Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC109327.2-201ENST00000448339 378 ntBASIC-0.18□□□□□ -2.44
SNX3O60493 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.18□□□□□ -2.44
SNX3O60493 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.18□□□□□ -2.44
SNX3O60493 MIR3613-201ENST00000579844 87 ntBASIC-0.18□□□□□ -2.44
SNX3O60493 MIR6514-201ENST00000622549 70 ntBASIC-0.18□□□□□ -2.44
SNX3O60493 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.19□□□□□ -2.44
SNX3O60493 SNORA32.1-201ENST00000364514 115 ntBASIC-0.19□□□□□ -2.44
SNX3O60493 RNU6-746P-201ENST00000384112 109 ntBASIC-0.19□□□□□ -2.44
SNX3O60493 MIR1273G-201ENST00000577677 100 ntBASIC-0.19□□□□□ -2.44
SNX3O60493 RNU6-86P-201ENST00000606534 107 ntBASIC-0.19□□□□□ -2.44
SNX3O60493 RNU6-704P-201ENST00000364162 103 ntBASIC-0.2□□□□□ -2.44
SNX3O60493 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.2□□□□□ -2.44
SNX3O60493 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.2□□□□□ -2.44
SNX3O60493 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.2□□□□□ -2.44
SNX3O60493 MIR5009-201ENST00000578736 100 ntBASIC-0.2□□□□□ -2.44
SNX3O60493 MIR8087-201ENST00000612745 78 ntBASIC-0.2□□□□□ -2.44
SNX3O60493 AC025521.1-201ENST00000621624 286 ntBASIC-0.2□□□□□ -2.44
SNX3O60493 SNORD101-201ENST00000384027 73 ntBASIC-0.21□□□□□ -2.44
SNX3O60493 MT-TY-201ENST00000387409 66 ntBASIC-0.21□□□□□ -2.44
SNX3O60493 CR383656.4-201ENST00000546909 122 ntBASIC-0.21□□□□□ -2.44
SNX3O60493 MIR4696-201ENST00000581431 70 ntBASIC-0.21□□□□□ -2.44
SNX3O60493 uc_338.10-201ENST00000621872 182 ntBASIC-0.21□□□□□ -2.44
SNX3O60493 RNU6-664P-201ENST00000362381 107 ntBASIC-0.22□□□□□ -2.44
SNX3O60493 SNORD116-14-201ENST00000383894 92 ntBASIC-0.22□□□□□ -2.44
SNX3O60493 SNORD116-17-201ENST00000383929 92 ntBASIC-0.22□□□□□ -2.44
SNX3O60493 SNORD116-15-201ENST00000384445 92 ntBASIC-0.22□□□□□ -2.44
SNX3O60493 SNORD116-19-201ENST00000384729 92 ntBASIC-0.22□□□□□ -2.44
SNX3O60493 MIR106A-201ENST00000384870 81 ntBASIC-0.22□□□□□ -2.44
SNX3O60493 MIR548AE1-201ENST00000583292 70 ntBASIC-0.22□□□□□ -2.44
SNX3O60493 AL670379.3-201ENST00000605040 251 ntBASIC-0.22□□□□□ -2.44
SNX3O60493 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.22□□□□□ -2.44
SNX3O60493 RNU6-302P-201ENST00000365249 107 ntBASIC-0.23□□□□□ -2.45
SNX3O60493 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.23□□□□□ -2.45
SNX3O60493 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.23□□□□□ -2.45
SNX3O60493 AC104692.1-201ENST00000472406 90 ntBASIC-0.23□□□□□ -2.45
SNX3O60493 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.23□□□□□ -2.45
SNX3O60493 RNU7-188P-201ENST00000517063 64 ntBASIC-0.23□□□□□ -2.45
SNX3O60493 RN7SL660P-201ENST00000614852 299 ntBASIC-0.23□□□□□ -2.45
SNX3O60493 MIR1295B-201ENST00000636144 60 ntBASIC-0.23□□□□□ -2.45
SNX3O60493 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.24□□□□□ -2.45
SNX3O60493 MIR489-201ENST00000384923 84 ntBASIC-0.24□□□□□ -2.45
SNX3O60493 MIR1197-201ENST00000408818 88 ntBASIC-0.25□□□□□ -2.45
SNX3O60493 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.25□□□□□ -2.45
SNX3O60493 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.25□□□□□ -2.45
SNX3O60493 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.25□□□□□ -2.45
SNX3O60493 MIR148A-201ENST00000362215 68 ntBASIC-0.26□□□□□ -2.45
SNX3O60493 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.26□□□□□ -2.45
SNX3O60493 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.26□□□□□ -2.45
SNX3O60493 SNORD45B-201ENST00000364617 72 ntBASIC-0.26□□□□□ -2.45
SNX3O60493 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.26□□□□□ -2.45
SNX3O60493 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.26□□□□□ -2.45
SNX3O60493 RNU6V-201ENST00000384105 107 ntBASIC-0.26□□□□□ -2.45
SNX3O60493 RNU6-75P-201ENST00000515944 104 ntBASIC-0.26□□□□□ -2.45
SNX3O60493 AL513043.2-201ENST00000573941 143 ntBASIC-0.26□□□□□ -2.45
SNX3O60493 MIR4439-201ENST00000583746 80 ntBASIC-0.26□□□□□ -2.45
SNX3O60493 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.27□□□□□ -2.45
SNX3O60493 RNU6-154P-201ENST00000384306 106 ntBASIC-0.27□□□□□ -2.45
SNX3O60493 RNU6-935P-201ENST00000410371 100 ntBASIC-0.27□□□□□ -2.45
SNX3O60493 RNU6-46P-201ENST00000383860 107 ntBASIC-0.28□□□□□ -2.45
SNX3O60493 RNU6-880P-201ENST00000384526 107 ntBASIC-0.28□□□□□ -2.45
SNX3O60493 SNORD114-29-201ENST00000364819 70 ntBASIC-0.29□□□□□ -2.46
SNX3O60493 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.29□□□□□ -2.46
SNX3O60493 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.29□□□□□ -2.46
SNX3O60493 SNORD116-21-201ENST00000384507 92 ntBASIC-0.29□□□□□ -2.46
SNX3O60493 RNU6-959P-201ENST00000384671 107 ntBASIC-0.29□□□□□ -2.46
SNX3O60493 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.29□□□□□ -2.46
SNX3O60493 MIR216B-201ENST00000390186 82 ntBASIC-0.29□□□□□ -2.46
SNX3O60493 RNU6-65P-201ENST00000516332 98 ntBASIC-0.29□□□□□ -2.46
SNX3O60493 RNA5SP330-201ENST00000517096 96 ntBASIC-0.29□□□□□ -2.46
SNX3O60493 SNORA18.1-201ENST00000363418 128 ntBASIC-0.3□□□□□ -2.46
SNX3O60493 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.3□□□□□ -2.46
SNX3O60493 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.3□□□□□ -2.46
SNX3O60493 SNORD114-12-201ENST00000365400 75 ntBASIC-0.3□□□□□ -2.46
SNX3O60493 RNU6-813P-201ENST00000384691 107 ntBASIC-0.3□□□□□ -2.46
SNX3O60493 RNU7-85P-201ENST00000458851 63 ntBASIC-0.3□□□□□ -2.46
SNX3O60493 MIR4536-1-201ENST00000583537 88 ntBASIC-0.3□□□□□ -2.46
SNX3O60493 AC103810.7-201ENST00000607821 91 ntBASIC-0.3□□□□□ -2.46
SNX3O60493 MIR548O2-201ENST00000616090 70 ntBASIC-0.3□□□□□ -2.46
SNX3O60493 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.31□□□□□ -2.46
SNX3O60493 RNU4-36P-201ENST00000364294 144 ntBASIC-0.31□□□□□ -2.46
SNX3O60493 MIR451A-201ENST00000385059 72 ntBASIC-0.31□□□□□ -2.46
SNX3O60493 SNORD4A-201ENST00000459174 72 ntBASIC-0.31□□□□□ -2.46
SNX3O60493 RNU6-175P-201ENST00000516896 107 ntBASIC-0.31□□□□□ -2.46
SNX3O60493 MIR548Z-201ENST00000584743 97 ntBASIC-0.31□□□□□ -2.46
SNX3O60493 MIR2909-201ENST00000617113 69 ntBASIC-0.31□□□□□ -2.46
SNX3O60493 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.32□□□□□ -2.46
SNX3O60493 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.32□□□□□ -2.46
SNX3O60493 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.32□□□□□ -2.46
SNX3O60493 RNU6-795P-201ENST00000516323 103 ntBASIC-0.32□□□□□ -2.46
SNX3O60493 RNU6-412P-201ENST00000516434 106 ntBASIC-0.32□□□□□ -2.46
SNX3O60493 MIR4777-201ENST00000583710 86 ntBASIC-0.32□□□□□ -2.46
SNX3O60493 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.32□□□□□ -2.46
SNX3O60493 MIR652-201ENST00000385278 98 ntBASIC-0.33□□□□□ -2.46
SNX3O60493 RNU6-644P-201ENST00000391155 98 ntBASIC-0.33□□□□□ -2.46
SNX3O60493 MIR6507-201ENST00000613630 70 ntBASIC-0.33□□□□□ -2.46
SNX3O60493 AC012531.4-201ENST00000616509 177 ntBASIC-0.33□□□□□ -2.46
SNX3O60493 SNORD49B-201ENST00000365172 72 ntBASIC-0.34□□□□□ -2.46
SNX3O60493 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.34□□□□□ -2.46
SNX3O60493 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.34□□□□□ -2.46
SNX3O60493 SNORA19.1-201ENST00000410656 129 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms