Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.77□□□□□ -2.13
BMP4P12644 RNA5SP182-201ENST00000516064 82 ntBASIC1.77□□□□□ -2.13
BMP4P12644 AC092634.7-201ENST00000621022 103 ntBASIC1.77□□□□□ -2.13
BMP4P12644 RNU6-829P-201ENST00000363700 112 ntBASIC1.76□□□□□ -2.13
BMP4P12644 Y_RNA.174-201ENST00000363781 105 ntBASIC1.76□□□□□ -2.13
BMP4P12644 SNORA80D-201ENST00000384488 135 ntBASIC1.76□□□□□ -2.13
BMP4P12644 MIR583-201ENST00000384846 75 ntBASIC1.76□□□□□ -2.13
BMP4P12644 MIR100-201ENST00000385259 80 ntBASIC1.76□□□□□ -2.13
BMP4P12644 RNU7-104P-201ENST00000459398 79 ntBASIC1.76□□□□□ -2.13
BMP4P12644 MIR3657-201ENST00000584818 117 ntBASIC1.76□□□□□ -2.13
BMP4P12644 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
BMP4P12644 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.76□□□□□ -2.13
BMP4P12644 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.75□□□□□ -2.13
BMP4P12644 RNU6-910P-201ENST00000390844 107 ntBASIC1.75□□□□□ -2.13
BMP4P12644 RNU6-482P-201ENST00000391068 107 ntBASIC1.75□□□□□ -2.13
BMP4P12644 AL591806.2-201ENST00000433122 173 ntBASIC1.75□□□□□ -2.13
BMP4P12644 SNORD42B-201ENST00000458893 67 ntBASIC1.75□□□□□ -2.13
BMP4P12644 RNU1-123P-201ENST00000458950 160 ntBASIC1.75□□□□□ -2.13
BMP4P12644 RNU6-542P-201ENST00000516405 103 ntBASIC1.75□□□□□ -2.13
BMP4P12644 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
BMP4P12644 MIR520F-201ENST00000384824 87 ntBASIC1.74□□□□□ -2.13
BMP4P12644 RNU1-78P-201ENST00000391248 165 ntBASIC1.74□□□□□ -2.13
BMP4P12644 MIR1289-2-201ENST00000408360 111 ntBASIC1.74□□□□□ -2.13
BMP4P12644 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.74□□□□□ -2.13
BMP4P12644 AC067940.1-201ENST00000458411 300 ntBASIC1.74□□□□□ -2.13
BMP4P12644 RNU7-90P-201ENST00000459216 62 ntBASIC1.74□□□□□ -2.13
BMP4P12644 SNORD79.1-201ENST00000516069 84 ntBASIC1.74□□□□□ -2.13
BMP4P12644 AC015712.3-201ENST00000559380 164 ntBASIC1.74□□□□□ -2.13
BMP4P12644 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
BMP4P12644 RNU6-645P-201ENST00000364649 106 ntBASIC1.73□□□□□ -2.13
BMP4P12644 SNORA26.9-201ENST00000391322 122 ntBASIC1.73□□□□□ -2.13
BMP4P12644 RNU6-295P-201ENST00000516901 104 ntBASIC1.73□□□□□ -2.13
BMP4P12644 SNORA40.17-201ENST00000517256 115 ntBASIC1.73□□□□□ -2.13
BMP4P12644 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.73□□□□□ -2.13
BMP4P12644 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
BMP4P12644 MIR1-1-201ENST00000362147 71 ntBASIC1.72□□□□□ -2.13
BMP4P12644 Y_RNA.236-201ENST00000364427 111 ntBASIC1.72□□□□□ -2.13
BMP4P12644 MIR3198-2-201ENST00000577868 80 ntBASIC1.72□□□□□ -2.13
BMP4P12644 RNA5SP432-201ENST00000362480 116 ntBASIC1.71□□□□□ -2.14
BMP4P12644 RNU6-1079P-201ENST00000362861 110 ntBASIC1.71□□□□□ -2.14
BMP4P12644 SNORA25.5-201ENST00000363782 126 ntBASIC1.71□□□□□ -2.14
BMP4P12644 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
BMP4P12644 MIR1827-201ENST00000408549 66 ntBASIC1.71□□□□□ -2.14
BMP4P12644 MIR4769-201ENST00000584126 77 ntBASIC1.71□□□□□ -2.14
BMP4P12644 AL136317.1-201ENST00000612653 226 ntBASIC1.71□□□□□ -2.14
BMP4P12644 Y_RNA.783-201ENST00000613546 102 ntBASIC1.71□□□□□ -2.14
BMP4P12644 RMST_2.1-201ENST00000617263 136 ntBASIC1.71□□□□□ -2.14
BMP4P12644 AL353997.5-201ENST00000618886 171 ntBASIC1.71□□□□□ -2.14
BMP4P12644 RNA5SP192-201ENST00000364404 120 ntBASIC1.7□□□□□ -2.14
BMP4P12644 SNORD48-201ENST00000364953 64 ntBASIC1.7□□□□□ -2.14
BMP4P12644 RNU6-260P-201ENST00000384092 107 ntBASIC1.7□□□□□ -2.14
BMP4P12644 RNU6V-201ENST00000384105 107 ntBASIC1.7□□□□□ -2.14
BMP4P12644 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.7□□□□□ -2.14
BMP4P12644 AC067863.3-201ENST00000624172 122 ntBASIC1.7□□□□□ -2.14
BMP4P12644 RNA5SP363-201ENST00000365072 115 ntBASIC1.69□□□□□ -2.14
BMP4P12644 RNA5SP233-201ENST00000459153 113 ntBASIC1.69□□□□□ -2.14
BMP4P12644 SCARNA21.1-201ENST00000515996 128 ntBASIC1.69□□□□□ -2.14
BMP4P12644 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.69□□□□□ -2.14
BMP4P12644 MIR4422-201ENST00000581938 83 ntBASIC1.69□□□□□ -2.14
BMP4P12644 MIR4781-201ENST00000585250 76 ntBASIC1.69□□□□□ -2.14
BMP4P12644 MIR7-2-201ENST00000384970 110 ntBASIC1.68□□□□□ -2.14
BMP4P12644 MIR644A-201ENST00000385262 94 ntBASIC1.68□□□□□ -2.14
BMP4P12644 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
BMP4P12644 RNU6-902P-201ENST00000517212 91 ntBASIC1.68□□□□□ -2.14
BMP4P12644 MIR466-201ENST00000580653 84 ntBASIC1.68□□□□□ -2.14
BMP4P12644 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
BMP4P12644 RNU6-990P-201ENST00000364385 104 ntBASIC1.67□□□□□ -2.14
BMP4P12644 RNU6-656P-201ENST00000516785 107 ntBASIC1.67□□□□□ -2.14
BMP4P12644 AL096840.1-201ENST00000603287 93 ntBASIC1.67□□□□□ -2.14
BMP4P12644 SNORA2.1-201ENST00000363089 137 ntBASIC1.66□□□□□ -2.14
BMP4P12644 SNORA16.1-201ENST00000364597 132 ntBASIC1.66□□□□□ -2.14
BMP4P12644 RNA5SP299-201ENST00000391203 116 ntBASIC1.66□□□□□ -2.14
BMP4P12644 AC002350.1-201ENST00000490759 375 ntBASIC1.66□□□□□ -2.14
BMP4P12644 AC008834.1-201ENST00000511612 175 ntBASIC1.66□□□□□ -2.14
BMP4P12644 RNU6-446P-201ENST00000362827 106 ntBASIC1.65□□□□□ -2.15
BMP4P12644 MIR676-201ENST00000390702 67 ntBASIC1.65□□□□□ -2.15
BMP4P12644 SNORD41.1-201ENST00000391000 69 ntBASIC1.65□□□□□ -2.15
BMP4P12644 RNA5SP147-201ENST00000516493 109 ntBASIC1.65□□□□□ -2.15
BMP4P12644 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.65□□□□□ -2.15
BMP4P12644 RNU6-940P-201ENST00000363433 104 ntBASIC1.64□□□□□ -2.15
BMP4P12644 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.64□□□□□ -2.15
BMP4P12644 MIR4419B-201ENST00000577260 68 ntBASIC1.64□□□□□ -2.15
BMP4P12644 SNORA7.1-201ENST00000363750 139 ntBASIC1.63□□□□□ -2.15
BMP4P12644 MT-TY-201ENST00000387409 66 ntBASIC1.63□□□□□ -2.15
BMP4P12644 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.63□□□□□ -2.15
BMP4P12644 SNORA70.22-201ENST00000517160 124 ntBASIC1.63□□□□□ -2.15
BMP4P12644 AC244669.1-204ENST00000621564 178 ntBASIC1.63□□□□□ -2.15
BMP4P12644 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
BMP4P12644 SNORD28-201ENST00000384706 75 ntBASIC1.62□□□□□ -2.15
BMP4P12644 RNA5SP458-201ENST00000516188 119 ntBASIC1.62□□□□□ -2.15
BMP4P12644 MIR4639-201ENST00000584938 69 ntBASIC1.62□□□□□ -2.15
BMP4P12644 MIR6739-201ENST00000622461 75 ntBASIC1.62□□□□□ -2.15
BMP4P12644 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
BMP4P12644 RNA5SP215-201ENST00000363440 122 ntBASIC1.61□□□□□ -2.15
BMP4P12644 RNA5SP117-201ENST00000365294 118 ntBASIC1.61□□□□□ -2.15
BMP4P12644 RNU7-74P-201ENST00000459104 62 ntBASIC1.61□□□□□ -2.15
BMP4P12644 RNU6-1089P-201ENST00000516473 104 ntBASIC1.61□□□□□ -2.15
BMP4P12644 SNORA25.15-201ENST00000516487 89 ntBASIC1.61□□□□□ -2.15
BMP4P12644 MIR6845-201ENST00000613182 61 ntBASIC1.61□□□□□ -2.15
BMP4P12644 SNORD12-201ENST00000391002 90 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 235.2 ms