Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 MIR29B1-201ENST00000385015 81 ntBASIC-1.74□□□□□ -2.69
SNX4O95219 MIR527-201ENST00000385244 85 ntBASIC-1.74□□□□□ -2.69
SNX4O95219 MIR889-201ENST00000401280 79 ntBASIC-1.74□□□□□ -2.69
SNX4O95219 Y_RNA.651-201ENST00000459380 103 ntBASIC-1.74□□□□□ -2.69
SNX4O95219 AC107027.2-201ENST00000512197 115 ntBASIC-1.74□□□□□ -2.69
SNX4O95219 MIR4308-201ENST00000580634 81 ntBASIC-1.74□□□□□ -2.69
SNX4O95219 U6.106-201ENST00000636360 105 ntBASIC-1.74□□□□□ -2.69
SNX4O95219 MIR6844-201ENST00000637122 62 ntBASIC-1.74□□□□□ -2.69
SNX4O95219 RNU6-664P-201ENST00000362381 107 ntBASIC-1.75□□□□□ -2.69
SNX4O95219 SNORD115-19-201ENST00000363098 82 ntBASIC-1.75□□□□□ -2.69
SNX4O95219 SNORD115-18-201ENST00000363293 82 ntBASIC-1.75□□□□□ -2.69
SNX4O95219 SNORD115-17-201ENST00000364612 82 ntBASIC-1.75□□□□□ -2.69
SNX4O95219 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.75□□□□□ -2.69
SNX4O95219 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.75□□□□□ -2.69
SNX4O95219 RNU2-51P-201ENST00000410708 197 ntBASIC-1.75□□□□□ -2.69
SNX4O95219 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.75□□□□□ -2.69
SNX4O95219 MIR5591-201ENST00000578248 65 ntBASIC-1.75□□□□□ -2.69
SNX4O95219 MIR3646-201ENST00000578301 84 ntBASIC-1.75□□□□□ -2.69
SNX4O95219 RNU6-466P-201ENST00000391224 103 ntBASIC-1.76□□□□□ -2.69
SNX4O95219 RNU6-746P-201ENST00000384112 109 ntBASIC-1.77□□□□□ -2.69
SNX4O95219 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.77□□□□□ -2.69
SNX4O95219 MTND4P29-201ENST00000503122 1372 ntBASIC-1.77□□□□□ -2.69
SNX4O95219 SNORA62.4-201ENST00000365504 151 ntBASIC-1.78□□□□□ -2.69
SNX4O95219 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.78□□□□□ -2.69
SNX4O95219 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.78□□□□□ -2.69
SNX4O95219 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.78□□□□□ -2.69
SNX4O95219 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.78□□□□□ -2.69
SNX4O95219 RNU6-935P-201ENST00000410371 100 ntBASIC-1.78□□□□□ -2.69
SNX4O95219 MIR3163-201ENST00000581592 73 ntBASIC-1.78□□□□□ -2.69
SNX4O95219 MIR6129-201ENST00000616087 109 ntBASIC-1.78□□□□□ -2.69
SNX4O95219 MIR8062-201ENST00000621515 85 ntBASIC-1.78□□□□□ -2.69
SNX4O95219 MIR198-201ENST00000637333 62 ntBASIC-1.78□□□□□ -2.69
SNX4O95219 RNU6-508P-201ENST00000363231 103 ntBASIC-1.79□□□□□ -2.7
SNX4O95219 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.79□□□□□ -2.7
SNX4O95219 MT-TW-201ENST00000387382 68 ntBASIC-1.79□□□□□ -2.7
SNX4O95219 RNU6-576P-201ENST00000390854 102 ntBASIC-1.79□□□□□ -2.7
SNX4O95219 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.79□□□□□ -2.7
SNX4O95219 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.79□□□□□ -2.7
SNX4O95219 RNU6-90P-201ENST00000606352 106 ntBASIC-1.79□□□□□ -2.7
SNX4O95219 RNU6-309P-201ENST00000364573 106 ntBASIC-1.8□□□□□ -2.7
SNX4O95219 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.8□□□□□ -2.7
SNX4O95219 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.8□□□□□ -2.7
SNX4O95219 AP002392.1-201ENST00000537692 208 ntBASIC-1.8□□□□□ -2.7
SNX4O95219 MIR4520-1-201ENST00000582609 70 ntBASIC-1.8□□□□□ -2.7
SNX4O95219 RNU6-208P-201ENST00000362431 107 ntBASIC-1.81□□□□□ -2.7
SNX4O95219 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.81□□□□□ -2.7
SNX4O95219 MIR548G-201ENST00000408442 89 ntBASIC-1.81□□□□□ -2.7
SNX4O95219 SNORD63.1-201ENST00000516178 80 ntBASIC-1.81□□□□□ -2.7
SNX4O95219 MIR4770-201ENST00000579149 58 ntBASIC-1.81□□□□□ -2.7
SNX4O95219 MIR3171-201ENST00000584270 74 ntBASIC-1.81□□□□□ -2.7
SNX4O95219 MIR6888-201ENST00000621977 67 ntBASIC-1.81□□□□□ -2.7
SNX4O95219 RNU6-226P-201ENST00000363778 107 ntBASIC-1.82□□□□□ -2.7
SNX4O95219 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.82□□□□□ -2.7
SNX4O95219 MIR548H3-201ENST00000408771 118 ntBASIC-1.82□□□□□ -2.7
SNX4O95219 AL445584.3-201ENST00000617173 78 ntBASIC-1.82□□□□□ -2.7
SNX4O95219 SNORD38.1-201ENST00000363863 68 ntBASIC-1.83□□□□□ -2.7
SNX4O95219 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.83□□□□□ -2.7
SNX4O95219 RNU4-61P-201ENST00000411243 107 ntBASIC-1.83□□□□□ -2.7
SNX4O95219 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.83□□□□□ -2.7
SNX4O95219 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.83□□□□□ -2.7
SNX4O95219 MIR6502-201ENST00000617296 76 ntBASIC-1.83□□□□□ -2.7
SNX4O95219 AC091912.2-201ENST00000624798 167 ntBASIC-1.83□□□□□ -2.7
SNX4O95219 AL512310.12-203ENST00000640543 90 ntBASIC-1.83□□□□□ -2.7
SNX4O95219 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.84□□□□□ -2.7
SNX4O95219 SNORA63.6-201ENST00000364921 119 ntBASIC-1.84□□□□□ -2.7
SNX4O95219 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.84□□□□□ -2.7
SNX4O95219 MIR451A-201ENST00000385059 72 ntBASIC-1.84□□□□□ -2.7
SNX4O95219 MIR759-201ENST00000390224 91 ntBASIC-1.84□□□□□ -2.7
SNX4O95219 U3.27-201ENST00000391237 200 ntBASIC-1.84□□□□□ -2.7
SNX4O95219 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.84□□□□□ -2.7
SNX4O95219 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.84□□□□□ -2.7
SNX4O95219 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.84□□□□□ -2.7
SNX4O95219 YWHAEP3-201ENST00000582767 121 ntBASIC-1.84□□□□□ -2.7
SNX4O95219 AL353803.5-201ENST00000599815 141 ntBASIC-1.84□□□□□ -2.7
SNX4O95219 AC021753.1-201ENST00000635724 168 ntBASIC-1.84□□□□□ -2.7
SNX4O95219 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.84□□□□□ -2.7
SNX4O95219 RNU6-647P-201ENST00000364243 107 ntBASIC-1.85□□□□□ -2.71
SNX4O95219 RNU6-639P-201ENST00000384074 107 ntBASIC-1.85□□□□□ -2.71
SNX4O95219 SNORA7.5-201ENST00000410672 110 ntBASIC-1.85□□□□□ -2.71
SNX4O95219 RNU6-635P-201ENST00000516651 102 ntBASIC-1.85□□□□□ -2.71
SNX4O95219 AC108081.1-201ENST00000604358 221 ntBASIC-1.85□□□□□ -2.71
SNX4O95219 MIR1255B1-201ENST00000636325 63 ntBASIC-1.85□□□□□ -2.71
SNX4O95219 RNA5SP26-201ENST00000362406 119 ntBASIC-1.86□□□□□ -2.71
SNX4O95219 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.86□□□□□ -2.71
SNX4O95219 RNU6-312P-201ENST00000364629 107 ntBASIC-1.86□□□□□ -2.71
SNX4O95219 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.86□□□□□ -2.71
SNX4O95219 MIR601-201ENST00000385256 79 ntBASIC-1.86□□□□□ -2.71
SNX4O95219 MIR1468-201ENST00000410600 86 ntBASIC-1.86□□□□□ -2.71
SNX4O95219 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.86□□□□□ -2.71
SNX4O95219 AC090617.8-201ENST00000623339 167 ntBASIC-1.86□□□□□ -2.71
SNX4O95219 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.87□□□□□ -2.71
SNX4O95219 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.87□□□□□ -2.71
SNX4O95219 RNA5SP461-201ENST00000516451 104 ntBASIC-1.87□□□□□ -2.71
SNX4O95219 MIR6874-201ENST00000635894 71 ntBASIC-1.87□□□□□ -2.71
SNX4O95219 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.88□□□□□ -2.71
SNX4O95219 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.88□□□□□ -2.71
SNX4O95219 MT-TI-201ENST00000387365 69 ntBASIC-1.88□□□□□ -2.71
SNX4O95219 SNORA26.4-201ENST00000391188 123 ntBASIC-1.88□□□□□ -2.71
SNX4O95219 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.89□□□□□ -2.71
SNX4O95219 SNORD115-33-201ENST00000363723 82 ntBASIC-1.89□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 255.1 ms