Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 Y_RNA.275-201ENST00000364726 110 ntBASIC-2.41□□□□□ -2.8
TRAV12-3A0A0B4J271 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.41□□□□□ -2.8
TRAV12-3A0A0B4J271 Y_RNA.485-201ENST00000384395 102 ntBASIC-2.41□□□□□ -2.8
TRAV12-3A0A0B4J271 SNORD116-6-201ENST00000384711 96 ntBASIC-2.41□□□□□ -2.8
TRAV12-3A0A0B4J271 Y_RNA.584-201ENST00000391090 114 ntBASIC-2.41□□□□□ -2.8
TRAV12-3A0A0B4J271 RNU6-695P-201ENST00000391157 104 ntBASIC-2.41□□□□□ -2.8
TRAV12-3A0A0B4J271 MIR1207-201ENST00000408249 87 ntBASIC-2.41□□□□□ -2.8
TRAV12-3A0A0B4J271 RNU7-154P-201ENST00000516194 62 ntBASIC-2.41□□□□□ -2.8
TRAV12-3A0A0B4J271 RNY4P20-201ENST00000516678 93 ntBASIC-2.41□□□□□ -2.8
TRAV12-3A0A0B4J271 RNU7-6P-201ENST00000516845 62 ntBASIC-2.41□□□□□ -2.8
TRAV12-3A0A0B4J271 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.42□□□□□ -2.8
TRAV12-3A0A0B4J271 Y_RNA.117-201ENST00000363294 101 ntBASIC-2.42□□□□□ -2.8
TRAV12-3A0A0B4J271 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.42□□□□□ -2.8
TRAV12-3A0A0B4J271 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.42□□□□□ -2.8
TRAV12-3A0A0B4J271 Z83846.1-201ENST00000446798 265 ntBASIC-2.42□□□□□ -2.8
TRAV12-3A0A0B4J271 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-2.42□□□□□ -2.8
TRAV12-3A0A0B4J271 MIR4723-201ENST00000585070 81 ntBASIC-2.42□□□□□ -2.8
TRAV12-3A0A0B4J271 RNU6-1313P-201ENST00000362622 102 ntBASIC-2.43□□□□□ -2.8
TRAV12-3A0A0B4J271 RNU6-194P-201ENST00000363862 105 ntBASIC-2.43□□□□□ -2.8
TRAV12-3A0A0B4J271 RNU6-841P-201ENST00000383872 107 ntBASIC-2.43□□□□□ -2.8
TRAV12-3A0A0B4J271 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.43□□□□□ -2.8
TRAV12-3A0A0B4J271 SNORD2.1-201ENST00000458762 69 ntBASIC-2.43□□□□□ -2.8
TRAV12-3A0A0B4J271 MIR4744-201ENST00000581563 82 ntBASIC-2.43□□□□□ -2.8
TRAV12-3A0A0B4J271 AC092794.1-201ENST00000612734 582 ntBASIC-2.43□□□□□ -2.8
TRAV12-3A0A0B4J271 AL512310.12-203ENST00000640543 90 ntBASIC-2.43□□□□□ -2.8
TRAV12-3A0A0B4J271 Y_RNA.154-201ENST00000363624 102 ntBASIC-2.44□□□□□ -2.8
TRAV12-3A0A0B4J271 SNORD19-201ENST00000391191 68 ntBASIC-2.44□□□□□ -2.8
TRAV12-3A0A0B4J271 snoU13.17-201ENST00000458802 104 ntBASIC-2.44□□□□□ -2.8
TRAV12-3A0A0B4J271 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.45□□□□□ -2.8
TRAV12-3A0A0B4J271 RNU6-643P-201ENST00000384018 107 ntBASIC-2.45□□□□□ -2.8
TRAV12-3A0A0B4J271 SNORA24B-201ENST00000384176 131 ntBASIC-2.45□□□□□ -2.8
TRAV12-3A0A0B4J271 Y_RNA.793-201ENST00000411222 111 ntBASIC-2.45□□□□□ -2.8
TRAV12-3A0A0B4J271 ELOCP20-201ENST00000422460 345 ntBASIC-2.45□□□□□ -2.8
TRAV12-3A0A0B4J271 RNU6-65P-201ENST00000516332 98 ntBASIC-2.45□□□□□ -2.8
TRAV12-3A0A0B4J271 MIR3140-201ENST00000583685 90 ntBASIC-2.45□□□□□ -2.8
TRAV12-3A0A0B4J271 MIR548AM-201ENST00000584298 74 ntBASIC-2.45□□□□□ -2.8
TRAV12-3A0A0B4J271 AL365265.1-201ENST00000621045 234 ntBASIC-2.45□□□□□ -2.8
TRAV12-3A0A0B4J271 RNU6-260P-201ENST00000384092 107 ntBASIC-2.46□□□□□ -2.8
TRAV12-3A0A0B4J271 MT-TM-201ENST00000387377 68 ntBASIC-2.46□□□□□ -2.8
TRAV12-3A0A0B4J271 RNU6-121P-201ENST00000410525 99 ntBASIC-2.46□□□□□ -2.8
TRAV12-3A0A0B4J271 Y_RNA.661-201ENST00000516003 99 ntBASIC-2.46□□□□□ -2.8
TRAV12-3A0A0B4J271 MIR4536-1-201ENST00000583537 88 ntBASIC-2.46□□□□□ -2.8
TRAV12-3A0A0B4J271 MIR1255B1-201ENST00000636325 63 ntBASIC-2.46□□□□□ -2.8
TRAV12-3A0A0B4J271 SNORA7.5-201ENST00000410672 110 ntBASIC-2.47□□□□□ -2.8
TRAV12-3A0A0B4J271 RNU2-16P-201ENST00000410712 136 ntBASIC-2.47□□□□□ -2.8
TRAV12-3A0A0B4J271 AC090574.1-201ENST00000623186 233 ntBASIC-2.47□□□□□ -2.8
TRAV12-3A0A0B4J271 RNU6-774P-201ENST00000363238 107 ntBASIC-2.48□□□□□ -2.81
TRAV12-3A0A0B4J271 Y_RNA.554-201ENST00000384672 102 ntBASIC-2.48□□□□□ -2.81
TRAV12-3A0A0B4J271 RNU6-578P-201ENST00000390980 103 ntBASIC-2.48□□□□□ -2.81
TRAV12-3A0A0B4J271 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.48□□□□□ -2.81
TRAV12-3A0A0B4J271 MIR3123-201ENST00000583417 75 ntBASIC-2.48□□□□□ -2.81
TRAV12-3A0A0B4J271 Y_RNA.252-201ENST00000364556 101 ntBASIC-2.49□□□□□ -2.81
TRAV12-3A0A0B4J271 SNORA63.7-201ENST00000365579 123 ntBASIC-2.49□□□□□ -2.81
TRAV12-3A0A0B4J271 Y_RNA.651-201ENST00000459380 103 ntBASIC-2.49□□□□□ -2.81
TRAV12-3A0A0B4J271 RNU6-976P-201ENST00000516086 111 ntBASIC-2.49□□□□□ -2.81
TRAV12-3A0A0B4J271 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.49□□□□□ -2.81
TRAV12-3A0A0B4J271 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.49□□□□□ -2.81
TRAV12-3A0A0B4J271 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.49□□□□□ -2.81
TRAV12-3A0A0B4J271 Y_RNA.82-201ENST00000363000 102 ntBASIC-2.5□□□□□ -2.81
TRAV12-3A0A0B4J271 Y_RNA.92-201ENST00000363043 102 ntBASIC-2.5□□□□□ -2.81
TRAV12-3A0A0B4J271 Y_RNA.235-201ENST00000364412 102 ntBASIC-2.5□□□□□ -2.81
TRAV12-3A0A0B4J271 Y_RNA.306-201ENST00000365015 102 ntBASIC-2.5□□□□□ -2.81
TRAV12-3A0A0B4J271 Y_RNA.312-201ENST00000365089 102 ntBASIC-2.5□□□□□ -2.81
TRAV12-3A0A0B4J271 Y_RNA.322-201ENST00000365151 102 ntBASIC-2.5□□□□□ -2.81
TRAV12-3A0A0B4J271 MIR519A2-201ENST00000384990 87 ntBASIC-2.5□□□□□ -2.81
TRAV12-3A0A0B4J271 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.5□□□□□ -2.81
TRAV12-3A0A0B4J271 RNU4-88P-201ENST00000411220 86 ntBASIC-2.5□□□□□ -2.81
TRAV12-3A0A0B4J271 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-2.5□□□□□ -2.81
TRAV12-3A0A0B4J271 Y_RNA.650-201ENST00000459002 102 ntBASIC-2.5□□□□□ -2.81
TRAV12-3A0A0B4J271 RNA5SP147-201ENST00000516493 109 ntBASIC-2.5□□□□□ -2.81
TRAV12-3A0A0B4J271 Y_RNA.777-201ENST00000516982 102 ntBASIC-2.5□□□□□ -2.81
TRAV12-3A0A0B4J271 Y_RNA.771-201ENST00000598668 102 ntBASIC-2.5□□□□□ -2.81
TRAV12-3A0A0B4J271 Y_RNA.804-201ENST00000615262 101 ntBASIC-2.5□□□□□ -2.81
TRAV12-3A0A0B4J271 Y_RNA.789-201ENST00000622480 102 ntBASIC-2.5□□□□□ -2.81
TRAV12-3A0A0B4J271 Y_RNA.16-201ENST00000362421 102 ntBASIC-2.51□□□□□ -2.81
TRAV12-3A0A0B4J271 MIR3163-201ENST00000581592 73 ntBASIC-2.51□□□□□ -2.81
TRAV12-3A0A0B4J271 AC080013.6-201ENST00000606185 215 ntBASIC-2.51□□□□□ -2.81
TRAV12-3A0A0B4J271 AL137067.1-201ENST00000615933 120 ntBASIC-2.51□□□□□ -2.81
TRAV12-3A0A0B4J271 RNU6-132P-201ENST00000383863 107 ntBASIC-2.52□□□□□ -2.81
TRAV12-3A0A0B4J271 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.52□□□□□ -2.81
TRAV12-3A0A0B4J271 MT-TI-201ENST00000387365 69 ntBASIC-2.52□□□□□ -2.81
TRAV12-3A0A0B4J271 RNU6-651P-201ENST00000411040 105 ntBASIC-2.52□□□□□ -2.81
TRAV12-3A0A0B4J271 SNORD54-201ENST00000459159 67 ntBASIC-2.52□□□□□ -2.81
TRAV12-3A0A0B4J271 RNU6-1018P-201ENST00000516577 106 ntBASIC-2.52□□□□□ -2.81
TRAV12-3A0A0B4J271 AL132765.2-201ENST00000610812 351 ntBASIC-2.52□□□□□ -2.81
TRAV12-3A0A0B4J271 AC078883.4-201ENST00000623218 367 ntBASIC-2.52□□□□□ -2.81
TRAV12-3A0A0B4J271 MIR1302-11-201ENST00000408051 138 ntBASIC-2.53□□□□□ -2.81
TRAV12-3A0A0B4J271 MIR1302-9-201ENST00000408365 138 ntBASIC-2.53□□□□□ -2.81
TRAV12-3A0A0B4J271 MIR1302-10-201ENST00000408734 138 ntBASIC-2.53□□□□□ -2.81
TRAV12-3A0A0B4J271 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.53□□□□□ -2.81
TRAV12-3A0A0B4J271 U7.5-201ENST00000517224 61 ntBASIC-2.53□□□□□ -2.81
TRAV12-3A0A0B4J271 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-2.53□□□□□ -2.81
TRAV12-3A0A0B4J271 AC006254.2-201ENST00000603259 279 ntBASIC-2.53□□□□□ -2.81
TRAV12-3A0A0B4J271 MIR1302-2-201ENST00000607096 138 ntBASIC-2.53□□□□□ -2.81
TRAV12-3A0A0B4J271 Y_RNA.248-201ENST00000364501 109 ntBASIC-2.54□□□□□ -2.82
TRAV12-3A0A0B4J271 RNU6-818P-201ENST00000364837 108 ntBASIC-2.54□□□□□ -2.82
TRAV12-3A0A0B4J271 SNORD50.2-201ENST00000365465 70 ntBASIC-2.54□□□□□ -2.82
TRAV12-3A0A0B4J271 RNU7-88P-201ENST00000458752 63 ntBASIC-2.54□□□□□ -2.82
TRAV12-3A0A0B4J271 AC113139.1-201ENST00000605049 239 ntBASIC-2.54□□□□□ -2.82
TRAV12-3A0A0B4J271 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.54□□□□□ -2.82
Retrieved 100 of 98,524 protein–RNA pairs in 322.7 ms