Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 AC097635.1-201ENST00000450678 155 ntBASIC1.6□□□□□ -2.15
SRFP11831 RNU6-765P-201ENST00000516916 99 ntBASIC1.6□□□□□ -2.15
SRFP11831 AC022709.1-201ENST00000615967 87 ntBASIC1.6□□□□□ -2.15
SRFP11831 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
SRFP11831 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.15
SRFP11831 RNU6-681P-201ENST00000364012 104 ntBASIC1.59□□□□□ -2.15
SRFP11831 RNA5SP245-201ENST00000364239 121 ntBASIC1.59□□□□□ -2.15
SRFP11831 RNU6-364P-201ENST00000384387 107 ntBASIC1.59□□□□□ -2.15
SRFP11831 RNU6-535P-201ENST00000384722 107 ntBASIC1.59□□□□□ -2.15
SRFP11831 MIR519A1-201ENST00000385257 85 ntBASIC1.59□□□□□ -2.15
SRFP11831 RNU6-910P-201ENST00000390844 107 ntBASIC1.59□□□□□ -2.15
SRFP11831 RPS26P5-201ENST00000418544 335 ntBASIC1.59□□□□□ -2.15
SRFP11831 MIR3675-201ENST00000583661 73 ntBASIC1.59□□□□□ -2.15
SRFP11831 MIR6515-201ENST00000619843 57 ntBASIC1.59□□□□□ -2.15
SRFP11831 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.58□□□□□ -2.16
SRFP11831 SNORD45.1-201ENST00000363181 77 ntBASIC1.58□□□□□ -2.16
SRFP11831 Y_RNA.363-201ENST00000365529 113 ntBASIC1.58□□□□□ -2.16
SRFP11831 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SRFP11831 MIR1323-201ENST00000408090 73 ntBASIC1.58□□□□□ -2.16
SRFP11831 RNU6-935P-201ENST00000410371 100 ntBASIC1.58□□□□□ -2.16
SRFP11831 RNU7-90P-201ENST00000459216 62 ntBASIC1.58□□□□□ -2.16
SRFP11831 RNU7-21P-201ENST00000459430 62 ntBASIC1.58□□□□□ -2.16
SRFP11831 AC138907.6-201ENST00000568401 126 ntBASIC1.58□□□□□ -2.16
SRFP11831 AC138869.1-201ENST00000568623 124 ntBASIC1.58□□□□□ -2.16
SRFP11831 MIR4773-1-201ENST00000637203 78 ntBASIC1.58□□□□□ -2.16
SRFP11831 RNU6-824P-201ENST00000363724 104 ntBASIC1.57□□□□□ -2.16
SRFP11831 MIR2113-201ENST00000459007 91 ntBASIC1.57□□□□□ -2.16
SRFP11831 RNU7-40P-201ENST00000516397 64 ntBASIC1.57□□□□□ -2.16
SRFP11831 RNU6-1057P-201ENST00000517162 102 ntBASIC1.57□□□□□ -2.16
SRFP11831 MIR4676-201ENST00000583078 72 ntBASIC1.57□□□□□ -2.16
SRFP11831 AL353770.2-201ENST00000620024 78 ntBASIC1.57□□□□□ -2.16
SRFP11831 RNU6-630P-201ENST00000391258 106 ntBASIC1.56□□□□□ -2.16
SRFP11831 MIR938-201ENST00000401216 83 ntBASIC1.56□□□□□ -2.16
SRFP11831 MIR9-2-201ENST00000384838 87 ntBASIC1.55□□□□□ -2.16
SRFP11831 AC097510.1-201ENST00000510945 133 ntBASIC1.55□□□□□ -2.16
SRFP11831 AC005520.4-201ENST00000604337 90 ntBASIC1.55□□□□□ -2.16
SRFP11831 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.55□□□□□ -2.16
SRFP11831 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SRFP11831 MIR96-201ENST00000362288 78 ntBASIC1.54□□□□□ -2.16
SRFP11831 MIR100-201ENST00000385259 80 ntBASIC1.54□□□□□ -2.16
SRFP11831 AC093423.1-201ENST00000440817 142 ntBASIC1.54□□□□□ -2.16
SRFP11831 RNU6-977P-201ENST00000516411 103 ntBASIC1.54□□□□□ -2.16
SRFP11831 RNU6-881P-201ENST00000516813 102 ntBASIC1.54□□□□□ -2.16
SRFP11831 SNORA70.22-201ENST00000517160 124 ntBASIC1.54□□□□□ -2.16
SRFP11831 MIR3122-201ENST00000577243 73 ntBASIC1.54□□□□□ -2.16
SRFP11831 AC027335.2-201ENST00000624030 375 ntBASIC1.54□□□□□ -2.16
SRFP11831 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SRFP11831 SNORD48-201ENST00000364953 64 ntBASIC1.53□□□□□ -2.16
SRFP11831 RNU6-604P-201ENST00000390917 100 ntBASIC1.53□□□□□ -2.16
SRFP11831 SNORD79.1-201ENST00000516069 84 ntBASIC1.53□□□□□ -2.16
SRFP11831 RNA5SP61-201ENST00000516453 100 ntBASIC1.53□□□□□ -2.16
