Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 MIR329-2-201ENST00000385029 84 ntBASIC0.87□□□□□ -2.27
CCDC85CA6NKD9 RNU6-887P-201ENST00000410660 100 ntBASIC0.87□□□□□ -2.27
CCDC85CA6NKD9 RNU7-161P-201ENST00000517289 62 ntBASIC0.87□□□□□ -2.27
CCDC85CA6NKD9 AC103810.7-201ENST00000607821 91 ntBASIC0.87□□□□□ -2.27
CCDC85CA6NKD9 AC244669.1-204ENST00000621564 178 ntBASIC0.87□□□□□ -2.27
CCDC85CA6NKD9 SNORA36.1-201ENST00000363424 132 ntBASIC0.86□□□□□ -2.27
CCDC85CA6NKD9 Y_RNA.648-201ENST00000459455 110 ntBASIC0.86□□□□□ -2.27
CCDC85CA6NKD9 AL513043.2-201ENST00000573941 143 ntBASIC0.86□□□□□ -2.27
CCDC85CA6NKD9 AC025521.1-201ENST00000621624 286 ntBASIC0.86□□□□□ -2.27
CCDC85CA6NKD9 MIR6866-201ENST00000638146 69 ntBASIC0.86□□□□□ -2.27
CCDC85CA6NKD9 Y_RNA.348-201ENST00000365403 103 ntBASIC0.85□□□□□ -2.27
CCDC85CA6NKD9 SNORA40.13-201ENST00000516379 120 ntBASIC0.85□□□□□ -2.27
CCDC85CA6NKD9 RNU6-229P-201ENST00000516614 102 ntBASIC0.85□□□□□ -2.27
CCDC85CA6NKD9 RNU6-524P-201ENST00000384270 107 ntBASIC0.84□□□□□ -2.27
CCDC85CA6NKD9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.84□□□□□ -2.27
CCDC85CA6NKD9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
CCDC85CA6NKD9 SNORD58A-201ENST00000383875 65 ntBASIC0.83□□□□□ -2.28
CCDC85CA6NKD9 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.83□□□□□ -2.28
CCDC85CA6NKD9 SNORA8.2-201ENST00000384372 139 ntBASIC0.82□□□□□ -2.28
CCDC85CA6NKD9 RNU7-61P-201ENST00000515897 61 ntBASIC0.82□□□□□ -2.28
CCDC85CA6NKD9 AC018659.1-201ENST00000551083 169 ntBASIC0.82□□□□□ -2.28
CCDC85CA6NKD9 AC092634.7-201ENST00000621022 103 ntBASIC0.82□□□□□ -2.28
CCDC85CA6NKD9 SNORD116-10-201ENST00000363791 102 ntBASIC0.81□□□□□ -2.28
CCDC85CA6NKD9 Y_RNA.221-201ENST00000364248 96 ntBASIC0.81□□□□□ -2.28
CCDC85CA6NKD9 RNA5SP517-201ENST00000364724 117 ntBASIC0.81□□□□□ -2.28
CCDC85CA6NKD9 SNORD41.1-201ENST00000391000 69 ntBASIC0.81□□□□□ -2.28
CCDC85CA6NKD9 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.81□□□□□ -2.28
CCDC85CA6NKD9 RNU6-168P-201ENST00000516189 101 ntBASIC0.81□□□□□ -2.28
CCDC85CA6NKD9 RN7SKP12-201ENST00000516275 143 ntBASIC0.81□□□□□ -2.28
CCDC85CA6NKD9 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.81□□□□□ -2.28
CCDC85CA6NKD9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
CCDC85CA6NKD9 RNU6-640P-201ENST00000363693 105 ntBASIC0.8□□□□□ -2.28
CCDC85CA6NKD9 RNU6-726P-201ENST00000364680 107 ntBASIC0.8□□□□□ -2.28
CCDC85CA6NKD9 RNU6-466P-201ENST00000391224 103 ntBASIC0.8□□□□□ -2.28
CCDC85CA6NKD9 RNA5SP268-201ENST00000516828 124 ntBASIC0.8□□□□□ -2.28
CCDC85CA6NKD9 MTRNR2L2-201ENST00000604882 87 ntBASIC0.8□□□□□ -2.28
CCDC85CA6NKD9 TRDV1-202ENST00000621643 102 ntBASIC0.8□□□□□ -2.28
CCDC85CA6NKD9 AC067863.3-201ENST00000624172 122 ntBASIC0.8□□□□□ -2.28
CCDC85CA6NKD9 Y_RNA.283-201ENST00000364798 112 ntBASIC0.79□□□□□ -2.28
CCDC85CA6NKD9 SNORD115-44-201ENST00000365391 82 ntBASIC0.79□□□□□ -2.28
CCDC85CA6NKD9 SNORA2A-201ENST00000383885 135 ntBASIC0.79□□□□□ -2.28
CCDC85CA6NKD9 RNU6-905P-201ENST00000384434 107 ntBASIC0.79□□□□□ -2.28
CCDC85CA6NKD9 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
CCDC85CA6NKD9 snoU13.11-201ENST00000459219 104 ntBASIC0.78□□□□□ -2.28
CCDC85CA6NKD9 Y_RNA.677-201ENST00000516401 85 ntBASIC0.78□□□□□ -2.28
CCDC85CA6NKD9 SNORD118-201ENST00000363593 134 ntBASIC0.77□□□□□ -2.29
CCDC85CA6NKD9 RNU6-957P-201ENST00000363652 99 ntBASIC0.77□□□□□ -2.29
CCDC85CA6NKD9 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
CCDC85CA6NKD9 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.77□□□□□ -2.29
CCDC85CA6NKD9 RNA5SP89-201ENST00000410300 108 ntBASIC0.77□□□□□ -2.29
CCDC85CA6NKD9 SNORA40.8-201ENST00000411034 126 ntBASIC0.77□□□□□ -2.29
CCDC85CA6NKD9 AL606490.4-201ENST00000423117 127 ntBASIC0.77□□□□□ -2.29
CCDC85CA6NKD9 RNU7-104P-201ENST00000459398 79 ntBASIC0.77□□□□□ -2.29
CCDC85CA6NKD9 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.77□□□□□ -2.29
CCDC85CA6NKD9 AC243829.6-201ENST00000612652 106 ntBASIC0.77□□□□□ -2.29
CCDC85CA6NKD9 U7.3-201ENST00000616123 62 ntBASIC0.77□□□□□ -2.29
CCDC85CA6NKD9 RNU6-945P-201ENST00000383947 107 ntBASIC0.76□□□□□ -2.29
CCDC85CA6NKD9 RNA5SP25-201ENST00000410815 110 ntBASIC0.76□□□□□ -2.29
CCDC85CA6NKD9 RNA5SP227-201ENST00000516184 113 ntBASIC0.76□□□□□ -2.29
CCDC85CA6NKD9 RNU7-13P-201ENST00000516413 62 ntBASIC0.76□□□□□ -2.29
CCDC85CA6NKD9 MIR3920-201ENST00000581751 86 ntBASIC0.76□□□□□ -2.29
CCDC85CA6NKD9 MIR7107-201ENST00000611489 80 ntBASIC0.76□□□□□ -2.29
CCDC85CA6NKD9 RNA5SP499-201ENST00000363982 119 ntBASIC0.75□□□□□ -2.29
CCDC85CA6NKD9 RNU6-1126P-201ENST00000384002 107 ntBASIC0.75□□□□□ -2.29
CCDC85CA6NKD9 MIR518A1-201ENST00000385068 85 ntBASIC0.75□□□□□ -2.29
CCDC85CA6NKD9 RNU6-75P-201ENST00000515944 104 ntBASIC0.75□□□□□ -2.29
CCDC85CA6NKD9 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
CCDC85CA6NKD9 Y_RNA.290-201ENST00000364879 114 ntBASIC0.74□□□□□ -2.29
CCDC85CA6NKD9 RNU7-85P-201ENST00000458851 63 ntBASIC0.74□□□□□ -2.29
CCDC85CA6NKD9 AL162376.1-201ENST00000624117 175 ntBASIC0.74□□□□□ -2.29
CCDC85CA6NKD9 MIR409-201ENST00000362237 79 ntBASIC0.73□□□□□ -2.29
CCDC85CA6NKD9 Y_RNA.596-201ENST00000410462 109 ntBASIC0.73□□□□□ -2.29
CCDC85CA6NKD9 SNORD71-201ENST00000411292 86 ntBASIC0.73□□□□□ -2.29
CCDC85CA6NKD9 MALAT1.1-201ENST00000618249 95 ntBASIC0.73□□□□□ -2.29
CCDC85CA6NKD9 AL161932.1-201ENST00000437408 146 ntBASIC0.72□□□□□ -2.29
CCDC85CA6NKD9 RNU4-54P-201ENST00000516428 129 ntBASIC0.72□□□□□ -2.29
CCDC85CA6NKD9 AC023932.2-201ENST00000603176 175 ntBASIC0.72□□□□□ -2.29
CCDC85CA6NKD9 U6.100-201ENST00000636230 99 ntBASIC0.72□□□□□ -2.29
CCDC85CA6NKD9 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
CCDC85CA6NKD9 SNORD4B-201ENST00000459083 72 ntBASIC0.71□□□□□ -2.3
CCDC85CA6NKD9 RNU7-74P-201ENST00000459104 62 ntBASIC0.7□□□□□ -2.3
CCDC85CA6NKD9 RNU6-863P-201ENST00000515989 104 ntBASIC0.7□□□□□ -2.3
CCDC85CA6NKD9 Z95118.1-201ENST00000421372 247 ntBASIC0.69□□□□□ -2.3
CCDC85CA6NKD9 RNU6-65P-201ENST00000516332 98 ntBASIC0.69□□□□□ -2.3
CCDC85CA6NKD9 MIR4536-1-201ENST00000583537 88 ntBASIC0.69□□□□□ -2.3
CCDC85CA6NKD9 SNORA25.18-201ENST00000607153 114 ntBASIC0.69□□□□□ -2.3
CCDC85CA6NKD9 MIR617-201ENST00000385030 97 ntBASIC0.68□□□□□ -2.3
CCDC85CA6NKD9 MIR548L-201ENST00000408303 86 ntBASIC0.68□□□□□ -2.3
CCDC85CA6NKD9 RNU6-519P-201ENST00000410590 108 ntBASIC0.68□□□□□ -2.3
CCDC85CA6NKD9 RNU6-848P-201ENST00000515948 107 ntBASIC0.68□□□□□ -2.3
CCDC85CA6NKD9 RNU6-617P-201ENST00000516147 107 ntBASIC0.68□□□□□ -2.3
CCDC85CA6NKD9 RNU6-473P-201ENST00000516164 107 ntBASIC0.68□□□□□ -2.3
CCDC85CA6NKD9 RNU6-162P-201ENST00000516228 103 ntBASIC0.68□□□□□ -2.3
CCDC85CA6NKD9 RNU6-1049P-201ENST00000516414 107 ntBASIC0.68□□□□□ -2.3
CCDC85CA6NKD9 IGLVI-20-201ENST00000519296 130 ntBASIC0.68□□□□□ -2.3
CCDC85CA6NKD9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.68□□□□□ -2.3
CCDC85CA6NKD9 RNU6-664P-201ENST00000362381 107 ntBASIC0.67□□□□□ -2.3
CCDC85CA6NKD9 RNA5SP368-201ENST00000364298 116 ntBASIC0.67□□□□□ -2.3
CCDC85CA6NKD9 MIR488-201ENST00000365739 83 ntBASIC0.67□□□□□ -2.3
CCDC85CA6NKD9 SNORD101-201ENST00000384027 73 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 228.8 ms