Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.89□□□□□ -2.27
GTF3C3Q9Y5Q9 RNU6-1053P-201ENST00000515930 101 ntBASIC0.89□□□□□ -2.27
GTF3C3Q9Y5Q9 MIR2052-201ENST00000636055 55 ntBASIC0.89□□□□□ -2.27
GTF3C3Q9Y5Q9 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.89□□□□□ -2.27
GTF3C3Q9Y5Q9 Y_RNA.467-201ENST00000384297 102 ntBASIC0.88□□□□□ -2.27
GTF3C3Q9Y5Q9 SNORD41.1-201ENST00000391000 69 ntBASIC0.88□□□□□ -2.27
GTF3C3Q9Y5Q9 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.88□□□□□ -2.27
GTF3C3Q9Y5Q9 RNU6-537P-201ENST00000517277 103 ntBASIC0.88□□□□□ -2.27
GTF3C3Q9Y5Q9 AC103810.7-201ENST00000607821 91 ntBASIC0.88□□□□□ -2.27
GTF3C3Q9Y5Q9 MIR7107-201ENST00000611489 80 ntBASIC0.88□□□□□ -2.27
GTF3C3Q9Y5Q9 Y_RNA.648-201ENST00000459455 110 ntBASIC0.87□□□□□ -2.27
GTF3C3Q9Y5Q9 MIR3973-201ENST00000579824 107 ntBASIC0.87□□□□□ -2.27
GTF3C3Q9Y5Q9 TRDV1-202ENST00000621643 102 ntBASIC0.87□□□□□ -2.27
GTF3C3Q9Y5Q9 RNU6-1126P-201ENST00000384002 107 ntBASIC0.86□□□□□ -2.27
GTF3C3Q9Y5Q9 RNU6-887P-201ENST00000410660 100 ntBASIC0.85□□□□□ -2.27
GTF3C3Q9Y5Q9 RNU6-1265P-201ENST00000516342 103 ntBASIC0.85□□□□□ -2.27
GTF3C3Q9Y5Q9 AL513043.2-201ENST00000573941 143 ntBASIC0.85□□□□□ -2.27
GTF3C3Q9Y5Q9 AC025521.1-201ENST00000621624 286 ntBASIC0.85□□□□□ -2.27
GTF3C3Q9Y5Q9 RNY1P10-201ENST00000363268 113 ntBASIC0.84□□□□□ -2.27
GTF3C3Q9Y5Q9 AL157398.1-201ENST00000452981 186 ntBASIC0.84□□□□□ -2.27
GTF3C3Q9Y5Q9 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.84□□□□□ -2.27
GTF3C3Q9Y5Q9 Y_RNA.596-201ENST00000410462 109 ntBASIC0.83□□□□□ -2.28
GTF3C3Q9Y5Q9 RNU6-848P-201ENST00000515948 107 ntBASIC0.83□□□□□ -2.28
GTF3C3Q9Y5Q9 RNU6-617P-201ENST00000516147 107 ntBASIC0.83□□□□□ -2.28
GTF3C3Q9Y5Q9 RNU6-473P-201ENST00000516164 107 ntBASIC0.83□□□□□ -2.28
GTF3C3Q9Y5Q9 RNU6-1049P-201ENST00000516414 107 ntBASIC0.83□□□□□ -2.28
GTF3C3Q9Y5Q9 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.83□□□□□ -2.28
GTF3C3Q9Y5Q9 uc_338.17-201ENST00000619633 179 ntBASIC0.83□□□□□ -2.28
GTF3C3Q9Y5Q9 MIR6767-201ENST00000637302 66 ntBASIC0.83□□□□□ -2.28
GTF3C3Q9Y5Q9 AC090625.1-201ENST00000357130 210 ntBASIC0.82□□□□□ -2.28
GTF3C3Q9Y5Q9 MIR96-201ENST00000362288 78 ntBASIC0.82□□□□□ -2.28
GTF3C3Q9Y5Q9 RNU6-44P-201ENST00000384045 107 ntBASIC0.82□□□□□ -2.28
GTF3C3Q9Y5Q9 MIR92A1-201ENST00000385233 78 ntBASIC0.82□□□□□ -2.28
