Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 U6.81-201ENST00000612550 106 ntBASIC1.17□□□□□ -2.22
KRT4P19013 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
KRT4P19013 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
KRT4P19013 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
KRT4P19013 RNU6-482P-201ENST00000391068 107 ntBASIC1.16□□□□□ -2.22
KRT4P19013 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.16□□□□□ -2.22
KRT4P19013 AC067940.1-201ENST00000458411 300 ntBASIC1.16□□□□□ -2.22
KRT4P19013 AC125388.1-201ENST00000459631 156 ntBASIC1.16□□□□□ -2.22
KRT4P19013 RNU6-287P-201ENST00000516230 98 ntBASIC1.16□□□□□ -2.22
KRT4P19013 RNA5SP404-201ENST00000517118 132 ntBASIC1.16□□□□□ -2.22
KRT4P19013 MIR3675-201ENST00000583661 73 ntBASIC1.16□□□□□ -2.22
KRT4P19013 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.16□□□□□ -2.22
KRT4P19013 RNU6-330P-201ENST00000363015 107 ntBASIC1.15□□□□□ -2.23
KRT4P19013 RNU6-1052P-201ENST00000411398 104 ntBASIC1.15□□□□□ -2.23
KRT4P19013 RNU6-719P-201ENST00000516671 104 ntBASIC1.15□□□□□ -2.23
KRT4P19013 uc_338.16-201ENST00000621804 95 ntBASIC1.15□□□□□ -2.23
KRT4P19013 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.15□□□□□ -2.23
KRT4P19013 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
KRT4P19013 RNU6-824P-201ENST00000363724 104 ntBASIC1.14□□□□□ -2.23
KRT4P19013 RNU6-540P-201ENST00000384622 101 ntBASIC1.14□□□□□ -2.23
KRT4P19013 MIR520F-201ENST00000384824 87 ntBASIC1.14□□□□□ -2.23
KRT4P19013 MIR216B-201ENST00000390186 82 ntBASIC1.14□□□□□ -2.23
KRT4P19013 RNU6-1177P-201ENST00000391058 104 ntBASIC1.14□□□□□ -2.23
KRT4P19013 SNORD30.1-201ENST00000391309 70 ntBASIC1.14□□□□□ -2.23
KRT4P19013 MIR1827-201ENST00000408549 66 ntBASIC1.14□□□□□ -2.23
KRT4P19013 AC108210.2-201ENST00000503681 201 ntBASIC1.14□□□□□ -2.23
KRT4P19013 RNU7-13P-201ENST00000516413 62 ntBASIC1.14□□□□□ -2.23
KRT4P19013 AC015712.3-201ENST00000559380 164 ntBASIC1.14□□□□□ -2.23
KRT4P19013 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
KRT4P19013 Y_RNA.32-201ENST00000362589 110 ntBASIC1.13□□□□□ -2.23
KRT4P19013 RNA5SP403-201ENST00000363598 108 ntBASIC1.13□□□□□ -2.23
KRT4P19013 AL591806.2-201ENST00000433122 173 ntBASIC1.13□□□□□ -2.23
KRT4P19013 RNU6-752P-201ENST00000516376 102 ntBASIC1.13□□□□□ -2.23
KRT4P19013 SNORA31.14-201ENST00000516728 116 ntBASIC1.13□□□□□ -2.23
KRT4P19013 RNU6-548P-201ENST00000517083 115 ntBASIC1.13□□□□□ -2.23
KRT4P19013 MIR4421-201ENST00000578133 69 ntBASIC1.13□□□□□ -2.23
KRT4P19013 SNORD115-24-201ENST00000363528 82 ntBASIC1.12□□□□□ -2.23
KRT4P19013 Y_RNA.340-201ENST00000365330 92 ntBASIC1.12□□□□□ -2.23
KRT4P19013 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.12□□□□□ -2.23
KRT4P19013 MIR3124-201ENST00000582636 67 ntBASIC1.12□□□□□ -2.23
KRT4P19013 MIR8053-201ENST00000613344 75 ntBASIC1.12□□□□□ -2.23
KRT4P19013 AL157834.3-201ENST00000615543 103 ntBASIC1.12□□□□□ -2.23
KRT4P19013 U6.111-201ENST00000636093 83 ntBASIC1.12□□□□□ -2.23
KRT4P19013 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
KRT4P19013 SNORD115-31-201ENST00000365318 82 ntBASIC1.11□□□□□ -2.23
KRT4P19013 RNU6-663P-201ENST00000391105 106 ntBASIC1.11□□□□□ -2.23
KRT4P19013 RNU6-274P-201ENST00000459566 107 ntBASIC1.11□□□□□ -2.23
KRT4P19013 MIR4781-201ENST00000585250 76 ntBASIC1.11□□□□□ -2.23
KRT4P19013 RMST_2.1-201ENST00000617263 136 ntBASIC1.11□□□□□ -2.23
KRT4P19013 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRT4P19013 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRT4P19013 RNU6-1126P-201ENST00000384002 107 ntBASIC1.1□□□□□ -2.23
KRT4P19013 RNU6-800P-201ENST00000384473 103 ntBASIC1.1□□□□□ -2.23
KRT4P19013 MIR2113-201ENST00000459007 91 ntBASIC1.1□□□□□ -2.23
KRT4P19013 RNU6-135P-201ENST00000516769 101 ntBASIC1.1□□□□□ -2.23
KRT4P19013 MIR3920-201ENST00000581751 86 ntBASIC1.1□□□□□ -2.23
KRT4P19013 MIR4769-201ENST00000584126 77 ntBASIC1.1□□□□□ -2.23
KRT4P19013 AL136317.1-201ENST00000612653 226 ntBASIC1.1□□□□□ -2.23
KRT4P19013 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.1□□□□□ -2.23
KRT4P19013 Y_RNA.386-201ENST00000383913 105 ntBASIC1.09□□□□□ -2.23
KRT4P19013 MIR617-201ENST00000385030 97 ntBASIC1.09□□□□□ -2.23
KRT4P19013 RNU7-161P-201ENST00000517289 62 ntBASIC1.09□□□□□ -2.23
KRT4P19013 MIR4773-1-201ENST00000637203 78 ntBASIC1.09□□□□□ -2.23
KRT4P19013 RNA5SP432-201ENST00000362480 116 ntBASIC1.08□□□□□ -2.24
KRT4P19013 SNORD45.1-201ENST00000363181 77 ntBASIC1.08□□□□□ -2.24
KRT4P19013 RNU6-382P-201ENST00000365181 106 ntBASIC1.08□□□□□ -2.24
KRT4P19013 RNU6-895P-201ENST00000384125 103 ntBASIC1.08□□□□□ -2.24
KRT4P19013 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.08□□□□□ -2.24
KRT4P19013 MIR1265-201ENST00000408444 86 ntBASIC1.08□□□□□ -2.24
KRT4P19013 AC002429.1-201ENST00000437672 148 ntBASIC1.08□□□□□ -2.24
KRT4P19013 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.08□□□□□ -2.24
KRT4P19013 AL078603.1-201ENST00000603824 313 ntBASIC1.08□□□□□ -2.24
KRT4P19013 AL353997.5-201ENST00000618886 171 ntBASIC1.08□□□□□ -2.24
KRT4P19013 RNU1-17P-201ENST00000363022 152 ntBASIC1.07□□□□□ -2.24
KRT4P19013 RNA5SP117-201ENST00000365294 118 ntBASIC1.07□□□□□ -2.24
KRT4P19013 MIR764-201ENST00000390811 85 ntBASIC1.07□□□□□ -2.24
KRT4P19013 RNU7-24P-201ENST00000458867 62 ntBASIC1.07□□□□□ -2.24
KRT4P19013 AC002350.1-201ENST00000490759 375 ntBASIC1.07□□□□□ -2.24
KRT4P19013 RNU6-1110P-201ENST00000516462 101 ntBASIC1.07□□□□□ -2.24
KRT4P19013 MIR548AG2-201ENST00000581228 64 ntBASIC1.07□□□□□ -2.24
KRT4P19013 AC067863.3-201ENST00000624172 122 ntBASIC1.07□□□□□ -2.24
KRT4P19013 Y_RNA.258-201ENST00000364613 105 ntBASIC1.06□□□□□ -2.24
KRT4P19013 RNU6-471P-201ENST00000383944 106 ntBASIC1.06□□□□□ -2.24
KRT4P19013 SNORD75.2-201ENST00000408784 58 ntBASIC1.06□□□□□ -2.24
KRT4P19013 AC244098.3-201ENST00000424803 96 ntBASIC1.06□□□□□ -2.24
KRT4P19013 FABP5P4-201ENST00000437203 171 ntBASIC1.06□□□□□ -2.24
KRT4P19013 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.06□□□□□ -2.24
KRT4P19013 RNU7-74P-201ENST00000459104 62 ntBASIC1.06□□□□□ -2.24
KRT4P19013 RNU7-104P-201ENST00000459398 79 ntBASIC1.06□□□□□ -2.24
KRT4P19013 MIR4639-201ENST00000584938 69 ntBASIC1.06□□□□□ -2.24
KRT4P19013 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
KRT4P19013 SNORA7.1-201ENST00000363750 139 ntBASIC1.05□□□□□ -2.24
KRT4P19013 RNU1-124P-201ENST00000363861 145 ntBASIC1.05□□□□□ -2.24
KRT4P19013 RNA5SP99-201ENST00000364020 114 ntBASIC1.05□□□□□ -2.24
KRT4P19013 Y_RNA.205-201ENST00000364128 113 ntBASIC1.05□□□□□ -2.24
KRT4P19013 SNORD115-22-201ENST00000364456 82 ntBASIC1.05□□□□□ -2.24
KRT4P19013 SNORD45A-201ENST00000384512 84 ntBASIC1.05□□□□□ -2.24
KRT4P19013 AL691482.2-201ENST00000457453 84 ntBASIC1.05□□□□□ -2.24
KRT4P19013 U7.7-201ENST00000459276 60 ntBASIC1.05□□□□□ -2.24
KRT4P19013 RNU6-469P-201ENST00000516253 101 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms