Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RNU6-466P-201ENST00000391224 103 ntBASIC-1.08□□□□□ -2.58
HLA-DPA1P20036 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.08□□□□□ -2.58
HLA-DPA1P20036 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.08□□□□□ -2.58
HLA-DPA1P20036 MIR6851-201ENST00000617060 67 ntBASIC-1.08□□□□□ -2.58
HLA-DPA1P20036 AC141273.2-201ENST00000618989 130 ntBASIC-1.08□□□□□ -2.58
HLA-DPA1P20036 RNU6-363P-201ENST00000362895 105 ntBASIC-1.09□□□□□ -2.58
HLA-DPA1P20036 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.09□□□□□ -2.58
HLA-DPA1P20036 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.09□□□□□ -2.58
HLA-DPA1P20036 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.09□□□□□ -2.58
HLA-DPA1P20036 MIR548D2-201ENST00000384955 97 ntBASIC-1.09□□□□□ -2.58
HLA-DPA1P20036 RNU7-197P-201ENST00000458836 62 ntBASIC-1.09□□□□□ -2.58
HLA-DPA1P20036 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.09□□□□□ -2.58
HLA-DPA1P20036 RNU6-881P-201ENST00000516813 102 ntBASIC-1.09□□□□□ -2.58
HLA-DPA1P20036 MIR548AX-201ENST00000580117 73 ntBASIC-1.09□□□□□ -2.58
HLA-DPA1P20036 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.1□□□□□ -2.59
HLA-DPA1P20036 RNU6-647P-201ENST00000364243 107 ntBASIC-1.1□□□□□ -2.59
HLA-DPA1P20036 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.1□□□□□ -2.59
HLA-DPA1P20036 snoU13.13-201ENST00000458842 104 ntBASIC-1.1□□□□□ -2.59
HLA-DPA1P20036 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.1□□□□□ -2.59
HLA-DPA1P20036 RNU6-664P-201ENST00000362381 107 ntBASIC-1.11□□□□□ -2.59
HLA-DPA1P20036 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.11□□□□□ -2.59
HLA-DPA1P20036 SNORA49-201ENST00000386157 136 ntBASIC-1.11□□□□□ -2.59
HLA-DPA1P20036 MIR3681-201ENST00000580089 72 ntBASIC-1.11□□□□□ -2.59
HLA-DPA1P20036 MIR4696-201ENST00000581431 70 ntBASIC-1.11□□□□□ -2.59
HLA-DPA1P20036 AC145423.2-201ENST00000610631 239 ntBASIC-1.11□□□□□ -2.59
HLA-DPA1P20036 RNU6-151P-201ENST00000364158 107 ntBASIC-1.12□□□□□ -2.59
HLA-DPA1P20036 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.12□□□□□ -2.59
HLA-DPA1P20036 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.12□□□□□ -2.59
HLA-DPA1P20036 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.12□□□□□ -2.59
HLA-DPA1P20036 AP001328.1-201ENST00000528550 176 ntBASIC-1.12□□□□□ -2.59
HLA-DPA1P20036 MIR548O2-201ENST00000616090 70 ntBASIC-1.12□□□□□ -2.59
HLA-DPA1P20036 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.13□□□□□ -2.59
HLA-DPA1P20036 RNU4-36P-201ENST00000364294 144 ntBASIC-1.13□□□□□ -2.59
HLA-DPA1P20036 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.13□□□□□ -2.59
HLA-DPA1P20036 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.13□□□□□ -2.59
HLA-DPA1P20036 RNU6-409P-201ENST00000384114 104 ntBASIC-1.13□□□□□ -2.59
HLA-DPA1P20036 RNY1P7-201ENST00000384743 110 ntBASIC-1.13□□□□□ -2.59
HLA-DPA1P20036 RNU6-138P-201ENST00000515952 107 ntBASIC-1.13□□□□□ -2.59
HLA-DPA1P20036 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.13□□□□□ -2.59
HLA-DPA1P20036 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.14□□□□□ -2.59
HLA-DPA1P20036 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.14□□□□□ -2.59
HLA-DPA1P20036 RNU6-30P-201ENST00000384561 107 ntBASIC-1.14□□□□□ -2.59
HLA-DPA1P20036 MIR196A1-201ENST00000388006 70 ntBASIC-1.14□□□□□ -2.59
HLA-DPA1P20036 RNU6-721P-201ENST00000410155 105 ntBASIC-1.14□□□□□ -2.59
HLA-DPA1P20036 RNU7-55P-201ENST00000459426 62 ntBASIC-1.14□□□□□ -2.59
HLA-DPA1P20036 RNU6-861P-201ENST00000516745 106 ntBASIC-1.14□□□□□ -2.59
HLA-DPA1P20036 MIR4503-201ENST00000582187 83 ntBASIC-1.14□□□□□ -2.59
HLA-DPA1P20036 SNORD115-25-201ENST00000362619 82 ntBASIC-1.15□□□□□ -2.59
HLA-DPA1P20036 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.15□□□□□ -2.59