GTF3C3Q9Y5Q9 RNA5SP102-201ENST00000516865 106 ntBASIC0.82□□□□□ -2.28
GTF3C3Q9Y5Q9 RNU6-158P-201ENST00000517104 100 ntBASIC0.82□□□□□ -2.28
GTF3C3Q9Y5Q9 MIR450A1-201ENST00000362262 91 ntBASIC0.81□□□□□ -2.28
GTF3C3Q9Y5Q9 RNU6-509P-201ENST00000363519 107 ntBASIC0.81□□□□□ -2.28
GTF3C3Q9Y5Q9 MIR3920-201ENST00000581751 86 ntBASIC0.81□□□□□ -2.28
GTF3C3Q9Y5Q9 MIR337-201ENST00000362281 93 ntBASIC0.8□□□□□ -2.28
GTF3C3Q9Y5Q9 Y_RNA.466-201ENST00000384294 113 ntBASIC0.8□□□□□ -2.28
GTF3C3Q9Y5Q9 RNU6-109P-201ENST00000516364 107 ntBASIC0.8□□□□□ -2.28
GTF3C3Q9Y5Q9 RNU6-184P-201ENST00000516514 107 ntBASIC0.8□□□□□ -2.28
GTF3C3Q9Y5Q9 MIR373-201ENST00000362273 69 ntBASIC0.79□□□□□ -2.28
GTF3C3Q9Y5Q9 SNORD44.1-201ENST00000363202 61 ntBASIC0.79□□□□□ -2.28
GTF3C3Q9Y5Q9 RNU6-957P-201ENST00000363652 99 ntBASIC0.79□□□□□ -2.28
GTF3C3Q9Y5Q9 MIR216A-201ENST00000385063 110 ntBASIC0.79□□□□□ -2.28
GTF3C3Q9Y5Q9 RNU6-65P-201ENST00000516332 98 ntBASIC0.79□□□□□ -2.28
GTF3C3Q9Y5Q9 MIR548Z-201ENST00000584743 97 ntBASIC0.79□□□□□ -2.28
GTF3C3Q9Y5Q9 AC073869.9-201ENST00000641610 120 ntBASIC0.79□□□□□ -2.28
GTF3C3Q9Y5Q9 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
GTF3C3Q9Y5Q9 SNORA63.4-201ENST00000362763 126 ntBASIC0.78□□□□□ -2.28
GTF3C3Q9Y5Q9 Y_RNA.283-201ENST00000364798 112 ntBASIC0.78□□□□□ -2.28
GTF3C3Q9Y5Q9 SNORD58A-201ENST00000383875 65 ntBASIC0.78□□□□□ -2.28
GTF3C3Q9Y5Q9 MIR4536-1-201ENST00000583537 88 ntBASIC0.78□□□□□ -2.28
GTF3C3Q9Y5Q9 AL162376.1-201ENST00000624117 175 ntBASIC0.78□□□□□ -2.28
GTF3C3Q9Y5Q9 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
GTF3C3Q9Y5Q9 MIRLET7D-201ENST00000362263 87 ntBASIC0.77□□□□□ -2.29
GTF3C3Q9Y5Q9 RNU6-32P-201ENST00000383948 107 ntBASIC0.77□□□□□ -2.29
GTF3C3Q9Y5Q9 RNU6-13P-201ENST00000384248 107 ntBASIC0.77□□□□□ -2.29
GTF3C3Q9Y5Q9 RNU6-12P-201ENST00000384604 107 ntBASIC0.77□□□□□ -2.29
GTF3C3Q9Y5Q9 RNU6-41P-201ENST00000384741 107 ntBASIC0.77□□□□□ -2.29
GTF3C3Q9Y5Q9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.77□□□□□ -2.29
GTF3C3Q9Y5Q9 AC069271.1-201ENST00000445577 156 ntBASIC0.77□□□□□ -2.29
GTF3C3Q9Y5Q9 RPS29P1-201ENST00000465274 159 ntBASIC0.77□□□□□ -2.29
GTF3C3Q9Y5Q9 SNORA68.3-201ENST00000515906 83 ntBASIC0.77□□□□□ -2.29
GTF3C3Q9Y5Q9 SNORD116-10-201ENST00000363791 102 ntBASIC0.76□□□□□ -2.29
GTF3C3Q9Y5Q9 Y_RNA.508-201ENST00000384502 114 ntBASIC0.76□□□□□ -2.29
GTF3C3Q9Y5Q9 snoU13.11-201ENST00000459219 104 ntBASIC0.76□□□□□ -2.29
GTF3C3Q9Y5Q9 SNORA40.13-201ENST00000516379 120 ntBASIC0.75□□□□□ -2.29
GTF3C3Q9Y5Q9 RNU1-93P-201ENST00000364704 169 ntBASIC0.74□□□□□ -2.29
GTF3C3Q9Y5Q9 MIR617-201ENST00000385030 97 ntBASIC0.73□□□□□ -2.29
GTF3C3Q9Y5Q9 MTATP8P2-201ENST00000435212 202 ntBASIC0.73□□□□□ -2.29
GTF3C3Q9Y5Q9 RNU7-61P-201ENST00000515897 61 ntBASIC0.73□□□□□ -2.29
GTF3C3Q9Y5Q9 RNU6-269P-201ENST00000391077 97 ntBASIC0.72□□□□□ -2.29
GTF3C3Q9Y5Q9 AL161932.1-201ENST00000437408 146 ntBASIC0.72□□□□□ -2.29
GTF3C3Q9Y5Q9 RNU6-1057P-201ENST00000517162 102 ntBASIC0.72□□□□□ -2.29
GTF3C3Q9Y5Q9 SNORA2A-201ENST00000383885 135 ntBASIC0.71□□□□□ -2.3
GTF3C3Q9Y5Q9 RNU6-147P-201ENST00000383983 107 ntBASIC0.71□□□□□ -2.3
GTF3C3Q9Y5Q9 SNORD101-201ENST00000384027 73 ntBASIC0.71□□□□□ -2.3
GTF3C3Q9Y5Q9 MIR1276-201ENST00000408707 83 ntBASIC0.71□□□□□ -2.3
GTF3C3Q9Y5Q9 RNU6-287P-201ENST00000516230 98 ntBASIC0.71□□□□□ -2.3
GTF3C3Q9Y5Q9 MIR5706-201ENST00000579841 80 ntBASIC0.71□□□□□ -2.3
GTF3C3Q9Y5Q9 MTRNR2L2-201ENST00000604882 87 ntBASIC0.71□□□□□ -2.3
GTF3C3Q9Y5Q9 U7.6-201ENST00000610841 64 ntBASIC0.71□□□□□ -2.3
GTF3C3Q9Y5Q9 AP001318.4-201ENST00000616637 121 ntBASIC0.71□□□□□ -2.3
GTF3C3Q9Y5Q9 RNU6-664P-201ENST00000362381 107 ntBASIC0.7□□□□□ -2.3
GTF3C3Q9Y5Q9 RNU6-519P-201ENST00000410590 108 ntBASIC0.7□□□□□ -2.3
GTF3C3Q9Y5Q9 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
GTF3C3Q9Y5Q9 U6.100-201ENST00000636230 99 ntBASIC0.7□□□□□ -2.3
GTF3C3Q9Y5Q9 SNORD114-22-201ENST00000365423 72 ntBASIC0.69□□□□□ -2.3
GTF3C3Q9Y5Q9 Y_RNA.164-201ENST00000363709 102 ntBASIC0.68□□□□□ -2.3
GTF3C3Q9Y5Q9 Y_RNA.239-201ENST00000364444 113 ntBASIC0.68□□□□□ -2.3
GTF3C3Q9Y5Q9 RNU6-1327P-201ENST00000365302 105 ntBASIC0.68□□□□□ -2.3
GTF3C3Q9Y5Q9 Y_RNA.423-201ENST00000384057 113 ntBASIC0.68□□□□□ -2.3
GTF3C3Q9Y5Q9 MIR216B-201ENST00000390186 82 ntBASIC0.68□□□□□ -2.3
GTF3C3Q9Y5Q9 RNU6-229P-201ENST00000516614 102 ntBASIC0.68□□□□□ -2.3
GTF3C3Q9Y5Q9 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.68□□□□□ -2.3
GTF3C3Q9Y5Q9 MIR8070-201ENST00000616510 88 ntBASIC0.68□□□□□ -2.3
GTF3C3Q9Y5Q9 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.67□□□□□ -2.3
GTF3C3Q9Y5Q9 Y_RNA.207-201ENST00000364142 106 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms