Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RNU4-61P-201ENST00000411243 107 ntBASIC-1.48□□□□□ -2.65
SGCEO43556 MTND3P22-201ENST00000510932 243 ntBASIC-1.48□□□□□ -2.65
SGCEO43556 SNORD115-19-201ENST00000363098 82 ntBASIC-1.49□□□□□ -2.65
SGCEO43556 SNORD115-18-201ENST00000363293 82 ntBASIC-1.49□□□□□ -2.65
SGCEO43556 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.49□□□□□ -2.65
SGCEO43556 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.49□□□□□ -2.65
SGCEO43556 SNORD115-17-201ENST00000364612 82 ntBASIC-1.49□□□□□ -2.65
SGCEO43556 RNU6-312P-201ENST00000364629 107 ntBASIC-1.49□□□□□ -2.65
SGCEO43556 RNU6-643P-201ENST00000384018 107 ntBASIC-1.49□□□□□ -2.65
SGCEO43556 MIR451A-201ENST00000385059 72 ntBASIC-1.49□□□□□ -2.65
SGCEO43556 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.49□□□□□ -2.65
SGCEO43556 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.49□□□□□ -2.65
SGCEO43556 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.49□□□□□ -2.65
SGCEO43556 AP002392.1-201ENST00000537692 208 ntBASIC-1.49□□□□□ -2.65
SGCEO43556 MIR4756-201ENST00000577874 78 ntBASIC-1.49□□□□□ -2.65
SGCEO43556 MIR4464-201ENST00000580818 92 ntBASIC-1.49□□□□□ -2.65
SGCEO43556 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.5□□□□□ -2.65
SGCEO43556 RNU6-578P-201ENST00000390980 103 ntBASIC-1.5□□□□□ -2.65
SGCEO43556 AC108019.1-201ENST00000512540 175 ntBASIC-1.5□□□□□ -2.65
SGCEO43556 SNORD63.1-201ENST00000516178 80 ntBASIC-1.5□□□□□ -2.65
SGCEO43556 RNU6-118P-201ENST00000516552 102 ntBASIC-1.5□□□□□ -2.65
SGCEO43556 RNU6-521P-201ENST00000516663 105 ntBASIC-1.5□□□□□ -2.65
SGCEO43556 U6atac.1-201ENST00000616025 117 ntBASIC-1.5□□□□□ -2.65
SGCEO43556 AL627230.5-201ENST00000619807 58 ntBASIC-1.5□□□□□ -2.65
SGCEO43556 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.51□□□□□ -2.65
SGCEO43556 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.51□□□□□ -2.65
SGCEO43556 Y_RNA.262-201ENST00000364641 102 ntBASIC-1.51□□□□□ -2.65
SGCEO43556 Y_RNA.579-201ENST00000390939 94 ntBASIC-1.51□□□□□ -2.65
SGCEO43556 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.51□□□□□ -2.65
SGCEO43556 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.51□□□□□ -2.65
SGCEO43556 MIR4282-201ENST00000583613 67 ntBASIC-1.51□□□□□ -2.65
SGCEO43556 RNU6-208P-201ENST00000362431 107 ntBASIC-1.52□□□□□ -2.65
SGCEO43556 RNU6-647P-201ENST00000364243 107 ntBASIC-1.52□□□□□ -2.65
SGCEO43556 RNU6-806P-201ENST00000365147 105 ntBASIC-1.52□□□□□ -2.65
SGCEO43556 MTATP6P21-201ENST00000440681 189 ntBASIC-1.52□□□□□ -2.65
SGCEO43556 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.52□□□□□ -2.65
SGCEO43556 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.52□□□□□ -2.65
SGCEO43556 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.53□□□□□ -2.65
SGCEO43556 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.53□□□□□ -2.65
SGCEO43556 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.54□□□□□ -2.66
SGCEO43556 RNY4P20-201ENST00000516678 93 ntBASIC-1.54□□□□□ -2.66
SGCEO43556 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.54□□□□□ -2.66
SGCEO43556 Y_RNA.26-201ENST00000362539 101 ntBASIC-1.55□□□□□ -2.66
SGCEO43556 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.55□□□□□ -2.66
SGCEO43556 RNU6-164P-201ENST00000364604 103 ntBASIC-1.55□□□□□ -2.66
SGCEO43556 MIR496-201ENST00000385226 102 ntBASIC-1.55□□□□□ -2.66
SGCEO43556 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.55□□□□□ -2.66
SGCEO43556 MIR6888-201ENST00000621977 67 ntBASIC-1.55□□□□□ -2.66
SGCEO43556 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.56□□□□□ -2.66
SGCEO43556 MIR548G-201ENST00000408442 89 ntBASIC-1.56□□□□□ -2.66
