Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RNU6-122P-201ENST00000516818 107 ntBASIC2.19□□□□□ -2.06
RNF40O75150 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RNF40O75150 SNORD113-4-201ENST00000364802 75 ntBASIC2.18□□□□□ -2.06
RNF40O75150 MIR17-201ENST00000385012 84 ntBASIC2.18□□□□□ -2.06
RNF40O75150 RNA5SP458-201ENST00000516188 119 ntBASIC2.18□□□□□ -2.06
RNF40O75150 RNU6-295P-201ENST00000516901 104 ntBASIC2.18□□□□□ -2.06
RNF40O75150 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
RNF40O75150 RNA5SP215-201ENST00000363440 122 ntBASIC2.17□□□□□ -2.06
RNF40O75150 RNU6-260P-201ENST00000384092 107 ntBASIC2.17□□□□□ -2.06
RNF40O75150 SNORA48.3-201ENST00000391081 134 ntBASIC2.17□□□□□ -2.06
RNF40O75150 RNU1-119P-201ENST00000391122 165 ntBASIC2.17□□□□□ -2.06
RNF40O75150 SUMO2P12-201ENST00000405924 140 ntBASIC2.17□□□□□ -2.06
RNF40O75150 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.17□□□□□ -2.06
RNF40O75150 AC067940.1-201ENST00000458411 300 ntBASIC2.17□□□□□ -2.06
RNF40O75150 AC131280.1-202ENST00000624067 4211 ntBASIC2.17□□□□□ -2.06
RNF40O75150 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RNF40O75150 AL591704.2-201ENST00000421658 181 ntBASIC2.16□□□□□ -2.06
RNF40O75150 RNU7-104P-201ENST00000459398 79 ntBASIC2.16□□□□□ -2.06
RNF40O75150 MIR6739-201ENST00000622461 75 ntBASIC2.16□□□□□ -2.06
RNF40O75150 RNU6V-201ENST00000384105 107 ntBASIC2.15□□□□□ -2.07
RNF40O75150 MIR934-201ENST00000401241 83 ntBASIC2.15□□□□□ -2.07
RNF40O75150 Y_RNA.722-201ENST00000517279 114 ntBASIC2.15□□□□□ -2.07
RNF40O75150 AL157834.3-201ENST00000615543 103 ntBASIC2.15□□□□□ -2.07
RNF40O75150 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
RNF40O75150 RN7SKP88-201ENST00000516847 250 ntBASIC2.14□□□□□ -2.07
RNF40O75150 7SK.8-201ENST00000612110 250 ntBASIC2.14□□□□□ -2.07
RNF40O75150 7SK.11-201ENST00000615477 250 ntBASIC2.14□□□□□ -2.07
RNF40O75150 7SK.13-201ENST00000622040 250 ntBASIC2.14□□□□□ -2.07
RNF40O75150 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.13□□□□□ -2.07
RNF40O75150 RNU6-990P-201ENST00000364385 104 ntBASIC2.13□□□□□ -2.07
RNF40O75150 SNORA26.9-201ENST00000391322 122 ntBASIC2.13□□□□□ -2.07
RNF40O75150 MIR6845-201ENST00000613182 61 ntBASIC2.13□□□□□ -2.07
RNF40O75150 RNU6-1335P-201ENST00000365426 107 ntBASIC2.12□□□□□ -2.07
RNF40O75150 SNORD41.1-201ENST00000391000 69 ntBASIC2.12□□□□□ -2.07
RNF40O75150 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.12□□□□□ -2.07
RNF40O75150 SNORD79.1-201ENST00000516069 84 ntBASIC2.12□□□□□ -2.07
RNF40O75150 SNORA44.1-201ENST00000517031 108 ntBASIC2.12□□□□□ -2.07
RNF40O75150 MIR3938-201ENST00000582157 103 ntBASIC2.12□□□□□ -2.07
RNF40O75150 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.12□□□□□ -2.07
RNF40O75150 SNORA80D-201ENST00000384488 135 ntBASIC2.11□□□□□ -2.07
RNF40O75150 SNORA75.1-201ENST00000391130 148 ntBASIC2.11□□□□□ -2.07
RNF40O75150 RNU6-994P-201ENST00000410507 111 ntBASIC2.11□□□□□ -2.07
RNF40O75150 RNA5SP489-201ENST00000410986 109 ntBASIC2.11□□□□□ -2.07
RNF40O75150 RNA5SP233-201ENST00000459153 113 ntBASIC2.11□□□□□ -2.07
RNF40O75150 Y_RNA.676-201ENST00000516393 96 ntBASIC2.11□□□□□ -2.07
RNF40O75150 RNU6-1089P-201ENST00000516473 104 ntBASIC2.11□□□□□ -2.07
RNF40O75150 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.11□□□□□ -2.07
RNF40O75150 Y_RNA.783-201ENST00000613546 102 ntBASIC2.11□□□□□ -2.07
RNF40O75150 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.11□□□□□ -2.07
RNF40O75150 MIR583-201ENST00000384846 75 ntBASIC2.1□□□□□ -2.07
RNF40O75150 MIR1827-201ENST00000408549 66 ntBASIC2.1□□□□□ -2.07
RNF40O75150 RNU7-90P-201ENST00000459216 62 ntBASIC2.1□□□□□ -2.07
RNF40O75150 RNU6-92P-201ENST00000605893 104 ntBASIC2.1□□□□□ -2.07
RNF40O75150 RMST_2.1-201ENST00000617263 136 ntBASIC2.1□□□□□ -2.07
RNF40O75150 AC067863.3-201ENST00000624172 122 ntBASIC2.1□□□□□ -2.07
RNF40O75150 RNU6-1184P-201ENST00000384588 108 ntBASIC2.09□□□□□ -2.07
RNF40O75150 MIR520F-201ENST00000384824 87 ntBASIC2.09□□□□□ -2.07
RNF40O75150 MIR100-201ENST00000385259 80 ntBASIC2.09□□□□□ -2.07
RNF40O75150 MT-TY-201ENST00000387409 66 ntBASIC2.09□□□□□ -2.07
RNF40O75150 AC012493.3-201ENST00000604494 112 ntBASIC2.09□□□□□ -2.07
RNF40O75150 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
RNF40O75150 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
RNF40O75150 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
RNF40O75150 RNU1-17P-201ENST00000363022 152 ntBASIC2.08□□□□□ -2.08
RNF40O75150 RNU6-808P-201ENST00000391233 108 ntBASIC2.08□□□□□ -2.08
RNF40O75150 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.08□□□□□ -2.08
RNF40O75150 MIR3198-2-201ENST00000577868 80 ntBASIC2.08□□□□□ -2.08
RNF40O75150 SNORD60.1-201ENST00000362451 73 ntBASIC2.07□□□□□ -2.08
RNF40O75150 RNU6-936P-201ENST00000384005 107 ntBASIC2.07□□□□□ -2.08
RNF40O75150 RNU6-910P-201ENST00000390844 107 ntBASIC2.07□□□□□ -2.08
RNF40O75150 HMGN2P19-201ENST00000425149 265 ntBASIC2.07□□□□□ -2.08
RNF40O75150 AL136317.1-201ENST00000612653 226 ntBASIC2.07□□□□□ -2.08
RNF40O75150 MIR1-1-201ENST00000362147 71 ntBASIC2.06□□□□□ -2.08
RNF40O75150 Y_RNA.338-201ENST00000365320 114 ntBASIC2.06□□□□□ -2.08
RNF40O75150 RNU1-78P-201ENST00000391248 165 ntBASIC2.06□□□□□ -2.08
RNF40O75150 RNA5SP147-201ENST00000516493 109 ntBASIC2.06□□□□□ -2.08
RNF40O75150 AL096840.1-201ENST00000603287 93 ntBASIC2.06□□□□□ -2.08
RNF40O75150 ZNF355P-201ENST00000427301 3216 ntBASIC2.05□□□□□ -2.08
RNF40O75150 RNU7-74P-201ENST00000459104 62 ntBASIC2.05□□□□□ -2.08
RNF40O75150 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.05□□□□□ -2.08
RNF40O75150 RNU6-302P-201ENST00000365249 107 ntBASIC2.04□□□□□ -2.08
RNF40O75150 AC002350.1-201ENST00000490759 375 ntBASIC2.04□□□□□ -2.08
RNF40O75150 MIR4639-201ENST00000584938 69 ntBASIC2.04□□□□□ -2.08
RNF40O75150 Y_RNA.250-201ENST00000364542 110 ntBASIC2.03□□□□□ -2.08
RNF40O75150 AL157398.1-201ENST00000452981 186 ntBASIC2.03□□□□□ -2.08
RNF40O75150 RNA5SP182-201ENST00000516064 82 ntBASIC2.03□□□□□ -2.08
RNF40O75150 RNU6-135P-201ENST00000516769 101 ntBASIC2.03□□□□□ -2.08
RNF40O75150 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
RNF40O75150 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RNF40O75150 SNORD28-201ENST00000384706 75 ntBASIC2.02□□□□□ -2.09
RNF40O75150 MIR644A-201ENST00000385262 94 ntBASIC2.02□□□□□ -2.09
RNF40O75150 MIR676-201ENST00000390702 67 ntBASIC2.02□□□□□ -2.09
RNF40O75150 RNU6-902P-201ENST00000517212 91 ntBASIC2.02□□□□□ -2.09
RNF40O75150 AC018659.1-201ENST00000551083 169 ntBASIC2.02□□□□□ -2.09
RNF40O75150 MIR3122-201ENST00000577243 73 ntBASIC2.02□□□□□ -2.09
RNF40O75150 MIR4422-201ENST00000581938 83 ntBASIC2.02□□□□□ -2.09
RNF40O75150 MIR4781-201ENST00000585250 76 ntBASIC2.02□□□□□ -2.09
RNF40O75150 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RNF40O75150 SNORA7.1-201ENST00000363750 139 ntBASIC2.01□□□□□ -2.09
RNF40O75150 RNU4ATAC4P-201ENST00000516307 126 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 226.9 ms