Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 RNU7-6P-201ENST00000516845 62 ntBASIC-2.31□□□□□ -2.78
HMGB3O15347 AC090617.8-201ENST00000623339 167 ntBASIC-2.31□□□□□ -2.78
HMGB3O15347 MIR335-201ENST00000362173 94 ntBASIC-2.32□□□□□ -2.78
HMGB3O15347 Y_RNA.19-201ENST00000362462 99 ntBASIC-2.32□□□□□ -2.78
HMGB3O15347 SNORD38.1-201ENST00000363863 68 ntBASIC-2.32□□□□□ -2.78
HMGB3O15347 Y_RNA.262-201ENST00000364641 102 ntBASIC-2.32□□□□□ -2.78
HMGB3O15347 RNU6-75P-201ENST00000515944 104 ntBASIC-2.32□□□□□ -2.78
HMGB3O15347 AC080013.6-201ENST00000606185 215 ntBASIC-2.32□□□□□ -2.78
HMGB3O15347 Y_RNA.145-201ENST00000363527 102 ntBASIC-2.33□□□□□ -2.78
HMGB3O15347 SNORD116-2-201ENST00000384274 95 ntBASIC-2.33□□□□□ -2.78
HMGB3O15347 Y_RNA.584-201ENST00000391090 114 ntBASIC-2.33□□□□□ -2.78
HMGB3O15347 Y_RNA.590-201ENST00000410140 107 ntBASIC-2.33□□□□□ -2.78
HMGB3O15347 RNU6-1052P-201ENST00000411398 104 ntBASIC-2.33□□□□□ -2.78
HMGB3O15347 Y_RNA.651-201ENST00000459380 103 ntBASIC-2.33□□□□□ -2.78
HMGB3O15347 RNU6-719P-201ENST00000516671 104 ntBASIC-2.33□□□□□ -2.78
HMGB3O15347 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-2.33□□□□□ -2.78
HMGB3O15347 RNU6-1313P-201ENST00000362622 102 ntBASIC-2.34□□□□□ -2.78
HMGB3O15347 Y_RNA.54-201ENST00000362766 105 ntBASIC-2.34□□□□□ -2.78
HMGB3O15347 RNU6-806P-201ENST00000365147 105 ntBASIC-2.34□□□□□ -2.78
HMGB3O15347 RNU6-880P-201ENST00000384526 107 ntBASIC-2.34□□□□□ -2.78
HMGB3O15347 RNA5SP26-201ENST00000362406 119 ntBASIC-2.35□□□□□ -2.79
HMGB3O15347 Y_RNA.276-201ENST00000364732 109 ntBASIC-2.35□□□□□ -2.79
HMGB3O15347 MIR548H3-201ENST00000408771 118 ntBASIC-2.35□□□□□ -2.79
HMGB3O15347 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.35□□□□□ -2.79
HMGB3O15347 AP000770.2-201ENST00000623694 100 ntBASIC-2.35□□□□□ -2.79
HMGB3O15347 MIR6874-201ENST00000635894 71 ntBASIC-2.35□□□□□ -2.79
HMGB3O15347 RNU6-990P-201ENST00000364385 104 ntBASIC-2.36□□□□□ -2.79
HMGB3O15347 RNU6-164P-201ENST00000364604 103 ntBASIC-2.36□□□□□ -2.79
HMGB3O15347 RNU6-450P-201ENST00000364654 107 ntBASIC-2.36□□□□□ -2.79
HMGB3O15347 RNU6-818P-201ENST00000364837 108 ntBASIC-2.36□□□□□ -2.79
HMGB3O15347 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-2.36□□□□□ -2.79
HMGB3O15347 SNORD19B-201ENST00000459623 84 ntBASIC-2.36□□□□□ -2.79
HMGB3O15347 FGF7P7-201ENST00000514120 227 ntBASIC-2.36□□□□□ -2.79
HMGB3O15347 Y_RNA.679-201ENST00000516416 91 ntBASIC-2.36□□□□□ -2.79
HMGB3O15347 AL137067.1-201ENST00000615933 120 ntBASIC-2.36□□□□□ -2.79
HMGB3O15347 Y_RNA.26-201ENST00000362539 101 ntBASIC-2.37□□□□□ -2.79
HMGB3O15347 RNU6-704P-201ENST00000364162 103 ntBASIC-2.37□□□□□ -2.79
HMGB3O15347 Y_RNA.441-201ENST00000384123 112 ntBASIC-2.37□□□□□ -2.79
HMGB3O15347 Y_RNA.632-201ENST00000459189 102 ntBASIC-2.37□□□□□ -2.79
HMGB3O15347 AC108081.1-201ENST00000604358 221 ntBASIC-2.37□□□□□ -2.79
HMGB3O15347 MIR1255B1-201ENST00000636325 63 ntBASIC-2.37□□□□□ -2.79
HMGB3O15347 AL512310.12-203ENST00000640543 90 ntBASIC-2.37□□□□□ -2.79
HMGB3O15347 MT-TL1-201ENST00000386347 75 ntBASIC-2.38□□□□□ -2.79
HMGB3O15347 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-2.38□□□□□ -2.79
HMGB3O15347 MIR1207-201ENST00000408249 87 ntBASIC-2.38□□□□□ -2.79
HMGB3O15347 RNU6-1143P-201ENST00000516125 104 ntBASIC-2.38□□□□□ -2.79
HMGB3O15347 RNU6-1234P-201ENST00000516877 103 ntBASIC-2.38□□□□□ -2.79
HMGB3O15347 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-2.38□□□□□ -2.79
HMGB3O15347 MIR1302-1-201ENST00000637932 143 ntBASIC-2.38□□□□□ -2.79
HMGB3O15347 Y_RNA.197-201ENST00000364004 102 ntBASIC-2.39□□□□□ -2.79
HMGB3O15347 RNU6-101P-201ENST00000410323 104 ntBASIC-2.39□□□□□ -2.79
HMGB3O15347 RNU6-1064P-201ENST00000410626 104 ntBASIC-2.39□□□□□ -2.79
HMGB3O15347 AC113618.1-201ENST00000416747 285 ntBASIC-2.39□□□□□ -2.79
HMGB3O15347 Y_RNA.698-201ENST00000516798 118 ntBASIC-2.39□□□□□ -2.79
HMGB3O15347 Y_RNA.721-201ENST00000517207 102 ntBASIC-2.39□□□□□ -2.79
HMGB3O15347 RNU6-119P-201ENST00000364882 107 ntBASIC-2.4□□□□□ -2.79
HMGB3O15347 Y_RNA.315-201ENST00000365117 102 ntBASIC-2.4□□□□□ -2.79
HMGB3O15347 RNU6-768P-201ENST00000384683 107 ntBASIC-2.4□□□□□ -2.79
HMGB3O15347 MT-TI-201ENST00000387365 69 ntBASIC-2.4□□□□□ -2.79
HMGB3O15347 MTND5P22-201ENST00000458380 195 ntBASIC-2.4□□□□□ -2.79
HMGB3O15347 RNU7-24P-201ENST00000458867 62 ntBASIC-2.4□□□□□ -2.79
HMGB3O15347 U2.14-201ENST00000615943 113 ntBASIC-2.4□□□□□ -2.79
HMGB3O15347 RNU6-228P-201ENST00000362700 106 ntBASIC-2.41□□□□□ -2.8
HMGB3O15347 RNU6-508P-201ENST00000363231 103 ntBASIC-2.41□□□□□ -2.8
HMGB3O15347 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.41□□□□□ -2.8
HMGB3O15347 SNORA7.5-201ENST00000410672 110 ntBASIC-2.41□□□□□ -2.8
HMGB3O15347 MIR3163-201ENST00000581592 73 ntBASIC-2.41□□□□□ -2.8
HMGB3O15347 MIR4723-201ENST00000585070 81 ntBASIC-2.41□□□□□ -2.8
HMGB3O15347 SNORD115-22-201ENST00000364456 82 ntBASIC-2.42□□□□□ -2.8
HMGB3O15347 RNU6-1018P-201ENST00000516577 106 ntBASIC-2.42□□□□□ -2.8
HMGB3O15347 MIR3149-201ENST00000584629 83 ntBASIC-2.42□□□□□ -2.8
HMGB3O15347 SNORA63.2-201ENST00000362603 126 ntBASIC-2.43□□□□□ -2.8
HMGB3O15347 RNU6-1233P-201ENST00000362922 102 ntBASIC-2.43□□□□□ -2.8
HMGB3O15347 MIR507-201ENST00000385234 94 ntBASIC-2.43□□□□□ -2.8
HMGB3O15347 RNU6-876P-201ENST00000391295 104 ntBASIC-2.43□□□□□ -2.8
HMGB3O15347 AL078595.1-201ENST00000404458 226 ntBASIC-2.43□□□□□ -2.8
HMGB3O15347 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.44□□□□□ -2.8
HMGB3O15347 RNU6-309P-201ENST00000364573 106 ntBASIC-2.44□□□□□ -2.8
HMGB3O15347 RNU6-275P-201ENST00000364910 107 ntBASIC-2.44□□□□□ -2.8
HMGB3O15347 Y_RNA.346-201ENST00000365385 112 ntBASIC-2.44□□□□□ -2.8
HMGB3O15347 RNU6-1215P-201ENST00000384441 102 ntBASIC-2.44□□□□□ -2.8
HMGB3O15347 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.44□□□□□ -2.8
HMGB3O15347 AL132765.2-201ENST00000610812 351 ntBASIC-2.44□□□□□ -2.8
HMGB3O15347 AC090971.5-201ENST00000621102 293 ntBASIC-2.44□□□□□ -2.8
HMGB3O15347 AC021753.1-201ENST00000635724 168 ntBASIC-2.44□□□□□ -2.8
HMGB3O15347 Y_RNA.70-201ENST00000362886 110 ntBASIC-2.45□□□□□ -2.8
HMGB3O15347 SNORD18B-201ENST00000365659 72 ntBASIC-2.45□□□□□ -2.8
HMGB3O15347 MIR548A1-201ENST00000385041 97 ntBASIC-2.45□□□□□ -2.8
HMGB3O15347 SNORD75.2-201ENST00000408784 58 ntBASIC-2.45□□□□□ -2.8
HMGB3O15347 AL353691.2-201ENST00000443795 59 ntBASIC-2.45□□□□□ -2.8
HMGB3O15347 FGF7P6-202ENST00000451282 293 ntBASIC-2.45□□□□□ -2.8
HMGB3O15347 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.45□□□□□ -2.8
HMGB3O15347 RNU6-65P-201ENST00000516332 98 ntBASIC-2.45□□□□□ -2.8
HMGB3O15347 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.45□□□□□ -2.8
HMGB3O15347 RNU6-312P-201ENST00000364629 107 ntBASIC-2.46□□□□□ -2.8
HMGB3O15347 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.46□□□□□ -2.8
HMGB3O15347 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.46□□□□□ -2.8
HMGB3O15347 SNORA75.5-201ENST00000391291 81 ntBASIC-2.46□□□□□ -2.8
HMGB3O15347 MIR1255B2-201ENST00000408618 67 ntBASIC-2.46□□□□□ -2.8
HMGB3O15347 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.46□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms