-37P-201ENST00000410214 84 ntBASIC1.74□□□□□ -2.13
GPC1P35052 snoU13.23-201ENST00000458863 104 ntBASIC1.74□□□□□ -2.13
GPC1P35052 MIR4285-201ENST00000581001 85 ntBASIC1.74□□□□□ -2.13
GPC1P35052 MIR548O2-201ENST00000616090 70 ntBASIC1.74□□□□□ -2.13
GPC1P35052 MIR548L-201ENST00000408303 86 ntBASIC1.73□□□□□ -2.13
GPC1P35052 AC015712.3-201ENST00000559380 164 ntBASIC1.73□□□□□ -2.13
GPC1P35052 RNU6V-201ENST00000384105 107 ntBASIC1.72□□□□□ -2.13
GPC1P35052 AC108210.2-201ENST00000503681 201 ntBASIC1.71□□□□□ -2.14
GPC1P35052 MIR4419B-201ENST00000577260 68 ntBASIC1.71□□□□□ -2.14
GPC1P35052 RNA5SP99-201ENST00000364020 114 ntBASIC1.7□□□□□ -2.14
GPC1P35052 AC110620.1-201ENST00000416042 228 ntBASIC1.7□□□□□ -2.14
GPC1P35052 AC003989.2-201ENST00000440224 169 ntBASIC1.7□□□□□ -2.14
GPC1P35052 AC002350.1-201ENST00000490759 375 ntBASIC1.7□□□□□ -2.14
GPC1P35052 RNU6-469P-201ENST00000516253 101 ntBASIC1.7□□□□□ -2.14
GPC1P35052 MIR583-201ENST00000384846 75 ntBASIC1.69□□□□□ -2.14
GPC1P35052 SNORD89-201ENST00000390981 114 ntBASIC1.69□□□□□ -2.14
GPC1P35052 RNA5SP182-201ENST00000516064 82 ntBASIC1.69□□□□□ -2.14
GPC1P35052 MIR3657-201ENST00000584818 117 ntBASIC1.69□□□□□ -2.14
GPC1P35052 MIR633-201ENST00000384821 98 ntBASIC1.68□□□□□ -2.14
GPC1P35052 AC002429.1-201ENST00000437672 148 ntBASIC1.68□□□□□ -2.14
GPC1P35052 SNORD42B-201ENST00000458893 67 ntBASIC1.68□□□□□ -2.14
GPC1P35052 AC244669.1-204ENST00000621564 178 ntBASIC1.68□□□□□ -2.14
GPC1P35052 AC073869.9-201ENST00000641610 120 ntBASIC1.68□□□□□ -2.14
GPC1P35052 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
GPC1P35052 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
GPC1P35052 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.67□□□□□ -2.14
GPC1P35052 SNORA7.1-201ENST00000363750 139 ntBASIC1.67□□□□□ -2.14
GPC1P35052 RNU6-645P-201ENST00000364649 106 ntBASIC1.67□□□□□ -2.14
GPC1P35052 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.67□□□□□ -2.14
GPC1P35052 RNU7-74P-201ENST00000459104 62 ntBASIC1.67□□□□□ -2.14
GPC1P35052 RNA5SP147-201ENST00000516493 109 ntBASIC1.67□□□□□ -2.14
GPC1P35052 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.67□□□□□ -2.14
GPC1P35052 RNU6-260P-201ENST00000384092 107 ntBASIC1.66□□□□□ -2.14
GPC1P35052 MIR9-3-201ENST00000385084 90 ntBASIC1.66□□□□□ -2.14
GPC1P35052 SNORD12-201ENST00000391002 90 ntBASIC1.66□□□□□ -2.14
GPC1P35052 RNU6-135P-201ENST00000516769 101 ntBASIC1.65□□□□□ -2.15
GPC1P35052 RNU6-295P-201ENST00000516901 104 ntBASIC1.65□□□□□ -2.15
GPC1P35052 MIR4639-201ENST00000584938 69 ntBASIC1.65□□□□□ -2.15
GPC1P35052 MIR6845-201ENST00000613182 61 ntBASIC1.65□□□□□ -2.15
GPC1P35052 SNORD48-201ENST00000364953 64 ntBASIC1.64□□□□□ -2.15
GPC1P35052 RNU6-716P-201ENST00000365621 103 ntBASIC1.64□□□□□ -2.15
GPC1P35052 SNORD28-201ENST00000384706 75 ntBASIC1.64□□□□□ -2.15
GPC1P35052 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.64□□□□□ -2.15
GPC1P35052 MIR4460-201ENST00000577862 86 ntBASIC1.64□□□□□ -2.15
GPC1P35052 RNU6-482P-201ENST00000391068 107 ntBASIC1.63□□□□□ -2.15
GPC1P35052 RNU6-542P-201ENST00000516405 103 ntBASIC1.63□□□□□ -2.15
GPC1P35052 AC084768.2-201ENST00000622736 221 ntBASIC1.63□□□□□ -2.15
GPC1P35052 RNU6-990P-201ENST00000364385 104 ntBASIC1.62□□□□□ -2.15
GPC1P35052 SNORA25-201ENST00000384384 134 ntBASIC1.62□□□□□ -2.15
GPC1P35052 RNU6-548P-201ENST00000517083 115 ntBASIC1.62□□□□□ -2.15
GPC1P35052 AL353997.5-201ENST00000618886 171 ntBASIC1.62□□□□□ -2.15
GPC1P35052 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
GPC1P35052 RNA5SP327-201ENST00000362494 101 ntBASIC1.61□□□□□ -2.15
GPC1P35052 RNA5SP363-201ENST00000365072 115 ntBASIC1.61□□□□□ -2.15
GPC1P35052 RNU6-669P-201ENST00000365575 107 ntBASIC1.61□□□□□ -2.15
GPC1P35052 Y_RNA.375-201ENST00000365625 101 ntBASIC1.61□□□□□ -2.15
GPC1P35052 MIR7-2-201ENST00000384970 110 ntBASIC1.61□□□□□ -2.15
GPC1P35052 SNORD105-201ENST00000386910 85 ntBASIC1.61□□□□□ -2.15
GPC1P35052 AL603825.1-201ENST00000438481 80 ntBASIC1.61□□□□□ -2.15
GPC1P35052 AC092634.7-201ENST00000621022 103 ntBASIC1.61□□□□□ -2.15
GPC1P35052 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
GPC1P35052 SNORA2.1-201ENST00000363089 137 ntBASIC1.6□□□□□ -2.15
GPC1P35052 RNU6-614P-201ENST00000384369 107 ntBASIC1.6□□□□□ -2.15
GPC1P35052 MT-TY-201ENST00000387409 66 ntBASIC1.6□□□□□ -2.15
GPC1P35052 SNORD41.1-201ENST00000391000 69 ntBASIC1.6□□□□□ -2.15
GPC1P35052 SNORA26.9-201ENST00000391322 122 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 194.7 ms