SGCEO43556 SNORD75.2-201ENST00000408784 58 ntBASIC-1.56□□□□□ -2.66
SGCEO43556 Y_RNA.651-201ENST00000459380 103 ntBASIC-1.56□□□□□ -2.66
SGCEO43556 RNU6-90P-201ENST00000606352 106 ntBASIC-1.56□□□□□ -2.66
SGCEO43556 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.57□□□□□ -2.66
SGCEO43556 Y_RNA.210-201ENST00000364161 110 ntBASIC-1.57□□□□□ -2.66
SGCEO43556 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.57□□□□□ -2.66
SGCEO43556 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.57□□□□□ -2.66
SGCEO43556 AL078595.1-201ENST00000404458 226 ntBASIC-1.57□□□□□ -2.66
SGCEO43556 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.57□□□□□ -2.66
SGCEO43556 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.57□□□□□ -2.66
SGCEO43556 MIR4308-201ENST00000580634 81 ntBASIC-1.57□□□□□ -2.66
SGCEO43556 U2.14-201ENST00000615943 113 ntBASIC-1.57□□□□□ -2.66
SGCEO43556 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.57□□□□□ -2.66
SGCEO43556 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.58□□□□□ -2.66
SGCEO43556 SNORD38.1-201ENST00000363863 68 ntBASIC-1.58□□□□□ -2.66
SGCEO43556 SNORD115-22-201ENST00000364456 82 ntBASIC-1.58□□□□□ -2.66
SGCEO43556 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.58□□□□□ -2.66
SGCEO43556 MTND5P22-201ENST00000458380 195 ntBASIC-1.58□□□□□ -2.66
SGCEO43556 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.58□□□□□ -2.66
SGCEO43556 RNU7-6P-201ENST00000516845 62 ntBASIC-1.58□□□□□ -2.66
SGCEO43556 MIR664B-201ENST00000626756 61 ntBASIC-1.58□□□□□ -2.66
SGCEO43556 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.59□□□□□ -2.66
SGCEO43556 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.59□□□□□ -2.66
SGCEO43556 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.59□□□□□ -2.66
SGCEO43556 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.59□□□□□ -2.66
SGCEO43556 RNU6-75P-201ENST00000515944 104 ntBASIC-1.59□□□□□ -2.66
SGCEO43556 AC090617.8-201ENST00000623339 167 ntBASIC-1.59□□□□□ -2.66
SGCEO43556 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-1.59□□□□□ -2.66
SGCEO43556 RNU6-495P-201ENST00000362995 107 ntBASIC-1.6□□□□□ -2.67
SGCEO43556 RNU6-818P-201ENST00000364837 108 ntBASIC-1.6□□□□□ -2.67
SGCEO43556 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.6□□□□□ -2.67
SGCEO43556 SNORA26.4-201ENST00000391188 123 ntBASIC-1.6□□□□□ -2.67
SGCEO43556 MIR1207-201ENST00000408249 87 ntBASIC-1.6□□□□□ -2.67
SGCEO43556 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.6□□□□□ -2.67
SGCEO43556 MIR1255B1-201ENST00000636325 63 ntBASIC-1.6□□□□□ -2.67
SGCEO43556 U6.96-201ENST00000636425 70 ntBASIC-1.6□□□□□ -2.67
SGCEO43556 Y_RNA.58-201ENST00000362807 102 ntBASIC-1.61□□□□□ -2.67
SGCEO43556 SNORD115-33-201ENST00000363723 82 ntBASIC-1.61□□□□□ -2.67
SGCEO43556 RNY3P1-201ENST00000365085 102 ntBASIC-1.61□□□□□ -2.67
SGCEO43556 RNU6-768P-201ENST00000384683 107 ntBASIC-1.61□□□□□ -2.67
SGCEO43556 MT-TI-201ENST00000387365 69 ntBASIC-1.61□□□□□ -2.67
SGCEO43556 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.61□□□□□ -2.67
SGCEO43556 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-1.61□□□□□ -2.67
SGCEO43556 RNU6-719P-201ENST00000516671 104 ntBASIC-1.61□□□□□ -2.67
SGCEO43556 RNU6-980P-201ENST00000516925 103 ntBASIC-1.61□□□□□ -2.67
SGCEO43556 MIR3139-201ENST00000579145 76 ntBASIC-1.61□□□□□ -2.67
SGCEO43556 MIR3149-201ENST00000584629 83 ntBASIC-1.61□□□□□ -2.67
SGCEO43556 AL137067.1-201ENST00000615933 120 ntBASIC-1.61□□□□□ -2.67
SGCEO43556 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.61□□□□□ -2.67
SGCEO43556 RNU6-508P-201ENST00000363231 103 ntBASIC-1.62□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 204.1 ms