HLA-DPA1P20036 MIR513C-201ENST00000401352 84 ntBASIC-1.15□□□□□ -2.59
HLA-DPA1P20036 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.15□□□□□ -2.59
HLA-DPA1P20036 AL353813.1-201ENST00000440700 253 ntBASIC-1.15□□□□□ -2.59
HLA-DPA1P20036 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.15□□□□□ -2.59
HLA-DPA1P20036 MTND5P18-201ENST00000445624 1801 ntBASIC-1.16□□□□□ -2.6
HLA-DPA1P20036 RNU6-196P-201ENST00000384315 107 ntBASIC-1.16□□□□□ -2.6
HLA-DPA1P20036 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
HLA-DPA1P20036 RNU6-935P-201ENST00000410371 100 ntBASIC-1.16□□□□□ -2.6
HLA-DPA1P20036 SNORA13-201ENST00000458790 133 ntBASIC-1.16□□□□□ -2.6
HLA-DPA1P20036 SNORD2-201ENST00000459163 69 ntBASIC-1.16□□□□□ -2.6
HLA-DPA1P20036 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.16□□□□□ -2.6
HLA-DPA1P20036 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.16□□□□□ -2.6
HLA-DPA1P20036 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.17□□□□□ -2.6
HLA-DPA1P20036 snoU13.11-201ENST00000459219 104 ntBASIC-1.17□□□□□ -2.6
HLA-DPA1P20036 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.17□□□□□ -2.6
HLA-DPA1P20036 AL442128.1-201ENST00000615151 90 ntBASIC-1.17□□□□□ -2.6
HLA-DPA1P20036 RNU6-235P-201ENST00000362644 107 ntBASIC-1.18□□□□□ -2.6
HLA-DPA1P20036 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.18□□□□□ -2.6
HLA-DPA1P20036 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.18□□□□□ -2.6
HLA-DPA1P20036 MIR3179-1-201ENST00000578940 84 ntBASIC-1.18□□□□□ -2.6
HLA-DPA1P20036 MIR3179-2-201ENST00000579107 84 ntBASIC-1.18□□□□□ -2.6
HLA-DPA1P20036 MIR3179-3-201ENST00000579566 84 ntBASIC-1.18□□□□□ -2.6
HLA-DPA1P20036 MIR3179-4-201ENST00000617599 84 ntBASIC-1.18□□□□□ -2.6
HLA-DPA1P20036 RNU6-502P-201ENST00000362419 108 ntBASIC-1.19□□□□□ -2.6
HLA-DPA1P20036 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.19□□□□□ -2.6
HLA-DPA1P20036 RNU7-120P-201ENST00000459334 63 ntBASIC-1.19□□□□□ -2.6
HLA-DPA1P20036 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.19□□□□□ -2.6
HLA-DPA1P20036 SNORA40.17-201ENST00000517256 115 ntBASIC-1.19□□□□□ -2.6
HLA-DPA1P20036 AP001340.1-201ENST00000624405 217 ntBASIC-1.19□□□□□ -2.6
HLA-DPA1P20036 RNY4P6-201ENST00000363667 96 ntBASIC-1.2□□□□□ -2.6
HLA-DPA1P20036 SNORD114-25-201ENST00000363742 72 ntBASIC-1.2□□□□□ -2.6
HLA-DPA1P20036 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.2□□□□□ -2.6
HLA-DPA1P20036 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.2□□□□□ -2.6
HLA-DPA1P20036 MIR5704-201ENST00000584029 77 ntBASIC-1.2□□□□□ -2.6
HLA-DPA1P20036 MTND3P2-201ENST00000438452 342 ntBASIC-1.21□□□□□ -2.6
HLA-DPA1P20036 SNORD22.1-201ENST00000516331 125 ntBASIC-1.21□□□□□ -2.6
HLA-DPA1P20036 RNU6-762P-201ENST00000517107 102 ntBASIC-1.21□□□□□ -2.6
HLA-DPA1P20036 RNU6-682P-201ENST00000363843 106 ntBASIC-1.22□□□□□ -2.6
HLA-DPA1P20036 SNORD114-4-201ENST00000363962 75 ntBASIC-1.22□□□□□ -2.6
HLA-DPA1P20036 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.22□□□□□ -2.6
HLA-DPA1P20036 MIR451A-201ENST00000385059 72 ntBASIC-1.22□□□□□ -2.6
HLA-DPA1P20036 MIR518B-201ENST00000385127 83 ntBASIC-1.22□□□□□ -2.6
HLA-DPA1P20036 SNORD83B-201ENST00000386745 93 ntBASIC-1.22□□□□□ -2.6
HLA-DPA1P20036 AL158147.1-201ENST00000443970 75 ntBASIC-1.22□□□□□ -2.6
HLA-DPA1P20036 AC097510.1-201ENST00000510945 133 ntBASIC-1.22□□□□□ -2.6
HLA-DPA1P20036 SNORA81.3-201ENST00000517283 198 ntBASIC-1.22□□□□□ -2.6
HLA-DPA1P20036 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.23□□□□□ -2.61
HLA-DPA1P20036 RNU6-973P-201ENST00000364690 107 ntBASIC-1.23□□□□□ -2.61
HLA-DPA1P20036 RNU6-54P-201ENST00000365563 107 ntBASIC-1.23□□□□□ -2.61
HLA-DPA1P20036 RNU6-816P-201ENST00000390914 107 ntBASIC-1.23□□□□□ -2.61
HLA-DPA1P20036 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.23□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms