Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 MT-TY-201ENST00000387409 66 ntBASIC-0.2□□□□□ -2.44
MSH4O15457 SNORA40-201ENST00000388090 126 ntBASIC-0.2□□□□□ -2.44
MSH4O15457 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.2□□□□□ -2.44
MSH4O15457 SNORD4A-201ENST00000459174 72 ntBASIC-0.2□□□□□ -2.44
MSH4O15457 snoU13.11-201ENST00000459219 104 ntBASIC-0.2□□□□□ -2.44
MSH4O15457 RNU6-794P-201ENST00000517261 64 ntBASIC-0.2□□□□□ -2.44
MSH4O15457 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.2□□□□□ -2.44
MSH4O15457 uc_338.10-201ENST00000621872 182 ntBASIC-0.2□□□□□ -2.44
MSH4O15457 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.21□□□□□ -2.44
MSH4O15457 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.21□□□□□ -2.44
MSH4O15457 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.21□□□□□ -2.44
MSH4O15457 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.21□□□□□ -2.44
MSH4O15457 MIR1912-201ENST00000410389 80 ntBASIC-0.21□□□□□ -2.44
MSH4O15457 RNU6-971P-201ENST00000516920 106 ntBASIC-0.21□□□□□ -2.44
MSH4O15457 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.21□□□□□ -2.44
MSH4O15457 MIR6507-201ENST00000613630 70 ntBASIC-0.21□□□□□ -2.44
MSH4O15457 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.21□□□□□ -2.44
MSH4O15457 AL035470.1-201ENST00000622571 220 ntBASIC-0.21□□□□□ -2.44
MSH4O15457 AL157777.2-201ENST00000258070 137 ntBASIC-0.22□□□□□ -2.44
MSH4O15457 MIR655-201ENST00000362159 97 ntBASIC-0.22□□□□□ -2.44
MSH4O15457 SNORD114-31-201ENST00000363219 75 ntBASIC-0.22□□□□□ -2.44
MSH4O15457 U8.6-201ENST00000364939 135 ntBASIC-0.22□□□□□ -2.44
MSH4O15457 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.22□□□□□ -2.44
MSH4O15457 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.22□□□□□ -2.44
MSH4O15457 MIR577-201ENST00000385196 96 ntBASIC-0.22□□□□□ -2.44
MSH4O15457 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.22□□□□□ -2.44
MSH4O15457 AC007012.1-201ENST00000567192 175 ntBASIC-0.22□□□□□ -2.44
MSH4O15457 MIR4679-2-201ENST00000578358 77 ntBASIC-0.22□□□□□ -2.44
MSH4O15457 MIR4696-201ENST00000581431 70 ntBASIC-0.22□□□□□ -2.44
MSH4O15457 RNU6-86P-201ENST00000606534 107 ntBASIC-0.22□□□□□ -2.44
MSH4O15457 RNA5SP98-201ENST00000363158 137 ntBASIC-0.23□□□□□ -2.45
MSH4O15457 RNY1P5-201ENST00000383890 115 ntBASIC-0.23□□□□□ -2.45
MSH4O15457 MIR548A1-201ENST00000385041 97 ntBASIC-0.23□□□□□ -2.45
MSH4O15457 RNA5SP395-201ENST00000516567 118 ntBASIC-0.23□□□□□ -2.45
MSH4O15457 RNU6-175P-201ENST00000516896 107 ntBASIC-0.23□□□□□ -2.45
MSH4O15457 RNU6-664P-201ENST00000362381 107 ntBASIC-0.24□□□□□ -2.45
MSH4O15457 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.24□□□□□ -2.45
MSH4O15457 SNORD114-29-201ENST00000364819 70 ntBASIC-0.24□□□□□ -2.45
MSH4O15457 SNORD49B-201ENST00000365172 72 ntBASIC-0.24□□□□□ -2.45
MSH4O15457 MIR539-201ENST00000365690 78 ntBASIC-0.24□□□□□ -2.45
MSH4O15457 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.24□□□□□ -2.45
MSH4O15457 SNORD101-201ENST00000384027 73 ntBASIC-0.24□□□□□ -2.45
MSH4O15457 RNU6-154P-201ENST00000384306 106 ntBASIC-0.24□□□□□ -2.45
MSH4O15457 RNU6-907P-201ENST00000390924 102 ntBASIC-0.24□□□□□ -2.45
MSH4O15457 RNU6-466P-201ENST00000391224 103 ntBASIC-0.24□□□□□ -2.45
MSH4O15457 AC244250.2-201ENST00000418731 148 ntBASIC-0.24□□□□□ -2.45
MSH4O15457 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.24□□□□□ -2.45
MSH4O15457 MIR4694-201ENST00000578534 80 ntBASIC-0.24□□□□□ -2.45
MSH4O15457 AC096720.1-201ENST00000604441 183 ntBASIC-0.24□□□□□ -2.45
MSH4O15457 MIR3666-201ENST00000607845 111 ntBASIC-0.24□□□□□ -2.45
MSH4O15457 AC025521.1-201ENST00000621624 286 ntBASIC-0.24□□□□□ -2.45
MSH4O15457 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.25□□□□□ -2.45
MSH4O15457 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.25□□□□□ -2.45
MSH4O15457 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.25□□□□□ -2.45
MSH4O15457 RNA5SP205-201ENST00000364653 136 ntBASIC-0.25□□□□□ -2.45
MSH4O15457 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.25□□□□□ -2.45
MSH4O15457 RNU6-811P-201ENST00000384069 107 ntBASIC-0.25□□□□□ -2.45
MSH4O15457 RNU6-480P-201ENST00000384332 107 ntBASIC-0.25□□□□□ -2.45
MSH4O15457 RNU6-35P-201ENST00000384530 107 ntBASIC-0.25□□□□□ -2.45
MSH4O15457 RNU6-75P-201ENST00000515944 104 ntBASIC-0.25□□□□□ -2.45
MSH4O15457 MIR5589-201ENST00000579442 60 ntBASIC-0.25□□□□□ -2.45
MSH4O15457 MIR3613-201ENST00000579844 87 ntBASIC-0.25□□□□□ -2.45
MSH4O15457 MIR548O2-201ENST00000616090 70 ntBASIC-0.25□□□□□ -2.45
MSH4O15457 RNU6-832P-201ENST00000363319 107 ntBASIC-0.26□□□□□ -2.45
MSH4O15457 MIR216B-201ENST00000390186 82 ntBASIC-0.26□□□□□ -2.45
MSH4O15457 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.26□□□□□ -2.45
MSH4O15457 RNA5SP300-201ENST00000391197 107 ntBASIC-0.26□□□□□ -2.45
MSH4O15457 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.26□□□□□ -2.45
MSH4O15457 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.26□□□□□ -2.45
MSH4O15457 MIR3914-2-201ENST00000637339 95 ntBASIC-0.26□□□□□ -2.45
MSH4O15457 RNY3P2-201ENST00000362918 102 ntBASIC-0.27□□□□□ -2.45
MSH4O15457 MIR652-201ENST00000385278 98 ntBASIC-0.27□□□□□ -2.45
MSH4O15457 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.27□□□□□ -2.45
MSH4O15457 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.27□□□□□ -2.45
MSH4O15457 AC068339.1-201ENST00000526965 141 ntBASIC-0.27□□□□□ -2.45
MSH4O15457 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.27□□□□□ -2.45
MSH4O15457 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.27□□□□□ -2.45
MSH4O15457 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.28□□□□□ -2.45
MSH4O15457 SNORD50.2-201ENST00000365465 70 ntBASIC-0.28□□□□□ -2.45
MSH4O15457 RNU6-80P-201ENST00000384195 107 ntBASIC-0.28□□□□□ -2.45
MSH4O15457 RNU6-935P-201ENST00000410371 100 ntBASIC-0.28□□□□□ -2.45
MSH4O15457 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.28□□□□□ -2.45
MSH4O15457 SNORD33.1-201ENST00000516213 88 ntBASIC-0.28□□□□□ -2.45
MSH4O15457 RNU6-719P-201ENST00000516671 104 ntBASIC-0.28□□□□□ -2.45
MSH4O15457 RNU6-762P-201ENST00000517107 102 ntBASIC-0.28□□□□□ -2.45
MSH4O15457 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.29□□□□□ -2.46
MSH4O15457 MIR20A-201ENST00000362279 71 ntBASIC-0.29□□□□□ -2.46
MSH4O15457 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.29□□□□□ -2.46
MSH4O15457 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.29□□□□□ -2.46
MSH4O15457 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.29□□□□□ -2.46
MSH4O15457 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.29□□□□□ -2.46
MSH4O15457 AC244090.1-201ENST00000441884 93 ntBASIC-0.29□□□□□ -2.46
MSH4O15457 RNU6-659P-201ENST00000516454 104 ntBASIC-0.29□□□□□ -2.46
MSH4O15457 MIR5009-201ENST00000578736 100 ntBASIC-0.29□□□□□ -2.46
MSH4O15457 MIR4439-201ENST00000583746 80 ntBASIC-0.29□□□□□ -2.46
MSH4O15457 MIR4263-201ENST00000584745 83 ntBASIC-0.29□□□□□ -2.46
MSH4O15457 AL590491.3-201ENST00000610731 82 ntBASIC-0.29□□□□□ -2.46
MSH4O15457 RNU6-774P-201ENST00000363238 107 ntBASIC-0.3□□□□□ -2.46
MSH4O15457 SNORD114-28-201ENST00000363610 72 ntBASIC-0.3□□□□□ -2.46
MSH4O15457 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms