Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 RNU6-480P-201ENST00000384332 107 ntBASIC0.36□□□□□ -2.35
CDX4O14627 SNORA8.2-201ENST00000384372 139 ntBASIC0.36□□□□□ -2.35
CDX4O14627 SNORD71-201ENST00000411292 86 ntBASIC0.36□□□□□ -2.35
CDX4O14627 RNU7-104P-201ENST00000459398 79 ntBASIC0.36□□□□□ -2.35
CDX4O14627 RNA5SP268-201ENST00000516828 124 ntBASIC0.36□□□□□ -2.35
CDX4O14627 SCARNA16.5-201ENST00000517114 183 ntBASIC0.36□□□□□ -2.35
CDX4O14627 RNU6-147P-201ENST00000383983 107 ntBASIC0.35□□□□□ -2.35
CDX4O14627 RNU6-813P-201ENST00000384691 107 ntBASIC0.35□□□□□ -2.35
CDX4O14627 RNU6-644P-201ENST00000391155 98 ntBASIC0.35□□□□□ -2.35
CDX4O14627 RNA5SP227-201ENST00000516184 113 ntBASIC0.35□□□□□ -2.35
CDX4O14627 AL513043.2-201ENST00000573941 143 ntBASIC0.35□□□□□ -2.35
CDX4O14627 MIR4439-201ENST00000583746 80 ntBASIC0.35□□□□□ -2.35
CDX4O14627 MIR7107-201ENST00000611489 80 ntBASIC0.35□□□□□ -2.35
CDX4O14627 MIR6828-201ENST00000636181 60 ntBASIC0.35□□□□□ -2.35
CDX4O14627 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.35□□□□□ -2.35
CDX4O14627 RNU6-957P-201ENST00000363652 99 ntBASIC0.34□□□□□ -2.36
CDX4O14627 SNORA40.8-201ENST00000411034 126 ntBASIC0.34□□□□□ -2.36
CDX4O14627 snoU13.11-201ENST00000459219 104 ntBASIC0.34□□□□□ -2.36
CDX4O14627 RNU7-61P-201ENST00000515897 61 ntBASIC0.34□□□□□ -2.36
CDX4O14627 MIR6718-201ENST00000616153 80 ntBASIC0.34□□□□□ -2.36
CDX4O14627 Y_RNA.107-201ENST00000363190 121 ntBASIC0.33□□□□□ -2.36
CDX4O14627 SNORD118-201ENST00000363593 134 ntBASIC0.33□□□□□ -2.36
CDX4O14627 RNU6-726P-201ENST00000364680 107 ntBASIC0.33□□□□□ -2.36
CDX4O14627 MIR548L-201ENST00000408303 86 ntBASIC0.33□□□□□ -2.36
CDX4O14627 AC069271.1-201ENST00000445577 156 ntBASIC0.33□□□□□ -2.36
CDX4O14627 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.33□□□□□ -2.36
CDX4O14627 Y_RNA.818-201ENST00000618813 71 ntBASIC0.33□□□□□ -2.36
CDX4O14627 TRDV1-202ENST00000621643 102 ntBASIC0.33□□□□□ -2.36
CDX4O14627 MIR6086-201ENST00000638065 55 ntBASIC0.33□□□□□ -2.36
CDX4O14627 AC090625.1-201ENST00000357130 210 ntBASIC0.32□□□□□ -2.36
CDX4O14627 Y_RNA.93-201ENST00000363066 109 ntBASIC0.32□□□□□ -2.36
CDX4O14627 MIR518A1-201ENST00000385068 85 ntBASIC0.32□□□□□ -2.36
CDX4O14627 RNU6-162P-201ENST00000516228 103 ntBASIC0.32□□□□□ -2.36
CDX4O14627 Y_RNA.705-201ENST00000516862 110 ntBASIC0.32□□□□□ -2.36
CDX4O14627 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.32□□□□□ -2.36
CDX4O14627 Y_RNA.495-201ENST00000384435 112 ntBASIC0.31□□□□□ -2.36
CDX4O14627 Y_RNA.544-201ENST00000384650 113 ntBASIC0.31□□□□□ -2.36
CDX4O14627 MTATP8P2-201ENST00000435212 202 ntBASIC0.31□□□□□ -2.36
CDX4O14627 SNORA68.3-201ENST00000515906 83 ntBASIC0.31□□□□□ -2.36
CDX4O14627 RNU6-1265P-201ENST00000516342 103 ntBASIC0.31□□□□□ -2.36
CDX4O14627 RNU7-13P-201ENST00000516413 62 ntBASIC0.31□□□□□ -2.36
CDX4O14627 MIR4752-201ENST00000579672 72 ntBASIC0.31□□□□□ -2.36
CDX4O14627 MIR3920-201ENST00000581751 86 ntBASIC0.31□□□□□ -2.36
CDX4O14627 AP001318.4-201ENST00000616637 121 ntBASIC0.31□□□□□ -2.36
CDX4O14627 U6.100-201ENST00000636230 99 ntBASIC0.31□□□□□ -2.36
CDX4O14627 Y_RNA.81-201ENST00000362997 102 ntBASIC0.3□□□□□ -2.36
CDX4O14627 Y_RNA.283-201ENST00000364798 112 ntBASIC0.3□□□□□ -2.36
CDX4O14627 SNORD58A-201ENST00000383875 65 ntBASIC0.3□□□□□ -2.36
CDX4O14627 RNU6-269P-201ENST00000391077 97 ntBASIC0.3□□□□□ -2.36
CDX4O14627 RNU6-972P-201ENST00000391208 107 ntBASIC0.3□□□□□ -2.36
CDX4O14627 RNU6-466P-201ENST00000391224 103 ntBASIC0.3□□□□□ -2.36
CDX4O14627 RNU6-887P-201ENST00000410660 100 ntBASIC0.3□□□□□ -2.36
CDX4O14627 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.3□□□□□ -2.36
CDX4O14627 Y_RNA.648-201ENST00000459455 110 ntBASIC0.3□□□□□ -2.36
CDX4O14627 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.3□□□□□ -2.36
CDX4O14627 U7.3-201ENST00000616123 62 ntBASIC0.3□□□□□ -2.36
CDX4O14627 MIR6759-201ENST00000638110 65 ntBASIC0.3□□□□□ -2.36
CDX4O14627 SNORD44.1-201ENST00000363202 61 ntBASIC0.29□□□□□ -2.36
CDX4O14627 Y_RNA.190-201ENST00000363964 101 ntBASIC0.29□□□□□ -2.36
CDX4O14627 RNU6-153P-201ENST00000364422 104 ntBASIC0.29□□□□□ -2.36
CDX4O14627 RNU6-32P-201ENST00000383948 107 ntBASIC0.29□□□□□ -2.36
CDX4O14627 RNU6-13P-201ENST00000384248 107 ntBASIC0.29□□□□□ -2.36
CDX4O14627 RNU6-12P-201ENST00000384604 107 ntBASIC0.29□□□□□ -2.36
CDX4O14627 RNU6-41P-201ENST00000384741 107 ntBASIC0.29□□□□□ -2.36
CDX4O14627 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.29□□□□□ -2.36
CDX4O14627 SNORD41.1-201ENST00000391000 69 ntBASIC0.29□□□□□ -2.36
CDX4O14627 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.29□□□□□ -2.36
CDX4O14627 RNU7-85P-201ENST00000458851 63 ntBASIC0.29□□□□□ -2.36
CDX4O14627 RNU6-863P-201ENST00000515989 104 ntBASIC0.29□□□□□ -2.36
CDX4O14627 MIR548AG2-201ENST00000581228 64 ntBASIC0.29□□□□□ -2.36
CDX4O14627 MIR103A1-201ENST00000362165 78 ntBASIC0.28□□□□□ -2.36
CDX4O14627 MIRLET7D-201ENST00000362263 87 ntBASIC0.28□□□□□ -2.36
CDX4O14627 Y_RNA.348-201ENST00000365403 103 ntBASIC0.28□□□□□ -2.36
CDX4O14627 MIR329-2-201ENST00000385029 84 ntBASIC0.28□□□□□ -2.36
CDX4O14627 Y_RNA.596-201ENST00000410462 109 ntBASIC0.28□□□□□ -2.36
CDX4O14627 RNU6-75P-201ENST00000515944 104 ntBASIC0.28□□□□□ -2.36
CDX4O14627 RNU6-287P-201ENST00000516230 98 ntBASIC0.28□□□□□ -2.36
CDX4O14627 SNORA40.13-201ENST00000516379 120 ntBASIC0.28□□□□□ -2.36
CDX4O14627 MIR4536-1-201ENST00000583537 88 ntBASIC0.28□□□□□ -2.36
CDX4O14627 Y_RNA.96-201ENST00000363092 109 ntBASIC0.27□□□□□ -2.37
CDX4O14627 Y_RNA.207-201ENST00000364142 106 ntBASIC0.27□□□□□ -2.37
CDX4O14627 Y_RNA.290-201ENST00000364879 114 ntBASIC0.27□□□□□ -2.37
CDX4O14627 RNU6-1126P-201ENST00000384002 107 ntBASIC0.27□□□□□ -2.37
CDX4O14627 Y_RNA.423-201ENST00000384057 113 ntBASIC0.27□□□□□ -2.37
CDX4O14627 RNU2-59P-201ENST00000410482 191 ntBASIC0.27□□□□□ -2.37
CDX4O14627 RNU6-65P-201ENST00000516332 98 ntBASIC0.27□□□□□ -2.37
CDX4O14627 MIR4696-201ENST00000581431 70 ntBASIC0.27□□□□□ -2.37
CDX4O14627 AL162376.1-201ENST00000624117 175 ntBASIC0.27□□□□□ -2.37
CDX4O14627 MIRLET7F1-201ENST00000362202 87 ntBASIC0.26□□□□□ -2.37
CDX4O14627 RNU6-664P-201ENST00000362381 107 ntBASIC0.26□□□□□ -2.37
CDX4O14627 RNU6-640P-201ENST00000363693 105 ntBASIC0.26□□□□□ -2.37
CDX4O14627 RNU6-1327P-201ENST00000365302 105 ntBASIC0.26□□□□□ -2.37
CDX4O14627 SNORD101-201ENST00000384027 73 ntBASIC0.26□□□□□ -2.37
CDX4O14627 RNU6-905P-201ENST00000384434 107 ntBASIC0.26□□□□□ -2.37
CDX4O14627 RNA5SP299-201ENST00000391203 116 ntBASIC0.26□□□□□ -2.37
CDX4O14627 RNA5SP89-201ENST00000410300 108 ntBASIC0.26□□□□□ -2.37
CDX4O14627 RNU6-519P-201ENST00000410590 108 ntBASIC0.26□□□□□ -2.37
CDX4O14627 MIR2113-201ENST00000459007 91 ntBASIC0.26□□□□□ -2.37
CDX4O14627 SNORD4B-201ENST00000459083 72 ntBASIC0.26□□□□□ -2.37
CDX4O14627 RNU6-168P-201ENST00000516189 101 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms