Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC108081.1-201ENST00000604358 221 ntBASIC-1.87□□□□□ -2.71
CCL1P22362 RNU6-508P-201ENST00000363231 103 ntBASIC-1.88□□□□□ -2.71
CCL1P22362 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.88□□□□□ -2.71
CCL1P22362 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.88□□□□□ -2.71
CCL1P22362 FGF7P7-201ENST00000514120 227 ntBASIC-1.88□□□□□ -2.71
CCL1P22362 RNU6-75P-201ENST00000515944 104 ntBASIC-1.88□□□□□ -2.71
CCL1P22362 RNU6-719P-201ENST00000516671 104 ntBASIC-1.88□□□□□ -2.71
CCL1P22362 MIR4308-201ENST00000580634 81 ntBASIC-1.88□□□□□ -2.71
CCL1P22362 AL353803.5-201ENST00000599815 141 ntBASIC-1.88□□□□□ -2.71
CCL1P22362 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.88□□□□□ -2.71
CCL1P22362 RNU6-924P-201ENST00000362926 108 ntBASIC-1.89□□□□□ -2.71
CCL1P22362 MT-TI-201ENST00000387365 69 ntBASIC-1.89□□□□□ -2.71
CCL1P22362 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.89□□□□□ -2.71
CCL1P22362 MIR3115-201ENST00000577915 68 ntBASIC-1.89□□□□□ -2.71
CCL1P22362 RNU6-576P-201ENST00000390854 102 ntBASIC-1.9□□□□□ -2.71
CCL1P22362 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.9□□□□□ -2.71
CCL1P22362 MIR4464-201ENST00000580818 92 ntBASIC-1.9□□□□□ -2.71
CCL1P22362 MIR4536-1-201ENST00000583537 88 ntBASIC-1.9□□□□□ -2.71
CCL1P22362 MIR4795-201ENST00000584182 89 ntBASIC-1.9□□□□□ -2.71
CCL1P22362 AL445584.3-201ENST00000617173 78 ntBASIC-1.9□□□□□ -2.71
CCL1P22362 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.91□□□□□ -2.72
CCL1P22362 RNA5SP67-201ENST00000516422 131 ntBASIC-1.91□□□□□ -2.72
CCL1P22362 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.91□□□□□ -2.72
CCL1P22362 SNORA63.2-201ENST00000362603 126 ntBASIC-1.92□□□□□ -2.72
CCL1P22362 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.92□□□□□ -2.72
CCL1P22362 SNORD115-33-201ENST00000363723 82 ntBASIC-1.92□□□□□ -2.72
CCL1P22362 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.92□□□□□ -2.72
CCL1P22362 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.92□□□□□ -2.72
CCL1P22362 RNU6-409P-201ENST00000384114 104 ntBASIC-1.92□□□□□ -2.72
CCL1P22362 RNU7-24P-201ENST00000458867 62 ntBASIC-1.92□□□□□ -2.72
CCL1P22362 AL442128.1-201ENST00000615151 90 ntBASIC-1.92□□□□□ -2.72
CCL1P22362 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.93□□□□□ -2.72
CCL1P22362 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.93□□□□□ -2.72
CCL1P22362 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.93□□□□□ -2.72
CCL1P22362 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.93□□□□□ -2.72
CCL1P22362 MIR1302-6-201ENST00000408466 90 ntBASIC-1.93□□□□□ -2.72
CCL1P22362 RBMX2P4-201ENST00000441256 376 ntBASIC-1.93□□□□□ -2.72
CCL1P22362 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.93□□□□□ -2.72
CCL1P22362 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.93□□□□□ -2.72
CCL1P22362 MIR4680-201ENST00000580906 66 ntBASIC-1.93□□□□□ -2.72
CCL1P22362 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.93□□□□□ -2.72
CCL1P22362 RNU6-312P-201ENST00000364629 107 ntBASIC-1.94□□□□□ -2.72
CCL1P22362 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.94□□□□□ -2.72
CCL1P22362 RNU4-61P-201ENST00000411243 107 ntBASIC-1.94□□□□□ -2.72
CCL1P22362 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.94□□□□□ -2.72
CCL1P22362 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.94□□□□□ -2.72
CCL1P22362 MIR6888-201ENST00000621977 67 ntBASIC-1.94□□□□□ -2.72
CCL1P22362 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.95□□□□□ -2.72
CCL1P22362 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.95□□□□□ -2.72
CCL1P22362 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.95□□□□□ -2.72
CCL1P22362 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.95□□□□□ -2.72
CCL1P22362 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.95□□□□□ -2.72
CCL1P22362 RNU6-474P-201ENST00000384243 107 ntBASIC-1.95□□□□□ -2.72
CCL1P22362 MIR548D2-201ENST00000384955 97 ntBASIC-1.95□□□□□ -2.72
CCL1P22362 SNORA26.4-201ENST00000391188 123 ntBASIC-1.95□□□□□ -2.72
CCL1P22362 MIR6818-201ENST00000621576 65 ntBASIC-1.95□□□□□ -2.72
CCL1P22362 MIR409-201ENST00000362237 79 ntBASIC-1.96□□□□□ -2.72
CCL1P22362 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.96□□□□□ -2.72
CCL1P22362 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.96□□□□□ -2.72
CCL1P22362 MT-TD-201ENST00000387419 68 ntBASIC-1.96□□□□□ -2.72
CCL1P22362 SNORD75.2-201ENST00000408784 58 ntBASIC-1.96□□□□□ -2.72
CCL1P22362 RNA5SP136-201ENST00000410906 107 ntBASIC-1.96□□□□□ -2.72
CCL1P22362 MIR4320-201ENST00000636981 65 ntBASIC-1.96□□□□□ -2.72
CCL1P22362 RNU6-990P-201ENST00000364385 104 ntBASIC-1.97□□□□□ -2.72
CCL1P22362 MIR548A1-201ENST00000385041 97 ntBASIC-1.97□□□□□ -2.72
CCL1P22362 MIR548U-201ENST00000390728 81 ntBASIC-1.97□□□□□ -2.72
CCL1P22362 SNORD37.2-201ENST00000391075 66 ntBASIC-1.97□□□□□ -2.72
CCL1P22362 MIR548H3-201ENST00000408771 118 ntBASIC-1.97□□□□□ -2.72
CCL1P22362 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.97□□□□□ -2.72
CCL1P22362 HAR1A.1-201ENST00000459583 118 ntBASIC-1.97□□□□□ -2.72
CCL1P22362 SNORD50.2-201ENST00000365465 70 ntBASIC-1.98□□□□□ -2.73
CCL1P22362 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.98□□□□□ -2.73
CCL1P22362 MIR527-201ENST00000385244 85 ntBASIC-1.98□□□□□ -2.73
CCL1P22362 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.98□□□□□ -2.73
CCL1P22362 AC068339.1-201ENST00000526965 141 ntBASIC-1.98□□□□□ -2.73
CCL1P22362 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.99□□□□□ -2.73
CCL1P22362 RNU6-985P-201ENST00000410182 104 ntBASIC-1.99□□□□□ -2.73
CCL1P22362 Y_RNA.419-201ENST00000384041 102 ntBASIC-2□□□□□ -2.73
CCL1P22362 Y_RNA.461-201ENST00000384263 103 ntBASIC-2□□□□□ -2.73
CCL1P22362 Y_RNA.483-201ENST00000384380 101 ntBASIC-2□□□□□ -2.73
CCL1P22362 MIR8062-201ENST00000621515 85 ntBASIC-2□□□□□ -2.73
CCL1P22362 AC134503.1-201ENST00000633048 54 ntBASIC-2□□□□□ -2.73
CCL1P22362 Y_RNA.250-201ENST00000364542 110 ntBASIC-2.01□□□□□ -2.73
CCL1P22362 RNU6-1318P-201ENST00000365389 103 ntBASIC-2.01□□□□□ -2.73
CCL1P22362 MT-TW-201ENST00000387382 68 ntBASIC-2.01□□□□□ -2.73
CCL1P22362 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.01□□□□□ -2.73
CCL1P22362 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-2.01□□□□□ -2.73
CCL1P22362 AC022028.1-201ENST00000412054 408 ntBASIC-2.01□□□□□ -2.73
CCL1P22362 SNORD63.1-201ENST00000516178 80 ntBASIC-2.01□□□□□ -2.73
CCL1P22362 AC130289.1-201ENST00000577321 73 ntBASIC-2.01□□□□□ -2.73
CCL1P22362 AC090617.8-201ENST00000623339 167 ntBASIC-2.01□□□□□ -2.73
CCL1P22362 RNU4-32P-201ENST00000363404 141 ntBASIC-2.02□□□□□ -2.73
CCL1P22362 RNU6-746P-201ENST00000384112 109 ntBASIC-2.02□□□□□ -2.73
CCL1P22362 RNU6-239P-201ENST00000390990 99 ntBASIC-2.02□□□□□ -2.73
CCL1P22362 MTND5P20-201ENST00000448677 143 ntBASIC-2.02□□□□□ -2.73
CCL1P22362 MIR3121-201ENST00000579680 77 ntBASIC-2.02□□□□□ -2.73
CCL1P22362 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.02□□□□□ -2.73
CCL1P22362 AC025521.1-201ENST00000621624 286 ntBASIC-2.02□□□□□ -2.73
CCL1P22362 Y_RNA.163-201ENST00000363702 113 ntBASIC-2.03□□□□□ -2.73
CCL1P22362 SNORA24B-201ENST00000384176 131 ntBASIC-2.03□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 181.1 ms