Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC2.63□□□□□ -1.99
CD44P16070 MIR7106-201ENST00000612419 65 ntBASIC2.63□□□□□ -1.99
CD44P16070 MIR6817-201ENST00000615588 66 ntBASIC2.63□□□□□ -1.99
CD44P16070 AC243829.3-201ENST00000622177 108 ntBASIC2.63□□□□□ -1.99
CD44P16070 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC2.63□□□□□ -1.99
CD44P16070 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CD44P16070 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CD44P16070 AC080100.1-201ENST00000624239 5356 ntBASIC2.62□□□□□ -1.99
CD44P16070 MIR429-201ENST00000362106 83 ntBASIC2.62□□□□□ -1.99
CD44P16070 SNORD56.5-201ENST00000364281 72 ntBASIC2.62□□□□□ -1.99
CD44P16070 Y_RNA.363-201ENST00000365529 113 ntBASIC2.62□□□□□ -1.99
CD44P16070 MIR516B1-201ENST00000385211 90 ntBASIC2.62□□□□□ -1.99
CD44P16070 RNA5SP184-201ENST00000411071 108 ntBASIC2.62□□□□□ -1.99
CD44P16070 AC046143.2-201ENST00000609789 160 ntBASIC2.62□□□□□ -1.99
CD44P16070 MIR1291-201ENST00000627649 87 ntBASIC2.62□□□□□ -1.99
CD44P16070 RNA5SP276-201ENST00000362580 94 ntBASIC2.61□□□□□ -1.99
CD44P16070 MIR196B-201ENST00000384852 84 ntBASIC2.61□□□□□ -1.99
CD44P16070 AL451105.1-201ENST00000450005 189 ntBASIC2.61□□□□□ -1.99
CD44P16070 RNU6-716P-201ENST00000365621 103 ntBASIC2.6□□□□□ -1.99
CD44P16070 AC002350.1-201ENST00000490759 375 ntBASIC2.6□□□□□ -1.99
CD44P16070 RNA5SP94-201ENST00000516917 108 ntBASIC2.6□□□□□ -1.99
CD44P16070 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CD44P16070 MIR329-2-201ENST00000385029 84 ntBASIC2.59□□□□□ -1.99
CD44P16070 SNORA11.1-201ENST00000408133 129 ntBASIC2.59□□□□□ -1.99
CD44P16070 AL591704.2-201ENST00000421658 181 ntBASIC2.59□□□□□ -1.99
CD44P16070 RNU7-21P-201ENST00000459430 62 ntBASIC2.59□□□□□ -1.99
CD44P16070 RNU7-151P-201ENST00000516930 53 ntBASIC2.59□□□□□ -1.99
CD44P16070 AC012493.3-201ENST00000604494 112 ntBASIC2.59□□□□□ -1.99
CD44P16070 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
CD44P16070 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CD44P16070 SNORD1A-201ENST00000364968 72 ntBASIC2.58□□□□□ -2
CD44P16070 RNU6-458P-201ENST00000384179 107 ntBASIC2.58□□□□□ -2
CD44P16070 RNU6-1065P-201ENST00000384513 106 ntBASIC2.58□□□□□ -2
CD44P16070 RNU6-59P-201ENST00000384787 107 ntBASIC2.58□□□□□ -2
CD44P16070 MIR548AE1-201ENST00000583292 70 ntBASIC2.58□□□□□ -2
CD44P16070 U6.58-201ENST00000613107 107 ntBASIC2.58□□□□□ -2
CD44P16070 RMST_2.1-201ENST00000617263 136 ntBASIC2.58□□□□□ -2
CD44P16070 RNU6-1008P-201ENST00000384160 104 ntBASIC2.57□□□□□ -2
CD44P16070 Y_RNA.500-201ENST00000384466 111 ntBASIC2.57□□□□□ -2
CD44P16070 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.57□□□□□ -2
CD44P16070 AC079140.2-201ENST00000506193 142 ntBASIC2.57□□□□□ -2
CD44P16070 RNU6-469P-201ENST00000516253 101 ntBASIC2.57□□□□□ -2
CD44P16070 SNORA44.1-201ENST00000517031 108 ntBASIC2.57□□□□□ -2
CD44P16070 HMGN2P23-201ENST00000456759 269 ntBASIC2.56□□□□□ -2
CD44P16070 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.56□□□□□ -2
CD44P16070 RNU6-56P-201ENST00000516986 93 ntBASIC2.56□□□□□ -2
CD44P16070 RNA5SP47-201ENST00000517230 109 ntBASIC2.56□□□□□ -2
CD44P16070 AC243829.6-201ENST00000612652 106 ntBASIC2.56□□□□□ -2
CD44P16070 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CD44P16070 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.55□□□□□ -2
CD44P16070 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.55□□□□□ -2
CD44P16070 AL512310.8-201ENST00000550183 120 ntBASIC2.55□□□□□ -2
CD44P16070 MIR4287-201ENST00000579398 78 ntBASIC2.55□□□□□ -2
CD44P16070 MIR3937-201ENST00000580135 106 ntBASIC2.55□□□□□ -2
CD44P16070 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.54□□□□□ -2
CD44P16070 VTRNA1-1-201ENST00000363120 99 ntBASIC2.54□□□□□ -2
CD44P16070 MIR934-201ENST00000401241 83 ntBASIC2.54□□□□□ -2
CD44P16070 MIR1827-201ENST00000408549 66 ntBASIC2.54□□□□□ -2
CD44P16070 RNU7-154P-201ENST00000516194 62 ntBASIC2.54□□□□□ -2
CD44P16070 MIR5007-201ENST00000583098 95 ntBASIC2.54□□□□□ -2
CD44P16070 MIR6766-201ENST00000622641 72 ntBASIC2.54□□□□□ -2
CD44P16070 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
CD44P16070 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CD44P16070 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
CD44P16070 SNORD33-201ENST00000362761 85 ntBASIC2.53□□□□□ -2
CD44P16070 SNORA5B-201ENST00000363786 132 ntBASIC2.53□□□□□ -2
CD44P16070 RNU6-828P-201ENST00000364876 107 ntBASIC2.53□□□□□ -2
CD44P16070 7SK.11-201ENST00000615477 250 ntBASIC2.53□□□□□ -2
CD44P16070 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
CD44P16070 RNA5SP289-201ENST00000362332 137 ntBASIC2.52□□□□□ -2.01
CD44P16070 RNU6-525P-201ENST00000363685 104 ntBASIC2.52□□□□□ -2.01
CD44P16070 SNORD18A-201ENST00000363753 72 ntBASIC2.52□□□□□ -2.01
CD44P16070 SNORD114-30-201ENST00000364448 72 ntBASIC2.52□□□□□ -2.01
CD44P16070 MIR483-201ENST00000385070 76 ntBASIC2.52□□□□□ -2.01
CD44P16070 snoU13.9-201ENST00000458927 103 ntBASIC2.52□□□□□ -2.01
CD44P16070 AC104435.1-201ENST00000483483 166 ntBASIC2.52□□□□□ -2.01
CD44P16070 RNU1-52P-201ENST00000384190 164 ntBASIC2.51□□□□□ -2.01
CD44P16070 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CD44P16070 RNU7-90P-201ENST00000459216 62 ntBASIC2.51□□□□□ -2.01
CD44P16070 U2.18-201ENST00000622185 84 ntBASIC2.51□□□□□ -2.01
CD44P16070 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
CD44P16070 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
CD44P16070 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CD44P16070 RNU6-598P-201ENST00000364017 105 ntBASIC2.5□□□□□ -2.01
CD44P16070 RNU6-945P-201ENST00000383947 107 ntBASIC2.5□□□□□ -2.01
CD44P16070 MIR4713-201ENST00000582691 75 ntBASIC2.5□□□□□ -2.01
CD44P16070 MIR4473-201ENST00000583731 91 ntBASIC2.5□□□□□ -2.01
CD44P16070 AL162376.1-201ENST00000624117 175 ntBASIC2.5□□□□□ -2.01
CD44P16070 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CD44P16070 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CD44P16070 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CD44P16070 SNORA80D-201ENST00000384488 135 ntBASIC2.49□□□□□ -2.01
CD44P16070 MIR548H4-201ENST00000408689 111 ntBASIC2.49□□□□□ -2.01
CD44P16070 MIR5194-201ENST00000582634 120 ntBASIC2.49□□□□□ -2.01
CD44P16070 SNORD115-25-201ENST00000362619 82 ntBASIC2.48□□□□□ -2.01
CD44P16070 MIR125B1-201ENST00000385236 88 ntBASIC2.48□□□□□ -2.01
CD44P16070 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.48□□□□□ -2.01
CD44P16070 MIR5002-201ENST00000584713 97 ntBASIC2.48□□□□□ -2.01
CD44P16070 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CD44P16070 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 191 ms