Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 MIR3920-201ENST00000581751 86 ntBASIC1.43□□□□□ -2.18
TRIM13O60858 RNA5SP403-201ENST00000363598 108 ntBASIC1.42□□□□□ -2.18
TRIM13O60858 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.42□□□□□ -2.18
TRIM13O60858 SNORA31.2-201ENST00000516019 134 ntBASIC1.42□□□□□ -2.18
TRIM13O60858 RNA5SP61-201ENST00000516453 100 ntBASIC1.42□□□□□ -2.18
TRIM13O60858 RNU6-295P-201ENST00000516901 104 ntBASIC1.42□□□□□ -2.18
TRIM13O60858 AC023827.1-201ENST00000569247 97 ntBASIC1.42□□□□□ -2.18
TRIM13O60858 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
TRIM13O60858 Y_RNA.32-201ENST00000362589 110 ntBASIC1.41□□□□□ -2.18
TRIM13O60858 RNU6-1039P-201ENST00000383931 107 ntBASIC1.41□□□□□ -2.18
TRIM13O60858 RNU6-614P-201ENST00000384369 107 ntBASIC1.41□□□□□ -2.18
TRIM13O60858 MTND4LP1-201ENST00000446263 157 ntBASIC1.41□□□□□ -2.18
TRIM13O60858 MIR4804-201ENST00000581683 73 ntBASIC1.41□□□□□ -2.18
TRIM13O60858 U6.59-201ENST00000615686 107 ntBASIC1.41□□□□□ -2.18
TRIM13O60858 MIR7974-201ENST00000615835 79 ntBASIC1.41□□□□□ -2.18
TRIM13O60858 MIR216B-201ENST00000390186 82 ntBASIC1.4□□□□□ -2.19
TRIM13O60858 AL354695.1-201ENST00000427935 228 ntBASIC1.4□□□□□ -2.19
TRIM13O60858 NAMPTP3-201ENST00000569273 224 ntBASIC1.4□□□□□ -2.19
TRIM13O60858 SNORD53B-201ENST00000577887 78 ntBASIC1.4□□□□□ -2.19
TRIM13O60858 uc_338.16-201ENST00000621804 95 ntBASIC1.4□□□□□ -2.19
TRIM13O60858 AC073869.9-201ENST00000641610 120 ntBASIC1.4□□□□□ -2.19
TRIM13O60858 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
TRIM13O60858 SNORD115-24-201ENST00000363528 82 ntBASIC1.39□□□□□ -2.19
TRIM13O60858 RNU6-668P-201ENST00000364180 107 ntBASIC1.39□□□□□ -2.19
TRIM13O60858 Y_RNA.375-201ENST00000365625 101 ntBASIC1.39□□□□□ -2.19
TRIM13O60858 SNORA67.6-201ENST00000391093 99 ntBASIC1.39□□□□□ -2.19
TRIM13O60858 SNORA11.2-201ENST00000408318 127 ntBASIC1.39□□□□□ -2.19
TRIM13O60858 RNU7-56P-201ENST00000458744 62 ntBASIC1.39□□□□□ -2.19
TRIM13O60858 RNU7-21P-201ENST00000459430 62 ntBASIC1.39□□□□□ -2.19
TRIM13O60858 SNORA31.14-201ENST00000516728 116 ntBASIC1.39□□□□□ -2.19
TRIM13O60858 SNORA31.24-201ENST00000517232 57 ntBASIC1.39□□□□□ -2.19
TRIM13O60858 RNU7-161P-201ENST00000517289 62 ntBASIC1.39□□□□□ -2.19
TRIM13O60858 AL359821.1-201ENST00000605519 182 ntBASIC1.39□□□□□ -2.19
TRIM13O60858 MIR6509-201ENST00000614603 85 ntBASIC1.39□□□□□ -2.19
TRIM13O60858 MIR548O2-201ENST00000616090 70 ntBASIC1.39□□□□□ -2.19
TRIM13O60858 MIR617-201ENST00000385030 97 ntBASIC1.38□□□□□ -2.19
TRIM13O60858 RNU1-119P-201ENST00000391122 165 ntBASIC1.38□□□□□ -2.19
TRIM13O60858 SNORA26.9-201ENST00000391322 122 ntBASIC1.38□□□□□ -2.19
TRIM13O60858 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.38□□□□□ -2.19
TRIM13O60858 AL591704.2-201ENST00000421658 181 ntBASIC1.38□□□□□ -2.19
TRIM13O60858 snoU13.26-201ENST00000459452 105 ntBASIC1.38□□□□□ -2.19
TRIM13O60858 RNU6-542P-201ENST00000516405 103 ntBASIC1.38□□□□□ -2.19
TRIM13O60858 Y_RNA.174-201ENST00000363781 105 ntBASIC1.37□□□□□ -2.19
TRIM13O60858 RNU6-829P-201ENST00000363700 112 ntBASIC1.36□□□□□ -2.19
TRIM13O60858 SNORA80D-201ENST00000384488 135 ntBASIC1.36□□□□□ -2.19
TRIM13O60858 MIR203A-201ENST00000384836 110 ntBASIC1.36□□□□□ -2.19
TRIM13O60858 MIR758-201ENST00000390227 88 ntBASIC1.36□□□□□ -2.19
TRIM13O60858 MIR1261-201ENST00000408659 82 ntBASIC1.36□□□□□ -2.19
TRIM13O60858 RNU6-994P-201ENST00000410507 111 ntBASIC1.36□□□□□ -2.19
TRIM13O60858 AL157834.3-201ENST00000615543 103 ntBASIC1.36□□□□□ -2.19
TRIM13O60858 AC092634.7-201ENST00000621022 103 ntBASIC1.36□□□□□ -2.19
TRIM13O60858 RNU6-54P-201ENST00000365563 107 ntBASIC1.35□□□□□ -2.19
TRIM13O60858 MIR519E-201ENST00000385075 84 ntBASIC1.35□□□□□ -2.19
TRIM13O60858 MIR100-201ENST00000385259 80 ntBASIC1.35□□□□□ -2.19
TRIM13O60858 RNU6-910P-201ENST00000390844 107 ntBASIC1.35□□□□□ -2.19
TRIM13O60858 MIR1289-2-201ENST00000408360 111 ntBASIC1.35□□□□□ -2.19
TRIM13O60858 RNU7-104P-201ENST00000459398 79 ntBASIC1.35□□□□□ -2.19
TRIM13O60858 MIR3657-201ENST00000584818 117 ntBASIC1.35□□□□□ -2.19
TRIM13O60858 Y_RNA.236-201ENST00000364427 111 ntBASIC1.34□□□□□ -2.19
TRIM13O60858 RNU6-645P-201ENST00000364649 106 ntBASIC1.34□□□□□ -2.19
TRIM13O60858 RNA5SP190-201ENST00000365222 118 ntBASIC1.34□□□□□ -2.19
TRIM13O60858 RNU1-123P-201ENST00000458950 160 ntBASIC1.34□□□□□ -2.19
TRIM13O60858 RNU7-90P-201ENST00000459216 62 ntBASIC1.34□□□□□ -2.19
TRIM13O60858 SNORA25.5-201ENST00000363782 126 ntBASIC1.33□□□□□ -2.2
TRIM13O60858 MIR520F-201ENST00000384824 87 ntBASIC1.33□□□□□ -2.2
TRIM13O60858 MIR7-2-201ENST00000384970 110 ntBASIC1.33□□□□□ -2.2
TRIM13O60858 AC067940.1-201ENST00000458411 300 ntBASIC1.33□□□□□ -2.2
TRIM13O60858 RPS29P23-201ENST00000458635 123 ntBASIC1.33□□□□□ -2.2
TRIM13O60858 SNORD42B-201ENST00000458893 67 ntBASIC1.33□□□□□ -2.2
TRIM13O60858 SNORD79.1-201ENST00000516069 84 ntBASIC1.33□□□□□ -2.2
TRIM13O60858 SNORA70.22-201ENST00000517160 124 ntBASIC1.33□□□□□ -2.2
TRIM13O60858 MIR1-1-201ENST00000362147 71 ntBASIC1.32□□□□□ -2.2
TRIM13O60858 MIR26B-201ENST00000362251 77 ntBASIC1.32□□□□□ -2.2
TRIM13O60858 SNORD12-201ENST00000391002 90 ntBASIC1.32□□□□□ -2.2
TRIM13O60858 SCARNA21.1-201ENST00000515996 128 ntBASIC1.32□□□□□ -2.2
TRIM13O60858 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
TRIM13O60858 RNU6-1079P-201ENST00000362861 110 ntBASIC1.31□□□□□ -2.2
TRIM13O60858 RNA5SP192-201ENST00000364404 120 ntBASIC1.31□□□□□ -2.2
TRIM13O60858 RNU6-260P-201ENST00000384092 107 ntBASIC1.31□□□□□ -2.2
TRIM13O60858 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.31□□□□□ -2.2
TRIM13O60858 MIR1827-201ENST00000408549 66 ntBASIC1.31□□□□□ -2.2
TRIM13O60858 SNORA40.17-201ENST00000517256 115 ntBASIC1.31□□□□□ -2.2
TRIM13O60858 RMST_2.1-201ENST00000617263 136 ntBASIC1.31□□□□□ -2.2
TRIM13O60858 SNORA2.1-201ENST00000363089 137 ntBASIC1.3□□□□□ -2.2
TRIM13O60858 RNU6V-201ENST00000384105 107 ntBASIC1.3□□□□□ -2.2
TRIM13O60858 SNORA67.5-201ENST00000391036 107 ntBASIC1.3□□□□□ -2.2
TRIM13O60858 SNORD13-201ENST00000459299 104 ntBASIC1.3□□□□□ -2.2
TRIM13O60858 MIR466-201ENST00000580653 84 ntBASIC1.3□□□□□ -2.2
TRIM13O60858 MIR7843-201ENST00000622274 79 ntBASIC1.3□□□□□ -2.2
TRIM13O60858 AC067863.3-201ENST00000624172 122 ntBASIC1.3□□□□□ -2.2
TRIM13O60858 RNU6-940P-201ENST00000363433 104 ntBASIC1.29□□□□□ -2.2
TRIM13O60858 MIR222-201ENST00000384992 110 ntBASIC1.29□□□□□ -2.2
TRIM13O60858 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
TRIM13O60858 AL136317.1-201ENST00000612653 226 ntBASIC1.29□□□□□ -2.2
TRIM13O60858 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.29□□□□□ -2.2
TRIM13O60858 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.28□□□□□ -2.2
TRIM13O60858 SNORA25-201ENST00000384384 134 ntBASIC1.28□□□□□ -2.2
TRIM13O60858 SNORD41.1-201ENST00000391000 69 ntBASIC1.28□□□□□ -2.2
TRIM13O60858 RNA5SP299-201ENST00000391203 116 ntBASIC1.28□□□□□ -2.2
TRIM13O60858 RNU7-74P-201ENST00000459104 62 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 174.9 ms