Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 MIR655-201ENST00000362159 97 ntBASIC-0.38□□□□□ -2.47
SMIM28A0A1B0GU29 RNU6-811P-201ENST00000384069 107 ntBASIC-0.38□□□□□ -2.47
SMIM28A0A1B0GU29 RNU6-154P-201ENST00000384306 106 ntBASIC-0.38□□□□□ -2.47
SMIM28A0A1B0GU29 RNU6-257P-201ENST00000410238 98 ntBASIC-0.38□□□□□ -2.47
SMIM28A0A1B0GU29 uc_338.10-201ENST00000621872 182 ntBASIC-0.38□□□□□ -2.47
SMIM28A0A1B0GU29 RNA5SP205-201ENST00000364653 136 ntBASIC-0.39□□□□□ -2.47
SMIM28A0A1B0GU29 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.39□□□□□ -2.47
SMIM28A0A1B0GU29 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.39□□□□□ -2.47
SMIM28A0A1B0GU29 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.39□□□□□ -2.47
SMIM28A0A1B0GU29 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.39□□□□□ -2.47
SMIM28A0A1B0GU29 MIR577-201ENST00000385196 96 ntBASIC-0.39□□□□□ -2.47
SMIM28A0A1B0GU29 RNU6-466P-201ENST00000391224 103 ntBASIC-0.39□□□□□ -2.47
SMIM28A0A1B0GU29 RNU6-255P-201ENST00000516957 105 ntBASIC-0.39□□□□□ -2.47
SMIM28A0A1B0GU29 AC007012.1-201ENST00000567192 175 ntBASIC-0.39□□□□□ -2.47
SMIM28A0A1B0GU29 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.39□□□□□ -2.47
SMIM28A0A1B0GU29 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.4□□□□□ -2.47
SMIM28A0A1B0GU29 SNORD101-201ENST00000384027 73 ntBASIC-0.4□□□□□ -2.47
SMIM28A0A1B0GU29 RNU7-107P-201ENST00000459121 61 ntBASIC-0.4□□□□□ -2.47
SMIM28A0A1B0GU29 RNU6-346P-201ENST00000516288 111 ntBASIC-0.4□□□□□ -2.47
SMIM28A0A1B0GU29 RNU6-320P-201ENST00000516511 106 ntBASIC-0.4□□□□□ -2.47
SMIM28A0A1B0GU29 MIR4696-201ENST00000581431 70 ntBASIC-0.4□□□□□ -2.47
SMIM28A0A1B0GU29 MIR3666-201ENST00000607845 111 ntBASIC-0.4□□□□□ -2.47
SMIM28A0A1B0GU29 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.41□□□□□ -2.48
SMIM28A0A1B0GU29 MIR1912-201ENST00000410389 80 ntBASIC-0.41□□□□□ -2.48
SMIM28A0A1B0GU29 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.41□□□□□ -2.48
SMIM28A0A1B0GU29 RNU6-664P-201ENST00000362381 107 ntBASIC-0.42□□□□□ -2.48
SMIM28A0A1B0GU29 SNORD114-29-201ENST00000364819 70 ntBASIC-0.42□□□□□ -2.48
SMIM28A0A1B0GU29 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.42□□□□□ -2.48
SMIM28A0A1B0GU29 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.42□□□□□ -2.48
SMIM28A0A1B0GU29 SNORA40-201ENST00000388090 126 ntBASIC-0.42□□□□□ -2.48
SMIM28A0A1B0GU29 RNA5SP300-201ENST00000391197 107 ntBASIC-0.42□□□□□ -2.48
SMIM28A0A1B0GU29 RNU6-75P-201ENST00000515944 104 ntBASIC-0.42□□□□□ -2.48
SMIM28A0A1B0GU29 AC025521.1-201ENST00000621624 286 ntBASIC-0.42□□□□□ -2.48
SMIM28A0A1B0GU29 AL157777.2-201ENST00000258070 137 ntBASIC-0.43□□□□□ -2.48
SMIM28A0A1B0GU29 RNA5SP98-201ENST00000363158 137 ntBASIC-0.43□□□□□ -2.48
SMIM28A0A1B0GU29 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.43□□□□□ -2.48
SMIM28A0A1B0GU29 MIR4694-201ENST00000578534 80 ntBASIC-0.43□□□□□ -2.48
SMIM28A0A1B0GU29 MIR3613-201ENST00000579844 87 ntBASIC-0.43□□□□□ -2.48
SMIM28A0A1B0GU29 RNA5SP275-201ENST00000363936 118 ntBASIC-0.44□□□□□ -2.48
SMIM28A0A1B0GU29 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.44□□□□□ -2.48
SMIM28A0A1B0GU29 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.44□□□□□ -2.48
SMIM28A0A1B0GU29 MIR652-201ENST00000385278 98 ntBASIC-0.44□□□□□ -2.48
SMIM28A0A1B0GU29 RNU6-935P-201ENST00000410371 100 ntBASIC-0.44□□□□□ -2.48
SMIM28A0A1B0GU29 RNU6-971P-201ENST00000516920 106 ntBASIC-0.44□□□□□ -2.48
SMIM28A0A1B0GU29 IGLVI-20-201ENST00000519296 130 ntBASIC-0.44□□□□□ -2.48
SMIM28A0A1B0GU29 MIR548O2-201ENST00000616090 70 ntBASIC-0.44□□□□□ -2.48
SMIM28A0A1B0GU29 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.45□□□□□ -2.48
SMIM28A0A1B0GU29 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.45□□□□□ -2.48
SMIM28A0A1B0GU29 AC096531.1-201ENST00000419107 107 ntBASIC-0.45□□□□□ -2.48
SMIM28A0A1B0GU29 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.45□□□□□ -2.48
SMIM28A0A1B0GU29 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.45□□□□□ -2.48
SMIM28A0A1B0GU29 AL590491.3-201ENST00000610731 82 ntBASIC-0.45□□□□□ -2.48
SMIM28A0A1B0GU29 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.46□□□□□ -2.48
SMIM28A0A1B0GU29 RNU6-832P-201ENST00000363319 107 ntBASIC-0.46□□□□□ -2.48
SMIM28A0A1B0GU29 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.46□□□□□ -2.48
SMIM28A0A1B0GU29 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.46□□□□□ -2.48
SMIM28A0A1B0GU29 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.46□□□□□ -2.48
SMIM28A0A1B0GU29 RNU6-480P-201ENST00000384332 107 ntBASIC-0.46□□□□□ -2.48
SMIM28A0A1B0GU29 SNORD33.1-201ENST00000516213 88 ntBASIC-0.46□□□□□ -2.48
SMIM28A0A1B0GU29 MIR4679-2-201ENST00000578358 77 ntBASIC-0.46□□□□□ -2.48
SMIM28A0A1B0GU29 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.46□□□□□ -2.48
SMIM28A0A1B0GU29 MIR4788-201ENST00000639104 80 ntBASIC-0.46□□□□□ -2.48
SMIM28A0A1B0GU29 RNY3P2-201ENST00000362918 102 ntBASIC-0.47□□□□□ -2.48
SMIM28A0A1B0GU29 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.47□□□□□ -2.48
SMIM28A0A1B0GU29 RNU6-54P-201ENST00000365563 107 ntBASIC-0.47□□□□□ -2.48
SMIM28A0A1B0GU29 RNY1P5-201ENST00000383890 115 ntBASIC-0.47□□□□□ -2.48
SMIM28A0A1B0GU29 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.47□□□□□ -2.48
SMIM28A0A1B0GU29 MIR451A-201ENST00000385059 72 ntBASIC-0.47□□□□□ -2.48
SMIM28A0A1B0GU29 SNORA49-201ENST00000386157 136 ntBASIC-0.47□□□□□ -2.48
SMIM28A0A1B0GU29 AC096720.1-201ENST00000604441 183 ntBASIC-0.47□□□□□ -2.48
SMIM28A0A1B0GU29 RNU6-86P-201ENST00000606534 107 ntBASIC-0.47□□□□□ -2.48
SMIM28A0A1B0GU29 MIR3914-2-201ENST00000637339 95 ntBASIC-0.47□□□□□ -2.48
SMIM28A0A1B0GU29 SNORD114-11-201ENST00000363738 75 ntBASIC-0.48□□□□□ -2.49
SMIM28A0A1B0GU29 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.48□□□□□ -2.49
SMIM28A0A1B0GU29 RNU7-85P-201ENST00000458851 63 ntBASIC-0.48□□□□□ -2.49
SMIM28A0A1B0GU29 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.48□□□□□ -2.49
SMIM28A0A1B0GU29 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.48□□□□□ -2.49
SMIM28A0A1B0GU29 AC068339.1-201ENST00000526965 141 ntBASIC-0.48□□□□□ -2.49
SMIM28A0A1B0GU29 MIR4802-201ENST00000581881 80 ntBASIC-0.48□□□□□ -2.49
SMIM28A0A1B0GU29 SNORD114-31-201ENST00000363219 75 ntBASIC-0.49□□□□□ -2.49
SMIM28A0A1B0GU29 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.49□□□□□ -2.49
SMIM28A0A1B0GU29 RNU6-455P-201ENST00000384681 107 ntBASIC-0.49□□□□□ -2.49
SMIM28A0A1B0GU29 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.49□□□□□ -2.49
SMIM28A0A1B0GU29 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.49□□□□□ -2.49
SMIM28A0A1B0GU29 RNU6-794P-201ENST00000517261 64 ntBASIC-0.49□□□□□ -2.49
SMIM28A0A1B0GU29 AL513043.2-201ENST00000573941 143 ntBASIC-0.49□□□□□ -2.49
SMIM28A0A1B0GU29 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.5□□□□□ -2.49
SMIM28A0A1B0GU29 MIR20A-201ENST00000362279 71 ntBASIC-0.5□□□□□ -2.49
SMIM28A0A1B0GU29 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.5□□□□□ -2.49
SMIM28A0A1B0GU29 SNORD50.2-201ENST00000365465 70 ntBASIC-0.5□□□□□ -2.49
SMIM28A0A1B0GU29 MIR9-2-201ENST00000384838 87 ntBASIC-0.5□□□□□ -2.49
SMIM28A0A1B0GU29 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.5□□□□□ -2.49
SMIM28A0A1B0GU29 RNU6-762P-201ENST00000517107 102 ntBASIC-0.5□□□□□ -2.49
SMIM28A0A1B0GU29 AC145423.2-201ENST00000610631 239 ntBASIC-0.5□□□□□ -2.49
SMIM28A0A1B0GU29 MIR582-201ENST00000365731 98 ntBASIC-0.51□□□□□ -2.49
SMIM28A0A1B0GU29 AC244090.1-201ENST00000441884 93 ntBASIC-0.51□□□□□ -2.49
SMIM28A0A1B0GU29 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.51□□□□□ -2.49
SMIM28A0A1B0GU29 MIR5589-201ENST00000579442 60 ntBASIC-0.51□□□□□ -2.49
SMIM28A0A1B0GU29 MIR4645-201ENST00000583158 77 ntBASIC-0.51□□□□□ -2.49
SMIM28A0A1B0GU29 MIR4263-201ENST00000584745 83 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 197.9 ms