Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 MIR4696-201ENST00000581431 70 ntBASIC-0.58□□□□□ -2.5
CPSF4O95639 AC093726.3-201ENST00000637588 150 ntBASIC-0.58□□□□□ -2.5
CPSF4O95639 RNU6-30P-201ENST00000384561 107 ntBASIC-0.59□□□□□ -2.5
CPSF4O95639 RNU6-466P-201ENST00000391224 103 ntBASIC-0.59□□□□□ -2.5
CPSF4O95639 AL445193.1-201ENST00000441183 141 ntBASIC-0.59□□□□□ -2.5
CPSF4O95639 snoU13.11-201ENST00000459219 104 ntBASIC-0.59□□□□□ -2.5
CPSF4O95639 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.59□□□□□ -2.5
CPSF4O95639 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.59□□□□□ -2.5
CPSF4O95639 MIR548O2-201ENST00000616090 70 ntBASIC-0.59□□□□□ -2.5
CPSF4O95639 RNU6-664P-201ENST00000362381 107 ntBASIC-0.6□□□□□ -2.51
CPSF4O95639 RNU6-647P-201ENST00000364243 107 ntBASIC-0.6□□□□□ -2.51
CPSF4O95639 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.6□□□□□ -2.51
CPSF4O95639 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.6□□□□□ -2.51
CPSF4O95639 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.6□□□□□ -2.51
CPSF4O95639 RNU6-901P-201ENST00000384593 106 ntBASIC-0.6□□□□□ -2.51
CPSF4O95639 SNORD56B-201ENST00000384713 71 ntBASIC-0.6□□□□□ -2.51
CPSF4O95639 SNORA49-201ENST00000386157 136 ntBASIC-0.6□□□□□ -2.51
CPSF4O95639 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.6□□□□□ -2.51
CPSF4O95639 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.6□□□□□ -2.51
CPSF4O95639 RNA5SP169-201ENST00000517268 117 ntBASIC-0.6□□□□□ -2.51
CPSF4O95639 SNORA81.3-201ENST00000517283 198 ntBASIC-0.6□□□□□ -2.51
CPSF4O95639 MIR4436A-201ENST00000585278 85 ntBASIC-0.6□□□□□ -2.51
CPSF4O95639 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.6□□□□□ -2.51
CPSF4O95639 RNU6-235P-201ENST00000362644 107 ntBASIC-0.61□□□□□ -2.51
CPSF4O95639 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.61□□□□□ -2.51
CPSF4O95639 RNU6-682P-201ENST00000363843 106 ntBASIC-0.61□□□□□ -2.51
CPSF4O95639 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.61□□□□□ -2.51
CPSF4O95639 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.61□□□□□ -2.51
CPSF4O95639 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.61□□□□□ -2.51
CPSF4O95639 RNU6-409P-201ENST00000384114 104 ntBASIC-0.61□□□□□ -2.51
CPSF4O95639 RNU6-574P-201ENST00000384265 107 ntBASIC-0.61□□□□□ -2.51
CPSF4O95639 RNU6-196P-201ENST00000384315 107 ntBASIC-0.61□□□□□ -2.51
CPSF4O95639 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.61□□□□□ -2.51
CPSF4O95639 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.61□□□□□ -2.51
CPSF4O95639 MIR216B-201ENST00000390186 82 ntBASIC-0.61□□□□□ -2.51
CPSF4O95639 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.61□□□□□ -2.51
CPSF4O95639 MTND3P2-201ENST00000438452 342 ntBASIC-0.61□□□□□ -2.51
CPSF4O95639 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.61□□□□□ -2.51
CPSF4O95639 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.61□□□□□ -2.51
CPSF4O95639 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.61□□□□□ -2.51
CPSF4O95639 AC145423.2-201ENST00000610631 239 ntBASIC-0.61□□□□□ -2.51
CPSF4O95639 SNORD115-25-201ENST00000362619 82 ntBASIC-0.62□□□□□ -2.51
CPSF4O95639 SNORD114-14-201ENST00000362723 75 ntBASIC-0.62□□□□□ -2.51
CPSF4O95639 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.62□□□□□ -2.51
CPSF4O95639 SNORA3B-201ENST00000391305 131 ntBASIC-0.62□□□□□ -2.51
CPSF4O95639 RNU6-935P-201ENST00000410371 100 ntBASIC-0.62□□□□□ -2.51
CPSF4O95639 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.62□□□□□ -2.51
CPSF4O95639 RNU7-120P-201ENST00000459334 63 ntBASIC-0.62□□□□□ -2.51
CPSF4O95639 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.62□□□□□ -2.51
CPSF4O95639 RNU6-781P-201ENST00000516377 101 ntBASIC-0.62□□□□□ -2.51
CPSF4O95639 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.62□□□□□ -2.51
CPSF4O95639 MIR548AX-201ENST00000580117 73 ntBASIC-0.62□□□□□ -2.51
CPSF4O95639 MIR4280-201ENST00000582178 76 ntBASIC-0.62□□□□□ -2.51
CPSF4O95639 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.63□□□□□ -2.51
CPSF4O95639 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.63□□□□□ -2.51
CPSF4O95639 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.63□□□□□ -2.51
CPSF4O95639 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.63□□□□□ -2.51
CPSF4O95639 RNY1P7-201ENST00000384743 110 ntBASIC-0.63□□□□□ -2.51
CPSF4O95639 MIR513C-201ENST00000401352 84 ntBASIC-0.63□□□□□ -2.51
CPSF4O95639 AL158147.1-201ENST00000443970 75 ntBASIC-0.63□□□□□ -2.51
CPSF4O95639 snoU13.13-201ENST00000458842 104 ntBASIC-0.63□□□□□ -2.51
CPSF4O95639 RNA5SP67-201ENST00000516422 131 ntBASIC-0.63□□□□□ -2.51
CPSF4O95639 RNU6-762P-201ENST00000517107 102 ntBASIC-0.63□□□□□ -2.51
CPSF4O95639 AL442128.1-201ENST00000615151 90 ntBASIC-0.63□□□□□ -2.51
CPSF4O95639 AP001340.1-201ENST00000624405 217 ntBASIC-0.63□□□□□ -2.51
CPSF4O95639 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.64□□□□□ -2.51
CPSF4O95639 MIR204-201ENST00000385200 110 ntBASIC-0.64□□□□□ -2.51
CPSF4O95639 MIR196A1-201ENST00000388006 70 ntBASIC-0.64□□□□□ -2.51
CPSF4O95639 RNU7-55P-201ENST00000459426 62 ntBASIC-0.64□□□□□ -2.51
CPSF4O95639 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.64□□□□□ -2.51
CPSF4O95639 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.65□□□□□ -2.51
CPSF4O95639 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.65□□□□□ -2.51
CPSF4O95639 RNU6-54P-201ENST00000365563 107 ntBASIC-0.65□□□□□ -2.51
CPSF4O95639 MIR582-201ENST00000365731 98 ntBASIC-0.65□□□□□ -2.51
CPSF4O95639 MIR451A-201ENST00000385059 72 ntBASIC-0.65□□□□□ -2.51
CPSF4O95639 RNU6-816P-201ENST00000390914 107 ntBASIC-0.65□□□□□ -2.51
CPSF4O95639 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.65□□□□□ -2.51
CPSF4O95639 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.65□□□□□ -2.51
CPSF4O95639 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.65□□□□□ -2.51
CPSF4O95639 RNY4P6-201ENST00000363667 96 ntBASIC-0.66□□□□□ -2.52
CPSF4O95639 RNU6-694P-201ENST00000364071 147 ntBASIC-0.66□□□□□ -2.52
CPSF4O95639 SNORD116-18-201ENST00000383961 92 ntBASIC-0.66□□□□□ -2.52
CPSF4O95639 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.66□□□□□ -2.52
CPSF4O95639 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.66□□□□□ -2.52
CPSF4O95639 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.66□□□□□ -2.52
CPSF4O95639 SNORD38.3-201ENST00000516599 73 ntBASIC-0.66□□□□□ -2.52
CPSF4O95639 SNORA40.17-201ENST00000517256 115 ntBASIC-0.66□□□□□ -2.52
CPSF4O95639 RNU6-200P-201ENST00000364743 107 ntBASIC-0.67□□□□□ -2.52
CPSF4O95639 MIR548E-201ENST00000408287 88 ntBASIC-0.67□□□□□ -2.52
CPSF4O95639 SNORD2-201ENST00000459163 69 ntBASIC-0.67□□□□□ -2.52
CPSF4O95639 AC097510.1-201ENST00000510945 133 ntBASIC-0.67□□□□□ -2.52
CPSF4O95639 RNU6-75P-201ENST00000515944 104 ntBASIC-0.67□□□□□ -2.52
CPSF4O95639 MIR548X2-201ENST00000579776 100 ntBASIC-0.67□□□□□ -2.52
CPSF4O95639 RNU6-86P-201ENST00000606534 107 ntBASIC-0.67□□□□□ -2.52
CPSF4O95639 MIR6851-201ENST00000617060 67 ntBASIC-0.67□□□□□ -2.52
CPSF4O95639 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.68□□□□□ -2.52
CPSF4O95639 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.68□□□□□ -2.52
CPSF4O95639 U3.27-201ENST00000391237 200 ntBASIC-0.68□□□□□ -2.52
CPSF4O95639 RNU6-394P-201ENST00000410735 107 ntBASIC-0.68□□□□□ -2.52
CPSF4O95639 SNORD57-201ENST00000448188 72 ntBASIC-0.68□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 238.7 ms