Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 U6.100-201ENST00000636230 99 ntBASIC1.7□□□□□ -2.14
FNDC3AQ9Y2H6 RNA5SP327-201ENST00000362494 101 ntBASIC1.69□□□□□ -2.14
FNDC3AQ9Y2H6 RNU6-315P-201ENST00000362666 107 ntBASIC1.69□□□□□ -2.14
FNDC3AQ9Y2H6 Y_RNA.118-201ENST00000363300 101 ntBASIC1.69□□□□□ -2.14
FNDC3AQ9Y2H6 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.69□□□□□ -2.14
FNDC3AQ9Y2H6 AC002429.1-201ENST00000437672 148 ntBASIC1.69□□□□□ -2.14
FNDC3AQ9Y2H6 RNU7-95P-201ENST00000459222 64 ntBASIC1.69□□□□□ -2.14
FNDC3AQ9Y2H6 SNORA25.9-201ENST00000365087 128 ntBASIC1.68□□□□□ -2.14
FNDC3AQ9Y2H6 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.68□□□□□ -2.14
FNDC3AQ9Y2H6 RNU6-1296P-201ENST00000383879 107 ntBASIC1.67□□□□□ -2.14
FNDC3AQ9Y2H6 BX248123.2-201ENST00000606318 124 ntBASIC1.67□□□□□ -2.14
FNDC3AQ9Y2H6 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
FNDC3AQ9Y2H6 RNU6-664P-201ENST00000362381 107 ntBASIC1.66□□□□□ -2.14
FNDC3AQ9Y2H6 AC067940.1-201ENST00000458411 300 ntBASIC1.66□□□□□ -2.14
FNDC3AQ9Y2H6 MIR4696-201ENST00000581431 70 ntBASIC1.66□□□□□ -2.14
FNDC3AQ9Y2H6 Y_RNA.239-201ENST00000364444 113 ntBASIC1.65□□□□□ -2.15
FNDC3AQ9Y2H6 RNA5SP363-201ENST00000365072 115 ntBASIC1.65□□□□□ -2.15
FNDC3AQ9Y2H6 Y_RNA.355-201ENST00000365462 98 ntBASIC1.65□□□□□ -2.15
FNDC3AQ9Y2H6 SNORD101-201ENST00000384027 73 ntBASIC1.65□□□□□ -2.15
FNDC3AQ9Y2H6 SNORA25-201ENST00000384384 134 ntBASIC1.65□□□□□ -2.15
FNDC3AQ9Y2H6 SNORD12-201ENST00000391002 90 ntBASIC1.65□□□□□ -2.15
FNDC3AQ9Y2H6 MIR1827-201ENST00000408549 66 ntBASIC1.65□□□□□ -2.15
FNDC3AQ9Y2H6 RNU6-557P-201ENST00000516842 110 ntBASIC1.65□□□□□ -2.15
FNDC3AQ9Y2H6 MIRLET7A1-201ENST00000362295 80 ntBASIC1.64□□□□□ -2.15
FNDC3AQ9Y2H6 RNU6-686P-201ENST00000364839 107 ntBASIC1.64□□□□□ -2.15
FNDC3AQ9Y2H6 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.63□□□□□ -2.15
FNDC3AQ9Y2H6 RNU6-1094P-201ENST00000362416 104 ntBASIC1.63□□□□□ -2.15
FNDC3AQ9Y2H6 Y_RNA.32-201ENST00000362589 110 ntBASIC1.63□□□□□ -2.15
FNDC3AQ9Y2H6 FGF7P7-201ENST00000514120 227 ntBASIC1.63□□□□□ -2.15
FNDC3AQ9Y2H6 SNORA31.14-201ENST00000516728 116 ntBASIC1.63□□□□□ -2.15
FNDC3AQ9Y2H6 RMST_2.1-201ENST00000617263 136 ntBASIC1.63□□□□□ -2.15
FNDC3AQ9Y2H6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
FNDC3AQ9Y2H6 Y_RNA.596-201ENST00000410462 109 ntBASIC1.62□□□□□ -2.15
FNDC3AQ9Y2H6 AC244505.6-201ENST00000452829 130 ntBASIC1.62□□□□□ -2.15
FNDC3AQ9Y2H6 snoU13.17-201ENST00000458802 104 ntBASIC1.62□□□□□ -2.15
FNDC3AQ9Y2H6 MIR3122-201ENST00000577243 73 ntBASIC1.62□□□□□ -2.15
FNDC3AQ9Y2H6 SNORD53B-201ENST00000577887 78 ntBASIC1.62□□□□□ -2.15
FNDC3AQ9Y2H6 AC145423.2-201ENST00000610631 239 ntBASIC1.62□□□□□ -2.15
FNDC3AQ9Y2H6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.62□□□□□ -2.15
FNDC3AQ9Y2H6 ZNF209P-201ENST00000593450 2304 ntBASIC1.61□□□□□ -2.15
FNDC3AQ9Y2H6 RNU1-42P-201ENST00000364033 160 ntBASIC1.61□□□□□ -2.15
FNDC3AQ9Y2H6 RNU6-1229P-201ENST00000364295 107 ntBASIC1.61□□□□□ -2.15
FNDC3AQ9Y2H6 RNU6-1051P-201ENST00000365471 102 ntBASIC1.61□□□□□ -2.15
FNDC3AQ9Y2H6 MIR520H-201ENST00000385126 88 ntBASIC1.61□□□□□ -2.15
FNDC3AQ9Y2H6 SNORD89-201ENST00000390981 114 ntBASIC1.61□□□□□ -2.15
FNDC3AQ9Y2H6 SNORD77.2-201ENST00000391045 68 ntBASIC1.61□□□□□ -2.15
FNDC3AQ9Y2H6 uc_338.16-201ENST00000621804 95 ntBASIC1.61□□□□□ -2.15
FNDC3AQ9Y2H6 RNU6-208P-201ENST00000362431 107 ntBASIC1.6□□□□□ -2.15
FNDC3AQ9Y2H6 Y_RNA.327-201ENST00000365201 102 ntBASIC1.6□□□□□ -2.15
FNDC3AQ9Y2H6 RNU6-1265P-201ENST00000516342 103 ntBASIC1.6□□□□□ -2.15
FNDC3AQ9Y2H6 MIR3140-201ENST00000583685 90 ntBASIC1.6□□□□□ -2.15
FNDC3AQ9Y2H6 U7.4-201ENST00000614961 63 ntBASIC1.6□□□□□ -2.15
FNDC3AQ9Y2H6 Y_RNA.788-201ENST00000622394 112 ntBASIC1.6□□□□□ -2.15
FNDC3AQ9Y2H6 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
FNDC3AQ9Y2H6 MTRNR2L2-201ENST00000604882 87 ntBASIC1.59□□□□□ -2.15
FNDC3AQ9Y2H6 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.59□□□□□ -2.15
FNDC3AQ9Y2H6 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.59□□□□□ -2.15
FNDC3AQ9Y2H6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.59□□□□□ -2.16
FNDC3AQ9Y2H6 RNU6-1052P-201ENST00000411398 104 ntBASIC1.58□□□□□ -2.16
FNDC3AQ9Y2H6 SCARNA18B-201ENST00000458806 135 ntBASIC1.58□□□□□ -2.16
FNDC3AQ9Y2H6 Y_RNA.660-201ENST00000516002 120 ntBASIC1.58□□□□□ -2.16
FNDC3AQ9Y2H6 RNU6-719P-201ENST00000516671 104 ntBASIC1.58□□□□□ -2.16
FNDC3AQ9Y2H6 RNU1-92P-201ENST00000517017 135 ntBASIC1.58□□□□□ -2.16
FNDC3AQ9Y2H6 MIR4484-201ENST00000582855 83 ntBASIC1.58□□□□□ -2.16
FNDC3AQ9Y2H6 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
FNDC3AQ9Y2H6 SNORD115-24-201ENST00000363528 82 ntBASIC1.57□□□□□ -2.16
FNDC3AQ9Y2H6 Y_RNA.207-201ENST00000364142 106 ntBASIC1.57□□□□□ -2.16
FNDC3AQ9Y2H6 RNU6-392P-201ENST00000364926 101 ntBASIC1.57□□□□□ -2.16
FNDC3AQ9Y2H6 SNORA67.6-201ENST00000391093 99 ntBASIC1.57□□□□□ -2.16
FNDC3AQ9Y2H6 MIR1323-201ENST00000408090 73 ntBASIC1.57□□□□□ -2.16
FNDC3AQ9Y2H6 RNU6-380P-201ENST00000410207 107 ntBASIC1.57□□□□□ -2.16
FNDC3AQ9Y2H6 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.57□□□□□ -2.16
FNDC3AQ9Y2H6 Y_RNA.224-201ENST00000364308 111 ntBASIC1.56□□□□□ -2.16
FNDC3AQ9Y2H6 MIR489-201ENST00000384923 84 ntBASIC1.56□□□□□ -2.16
FNDC3AQ9Y2H6 Y_RNA.174-201ENST00000363781 105 ntBASIC1.55□□□□□ -2.16
FNDC3AQ9Y2H6 Y_RNA.532-201ENST00000384590 113 ntBASIC1.55□□□□□ -2.16
FNDC3AQ9Y2H6 Y_RNA.565-201ENST00000384719 101 ntBASIC1.55□□□□□ -2.16
FNDC3AQ9Y2H6 MIR1276-201ENST00000408707 83 ntBASIC1.55□□□□□ -2.16
FNDC3AQ9Y2H6 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.55□□□□□ -2.16
FNDC3AQ9Y2H6 AL136317.1-201ENST00000612653 226 ntBASIC1.55□□□□□ -2.16
FNDC3AQ9Y2H6 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.55□□□□□ -2.16
FNDC3AQ9Y2H6 SNORA7.1-201ENST00000363750 139 ntBASIC1.54□□□□□ -2.16
FNDC3AQ9Y2H6 Y_RNA.264-201ENST00000364665 102 ntBASIC1.54□□□□□ -2.16
FNDC3AQ9Y2H6 MIR644A-201ENST00000385262 94 ntBASIC1.54□□□□□ -2.16
FNDC3AQ9Y2H6 MIR1304-201ENST00000408243 91 ntBASIC1.54□□□□□ -2.16
FNDC3AQ9Y2H6 RNU6-935P-201ENST00000410371 100 ntBASIC1.54□□□□□ -2.16
FNDC3AQ9Y2H6 SNORD124-201ENST00000459577 104 ntBASIC1.54□□□□□ -2.16
FNDC3AQ9Y2H6 RNU6-287P-201ENST00000516230 98 ntBASIC1.54□□□□□ -2.16
FNDC3AQ9Y2H6 Y_RNA.12-201ENST00000362393 112 ntBASIC1.53□□□□□ -2.16
FNDC3AQ9Y2H6 RNU5F-1-201ENST00000362507 117 ntBASIC1.53□□□□□ -2.16
FNDC3AQ9Y2H6 RNY4P3-201ENST00000365254 95 ntBASIC1.53□□□□□ -2.16
FNDC3AQ9Y2H6 MIR451A-201ENST00000385059 72 ntBASIC1.53□□□□□ -2.16
FNDC3AQ9Y2H6 AC002350.1-201ENST00000490759 375 ntBASIC1.53□□□□□ -2.16
FNDC3AQ9Y2H6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
FNDC3AQ9Y2H6 RNA5SP117-201ENST00000365294 118 ntBASIC1.52□□□□□ -2.17
FNDC3AQ9Y2H6 SNORD105-201ENST00000386910 85 ntBASIC1.52□□□□□ -2.17
FNDC3AQ9Y2H6 RNU6-1110P-201ENST00000516462 101 ntBASIC1.52□□□□□ -2.17
FNDC3AQ9Y2H6 RNU7-161P-201ENST00000517289 62 ntBASIC1.52□□□□□ -2.17
FNDC3AQ9Y2H6 MIR4421-201ENST00000578133 69 ntBASIC1.52□□□□□ -2.17
FNDC3AQ9Y2H6 MIR3134-201ENST00000579433 74 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms