Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 Y_RNA.10-201ENST00000362371 110 ntBASIC0.06□□□□□ -2.4
ATP2A1O14983 MIR181B2-201ENST00000385004 89 ntBASIC0.06□□□□□ -2.4
ATP2A1O14983 MIR519E-201ENST00000385075 84 ntBASIC0.06□□□□□ -2.4
ATP2A1O14983 AL161932.1-201ENST00000437408 146 ntBASIC0.06□□□□□ -2.4
ATP2A1O14983 AC109327.2-201ENST00000448339 378 ntBASIC0.06□□□□□ -2.4
ATP2A1O14983 AL365222.1-201ENST00000614661 98 ntBASIC0.06□□□□□ -2.4
ATP2A1O14983 U6.100-201ENST00000636230 99 ntBASIC0.06□□□□□ -2.4
ATP2A1O14983 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.06□□□□□ -2.4
ATP2A1O14983 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.06□□□□□ -2.4
ATP2A1O14983 RNU6-957P-201ENST00000363652 99 ntBASIC0.05□□□□□ -2.4
ATP2A1O14983 RNU1-141P-201ENST00000364623 158 ntBASIC0.05□□□□□ -2.4
ATP2A1O14983 MIR643-201ENST00000385267 97 ntBASIC0.05□□□□□ -2.4
ATP2A1O14983 MIR892B-201ENST00000401279 77 ntBASIC0.05□□□□□ -2.4
ATP2A1O14983 MIR2113-201ENST00000459007 91 ntBASIC0.05□□□□□ -2.4
ATP2A1O14983 MIR3613-201ENST00000579844 87 ntBASIC0.05□□□□□ -2.4
ATP2A1O14983 MIR4743-201ENST00000584576 69 ntBASIC0.05□□□□□ -2.4
ATP2A1O14983 MIR4768-201ENST00000585270 74 ntBASIC0.05□□□□□ -2.4
ATP2A1O14983 MTRNR2L2-201ENST00000604882 87 ntBASIC0.05□□□□□ -2.4
ATP2A1O14983 RNU4-36P-201ENST00000364294 144 ntBASIC0.04□□□□□ -2.4
ATP2A1O14983 RNU6-1107P-201ENST00000364817 104 ntBASIC0.04□□□□□ -2.4
ATP2A1O14983 RNU6-1014P-201ENST00000383940 103 ntBASIC0.04□□□□□ -2.4
ATP2A1O14983 RNU6-1144P-201ENST00000384247 104 ntBASIC0.04□□□□□ -2.4
ATP2A1O14983 RNU6-1117P-201ENST00000384525 104 ntBASIC0.04□□□□□ -2.4
ATP2A1O14983 Y_RNA.660-201ENST00000516002 120 ntBASIC0.04□□□□□ -2.4
ATP2A1O14983 RNU6-287P-201ENST00000516230 98 ntBASIC0.04□□□□□ -2.4
ATP2A1O14983 RNU6-62P-201ENST00000516526 102 ntBASIC0.04□□□□□ -2.4
ATP2A1O14983 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.04□□□□□ -2.4
ATP2A1O14983 MIR3910-1-201ENST00000580936 111 ntBASIC0.04□□□□□ -2.4
ATP2A1O14983 AC132825.6-201ENST00000638861 357 ntBASIC0.04□□□□□ -2.4
ATP2A1O14983 Y_RNA.125-201ENST00000363371 111 ntBASIC0.03□□□□□ -2.4
ATP2A1O14983 RNU6-476P-201ENST00000384726 107 ntBASIC0.03□□□□□ -2.4
ATP2A1O14983 AL603908.1-201ENST00000406098 201 ntBASIC0.03□□□□□ -2.4
ATP2A1O14983 HMGN2P22-201ENST00000427588 175 ntBASIC0.03□□□□□ -2.4
ATP2A1O14983 AC093423.1-201ENST00000440817 142 ntBASIC0.03□□□□□ -2.4
ATP2A1O14983 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.03□□□□□ -2.4
ATP2A1O14983 Y_RNA.648-201ENST00000459455 110 ntBASIC0.03□□□□□ -2.4
ATP2A1O14983 RNU6-86P-201ENST00000606534 107 ntBASIC0.03□□□□□ -2.4
ATP2A1O14983 Y_RNA.95-201ENST00000363079 95 ntBASIC0.02□□□□□ -2.41
ATP2A1O14983 RNA5SP205-201ENST00000364653 136 ntBASIC0.02□□□□□ -2.41
ATP2A1O14983 Y_RNA.283-201ENST00000364798 112 ntBASIC0.02□□□□□ -2.41
ATP2A1O14983 SNORA51.5-201ENST00000384126 131 ntBASIC0.02□□□□□ -2.41
ATP2A1O14983 RNU6-22P-201ENST00000384355 107 ntBASIC0.02□□□□□ -2.41
ATP2A1O14983 RNU6-1168P-201ENST00000390831 104 ntBASIC0.02□□□□□ -2.41
ATP2A1O14983 RNU6-1064P-201ENST00000410626 104 ntBASIC0.02□□□□□ -2.41
ATP2A1O14983 MIR4677-201ENST00000584153 80 ntBASIC0.02□□□□□ -2.41
ATP2A1O14983 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.02□□□□□ -2.41
ATP2A1O14983 RNU6-834P-201ENST00000362367 110 ntBASIC0.01□□□□□ -2.41
ATP2A1O14983 Y_RNA.207-201ENST00000364142 106 ntBASIC0.01□□□□□ -2.41
ATP2A1O14983 Y_RNA.601-201ENST00000410500 113 ntBASIC0.01□□□□□ -2.41
ATP2A1O14983 snoU13.11-201ENST00000459219 104 ntBASIC0.01□□□□□ -2.41
ATP2A1O14983 SNORA25.13-201ENST00000516395 103 ntBASIC0.01□□□□□ -2.41
ATP2A1O14983 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.01□□□□□ -2.41
ATP2A1O14983 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
ATP2A1O14983 AC069503.3-201ENST00000618674 145 ntBASIC0.01□□□□□ -2.41
ATP2A1O14983 AC025521.1-201ENST00000621624 286 ntBASIC0.01□□□□□ -2.41
ATP2A1O14983 MIR371B-201ENST00000638082 66 ntBASIC0.01□□□□□ -2.41
ATP2A1O14983 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
ATP2A1O14983 SNORD101-201ENST00000384027 73 ntBASIC0□□□□□ -2.41
ATP2A1O14983 MIR548H2-201ENST00000408874 88 ntBASIC0□□□□□ -2.41
ATP2A1O14983 RNU6-479P-201ENST00000516348 105 ntBASIC0□□□□□ -2.41
ATP2A1O14983 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0□□□□□ -2.41
ATP2A1O14983 SNORD114-5-201ENST00000362928 70 ntBASIC-0.01□□□□□ -2.41
ATP2A1O14983 RNU6-161P-201ENST00000363051 106 ntBASIC-0.01□□□□□ -2.41
ATP2A1O14983 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.01□□□□□ -2.41
ATP2A1O14983 RNU6-664P-201ENST00000362381 107 ntBASIC-0.02□□□□□ -2.41
ATP2A1O14983 RNU6-813P-201ENST00000384691 107 ntBASIC-0.02□□□□□ -2.41
ATP2A1O14983 MIR593-201ENST00000384856 100 ntBASIC-0.02□□□□□ -2.41
ATP2A1O14983 MIR145-201ENST00000384967 88 ntBASIC-0.02□□□□□ -2.41
ATP2A1O14983 SNORA75.1-201ENST00000391130 148 ntBASIC-0.02□□□□□ -2.41
ATP2A1O14983 MIR4460-201ENST00000577862 86 ntBASIC-0.02□□□□□ -2.41
ATP2A1O14983 SNORD113-1-201ENST00000365321 69 ntBASIC-0.03□□□□□ -2.41
ATP2A1O14983 RNU6-904P-201ENST00000516206 101 ntBASIC-0.03□□□□□ -2.41
ATP2A1O14983 AL513043.2-201ENST00000573941 143 ntBASIC-0.03□□□□□ -2.41
ATP2A1O14983 MIR4696-201ENST00000581431 70 ntBASIC-0.03□□□□□ -2.41
ATP2A1O14983 MIR4290-201ENST00000583807 95 ntBASIC-0.03□□□□□ -2.41
ATP2A1O14983 MIR3925-201ENST00000584674 77 ntBASIC-0.03□□□□□ -2.41
ATP2A1O14983 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.04□□□□□ -2.42
ATP2A1O14983 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.04□□□□□ -2.42
ATP2A1O14983 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.04□□□□□ -2.42
ATP2A1O14983 MIR216B-201ENST00000390186 82 ntBASIC-0.04□□□□□ -2.42
ATP2A1O14983 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.04□□□□□ -2.42
ATP2A1O14983 RNU6-75P-201ENST00000515944 104 ntBASIC-0.04□□□□□ -2.42
ATP2A1O14983 RNU6-313P-201ENST00000516317 112 ntBASIC-0.04□□□□□ -2.42
ATP2A1O14983 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.04□□□□□ -2.42
ATP2A1O14983 MT-TY-201ENST00000387409 66 ntBASIC-0.05□□□□□ -2.42
ATP2A1O14983 RNU6-644P-201ENST00000391155 98 ntBASIC-0.05□□□□□ -2.42
ATP2A1O14983 MIR1302-5-201ENST00000408164 150 ntBASIC-0.05□□□□□ -2.42
ATP2A1O14983 RNU6-935P-201ENST00000410371 100 ntBASIC-0.05□□□□□ -2.42
ATP2A1O14983 SCARNA23-201ENST00000516060 130 ntBASIC-0.05□□□□□ -2.42
ATP2A1O14983 RNU6-65P-201ENST00000516332 98 ntBASIC-0.05□□□□□ -2.42
ATP2A1O14983 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.05□□□□□ -2.42
ATP2A1O14983 YWHAEP2-201ENST00000580066 112 ntBASIC-0.05□□□□□ -2.42
ATP2A1O14983 MIR4777-201ENST00000583710 86 ntBASIC-0.05□□□□□ -2.42
ATP2A1O14983 MIR6129-201ENST00000616087 109 ntBASIC-0.05□□□□□ -2.42
ATP2A1O14983 AC084368.1-201ENST00000620935 65 ntBASIC-0.05□□□□□ -2.42
ATP2A1O14983 MIR876-201ENST00000401147 81 ntBASIC-0.06□□□□□ -2.42
ATP2A1O14983 MIR4536-1-201ENST00000583537 88 ntBASIC-0.06□□□□□ -2.42
ATP2A1O14983 AC103810.7-201ENST00000607821 91 ntBASIC-0.06□□□□□ -2.42
ATP2A1O14983 MIR516B1-201ENST00000385211 90 ntBASIC-0.07□□□□□ -2.42
ATP2A1O14983 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 268.8 ms