SRFP11831 U6.81-201ENST00000612550 106 ntBASIC1.53□□□□□ -2.16
SRFP11831 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
SRFP11831 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SRFP11831 MIR1-1-201ENST00000362147 71 ntBASIC1.52□□□□□ -2.17
SRFP11831 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.52□□□□□ -2.17
SRFP11831 Y_RNA.606-201ENST00000410579 103 ntBASIC1.52□□□□□ -2.17
SRFP11831 AL354695.1-201ENST00000427935 228 ntBASIC1.52□□□□□ -2.17
SRFP11831 AC067940.1-201ENST00000458411 300 ntBASIC1.52□□□□□ -2.17
SRFP11831 RNU7-102P-201ENST00000458948 62 ntBASIC1.52□□□□□ -2.17
SRFP11831 MTRNR2L2-201ENST00000604882 87 ntBASIC1.52□□□□□ -2.17
SRFP11831 MIR6078-201ENST00000611069 100 ntBASIC1.52□□□□□ -2.17
SRFP11831 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SRFP11831 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.52□□□□□ -2.17
SRFP11831 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.52□□□□□ -2.17
SRFP11831 SNORA24B-201ENST00000384176 131 ntBASIC1.51□□□□□ -2.17
SRFP11831 MIR222-201ENST00000384992 110 ntBASIC1.51□□□□□ -2.17
SRFP11831 RNU6-1177P-201ENST00000391058 104 ntBASIC1.51□□□□□ -2.17
SRFP11831 RNU1-119P-201ENST00000391122 165 ntBASIC1.51□□□□□ -2.17
SRFP11831 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.51□□□□□ -2.17
SRFP11831 RNU6-274P-201ENST00000459566 107 ntBASIC1.51□□□□□ -2.17
SRFP11831 RNU6-287P-201ENST00000516230 98 ntBASIC1.51□□□□□ -2.17
SRFP11831 RNU6-1265P-201ENST00000516342 103 ntBASIC1.51□□□□□ -2.17
SRFP11831 MIR4285-201ENST00000581001 85 ntBASIC1.51□□□□□ -2.17
SRFP11831 AC008608.1-201ENST00000603910 127 ntBASIC1.51□□□□□ -2.17
SRFP11831 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.51□□□□□ -2.17
SRFP11831 Y_RNA.30-201ENST00000362572 97 ntBASIC1.5□□□□□ -2.17
SRFP11831 SNORD115-22-201ENST00000364456 82 ntBASIC1.5□□□□□ -2.17
SRFP11831 RNU6-382P-201ENST00000365181 106 ntBASIC1.5□□□□□ -2.17
SRFP11831 RNU6-471P-201ENST00000383944 106 ntBASIC1.5□□□□□ -2.17
SRFP11831 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.5□□□□□ -2.17
SRFP11831 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SRFP11831 Y_RNA.258-201ENST00000364613 105 ntBASIC1.49□□□□□ -2.17
SRFP11831 Y_RNA.443-201ENST00000384135 111 ntBASIC1.49□□□□□ -2.17
SRFP11831 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.49□□□□□ -2.17
SRFP11831 MTND4LP19-201ENST00000403051 166 ntBASIC1.49□□□□□ -2.17
SRFP11831 MIR4804-201ENST00000581683 73 ntBASIC1.49□□□□□ -2.17
SRFP11831 MIR8053-201ENST00000613344 75 ntBASIC1.49□□□□□ -2.17
SRFP11831 SNORD113.1-201ENST00000363280 73 ntBASIC1.48□□□□□ -2.17
SRFP11831 MIR1304-201ENST00000408243 91 ntBASIC1.48□□□□□ -2.17
SRFP11831 RNU7-13P-201ENST00000516413 62 ntBASIC1.48□□□□□ -2.17
SRFP11831 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.48□□□□□ -2.17
SRFP11831 SNORA25.4-201ENST00000363666 124 ntBASIC1.47□□□□□ -2.17
SRFP11831 MIR520F-201ENST00000384824 87 ntBASIC1.47□□□□□ -2.17
SRFP11831 SNORD12-201ENST00000391002 90 ntBASIC1.47□□□□□ -2.17
SRFP11831 AC244098.3-201ENST00000424803 96 ntBASIC1.47□□□□□ -2.17
SRFP11831 AL691482.2-201ENST00000457453 84 ntBASIC1.47□□□□□ -2.17
SRFP11831 RNU6-1216P-201ENST00000362590 107 ntBASIC1.46□□□□□ -2.18
SRFP11831 MIR598-201ENST00000384868 97 ntBASIC1.46□□□□□ -2.18
SRFP11831 RNU7-56P-201ENST00000458744 62 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 259 ms