Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RNU6-480P-201ENST00000384332 107 ntBASIC-0.03□□□□□ -2.41
O00370 RNU6-35P-201ENST00000384530 107 ntBASIC-0.03□□□□□ -2.41
O00370 MIR519E-201ENST00000385075 84 ntBASIC-0.03□□□□□ -2.41
O00370 RNA5SP163-201ENST00000410304 99 ntBASIC-0.03□□□□□ -2.41
O00370 snoU13.11-201ENST00000459219 104 ntBASIC-0.03□□□□□ -2.41
O00370 RNU6-287P-201ENST00000516230 98 ntBASIC-0.03□□□□□ -2.41
O00370 RNA5SP395-201ENST00000516567 118 ntBASIC-0.03□□□□□ -2.41
O00370 AC141557.1-201ENST00000540982 400 ntBASIC-0.03□□□□□ -2.41
O00370 MIR4679-2-201ENST00000578358 77 ntBASIC-0.03□□□□□ -2.41
O00370 RNU6-86P-201ENST00000606534 107 ntBASIC-0.03□□□□□ -2.41
O00370 RNY3P2-201ENST00000362918 102 ntBASIC-0.04□□□□□ -2.42
O00370 RNU1-141P-201ENST00000364623 158 ntBASIC-0.04□□□□□ -2.42
O00370 SNORD50.2-201ENST00000365465 70 ntBASIC-0.04□□□□□ -2.42
O00370 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.04□□□□□ -2.42
O00370 MIR617-201ENST00000385030 97 ntBASIC-0.04□□□□□ -2.42
O00370 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.04□□□□□ -2.42
O00370 HMGN2P22-201ENST00000427588 175 ntBASIC-0.04□□□□□ -2.42
O00370 RNU6-782P-201ENST00000516852 104 ntBASIC-0.04□□□□□ -2.42
O00370 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.04□□□□□ -2.42
O00370 MIR4460-201ENST00000577862 86 ntBASIC-0.04□□□□□ -2.42
O00370 MIR5009-201ENST00000578736 100 ntBASIC-0.04□□□□□ -2.42
O00370 MIR548AD-201ENST00000584780 82 ntBASIC-0.04□□□□□ -2.42
O00370 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.04□□□□□ -2.42
O00370 AC084368.1-201ENST00000620935 65 ntBASIC-0.04□□□□□ -2.42
O00370 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.05□□□□□ -2.42
O00370 MIR516B1-201ENST00000385211 90 ntBASIC-0.05□□□□□ -2.42
O00370 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.05□□□□□ -2.42
O00370 YWHAEP2-201ENST00000580066 112 ntBASIC-0.05□□□□□ -2.42
O00370 AC025521.1-201ENST00000621624 286 ntBASIC-0.05□□□□□ -2.42
O00370 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.06□□□□□ -2.42
O00370 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.06□□□□□ -2.42
O00370 RNU6-929P-201ENST00000384429 107 ntBASIC-0.06□□□□□ -2.42
O00370 SNORD116-21-201ENST00000384507 92 ntBASIC-0.06□□□□□ -2.42
O00370 RNU6-880P-201ENST00000384526 107 ntBASIC-0.06□□□□□ -2.42
O00370 MIR106A-201ENST00000384870 81 ntBASIC-0.06□□□□□ -2.42
O00370 MIR892B-201ENST00000401279 77 ntBASIC-0.06□□□□□ -2.42
O00370 RNU7-159P-201ENST00000459284 62 ntBASIC-0.06□□□□□ -2.42
O00370 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.06□□□□□ -2.42
O00370 MIR371B-201ENST00000638082 66 ntBASIC-0.06□□□□□ -2.42
O00370 SNORD101-201ENST00000384027 73 ntBASIC-0.07□□□□□ -2.42
O00370 SNORA25.13-201ENST00000516395 103 ntBASIC-0.07□□□□□ -2.42
O00370 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.07□□□□□ -2.42
O00370 MIR6514-201ENST00000622549 70 ntBASIC-0.07□□□□□ -2.42
O00370 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.08□□□□□ -2.42
O00370 SNORD45B-201ENST00000364617 72 ntBASIC-0.08□□□□□ -2.42
O00370 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.08□□□□□ -2.42
O00370 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
O00370 SNORA75.1-201ENST00000391130 148 ntBASIC-0.08□□□□□ -2.42
O00370 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.08□□□□□ -2.42
O00370 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.08□□□□□ -2.42
O00370 MIR3613-201ENST00000579844 87 ntBASIC-0.08□□□□□ -2.42
O00370 MIR3925-201ENST00000584674 77 ntBASIC-0.08□□□□□ -2.42
O00370 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.09□□□□□ -2.42
O00370 RNU6-959P-201ENST00000384671 107 ntBASIC-0.09□□□□□ -2.42
O00370 MIR548H2-201ENST00000408874 88 ntBASIC-0.09□□□□□ -2.42
O00370 AC008267.6-201ENST00000441664 139 ntBASIC-0.09□□□□□ -2.42
O00370 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.09□□□□□ -2.42
O00370 MIR4802-201ENST00000581881 80 ntBASIC-0.09□□□□□ -2.42
O00370 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.09□□□□□ -2.42
O00370 RNU4-36P-201ENST00000364294 144 ntBASIC-0.1□□□□□ -2.43
O00370 RNU6-412P-201ENST00000516434 106 ntBASIC-0.1□□□□□ -2.43
O00370 RNA5SP476-201ENST00000516613 103 ntBASIC-0.1□□□□□ -2.43
O00370 MIR4636-201ENST00000582271 80 ntBASIC-0.1□□□□□ -2.43
O00370 AL365222.1-201ENST00000614661 98 ntBASIC-0.1□□□□□ -2.43
O00370 AC069503.3-201ENST00000618674 145 ntBASIC-0.1□□□□□ -2.43
O00370 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.11□□□□□ -2.43
O00370 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.11□□□□□ -2.43
O00370 RNU6-795P-201ENST00000516323 103 ntBASIC-0.11□□□□□ -2.43
O00370 RNU6-65P-201ENST00000516332 98 ntBASIC-0.11□□□□□ -2.43
O00370 RNU6-664P-201ENST00000362381 107 ntBASIC-0.12□□□□□ -2.43
O00370 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.12□□□□□ -2.43
O00370 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.12□□□□□ -2.43
O00370 AL513043.2-201ENST00000573941 143 ntBASIC-0.12□□□□□ -2.43
O00370 MIR4290-201ENST00000583807 95 ntBASIC-0.12□□□□□ -2.43
O00370 AC103810.7-201ENST00000607821 91 ntBASIC-0.12□□□□□ -2.43
O00370 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.13□□□□□ -2.43
O00370 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.13□□□□□ -2.43
O00370 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.13□□□□□ -2.43
O00370 RNU6V-201ENST00000384105 107 ntBASIC-0.13□□□□□ -2.43
O00370 SNORA19.1-201ENST00000410656 129 ntBASIC-0.13□□□□□ -2.43
O00370 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.13□□□□□ -2.43
O00370 RNU7-188P-201ENST00000517063 64 ntBASIC-0.13□□□□□ -2.43
O00370 MIR5589-201ENST00000579442 60 ntBASIC-0.13□□□□□ -2.43
O00370 MIR4696-201ENST00000581431 70 ntBASIC-0.13□□□□□ -2.43
O00370 MIR4536-1-201ENST00000583537 88 ntBASIC-0.13□□□□□ -2.43
O00370 MIR548Z-201ENST00000584743 97 ntBASIC-0.13□□□□□ -2.43
O00370 uc_338.10-201ENST00000621872 182 ntBASIC-0.13□□□□□ -2.43
O00370 AC093423.1-201ENST00000440817 142 ntBASIC-0.14□□□□□ -2.43
O00370 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.14□□□□□ -2.43
O00370 MIR548AE1-201ENST00000583292 70 ntBASIC-0.14□□□□□ -2.43
O00370 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.14□□□□□ -2.43
O00370 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.15□□□□□ -2.43
O00370 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.15□□□□□ -2.43
O00370 RNU6-154P-201ENST00000384306 106 ntBASIC-0.15□□□□□ -2.43
O00370 RNU6-476P-201ENST00000384726 107 ntBASIC-0.15□□□□□ -2.43
O00370 MIR451A-201ENST00000385059 72 ntBASIC-0.15□□□□□ -2.43
O00370 RNU6-935P-201ENST00000410371 100 ntBASIC-0.15□□□□□ -2.43
O00370 MIR4743-201ENST00000584576 69 ntBASIC-0.15□□□□□ -2.43
O00370 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.16□□□□□ -2.43
O00370 RNU6-756P-201ENST00000383997 107 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms