Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 TRDV1-202ENST00000621643 102 ntBASIC1.48□□□□□ -2.17
BRPF3Q9ULD4 MIR378A-201ENST00000362177 66 ntBASIC1.47□□□□□ -2.17
BRPF3Q9ULD4 AC006160.2-201ENST00000637708 154 ntBASIC1.47□□□□□ -2.17
BRPF3Q9ULD4 AL606490.4-201ENST00000423117 127 ntBASIC1.46□□□□□ -2.18
BRPF3Q9ULD4 AC002350.1-201ENST00000490759 375 ntBASIC1.46□□□□□ -2.18
BRPF3Q9ULD4 MIR1245B-201ENST00000636115 69 ntBASIC1.46□□□□□ -2.18
BRPF3Q9ULD4 RNA5SP117-201ENST00000365294 118 ntBASIC1.45□□□□□ -2.18
BRPF3Q9ULD4 RNU6-811P-201ENST00000384069 107 ntBASIC1.45□□□□□ -2.18
BRPF3Q9ULD4 RNU7-171P-201ENST00000459581 62 ntBASIC1.45□□□□□ -2.18
BRPF3Q9ULD4 OR2A41P-201ENST00000473586 105 ntBASIC1.45□□□□□ -2.18
BRPF3Q9ULD4 SNORD115-37-201ENST00000363768 82 ntBASIC1.44□□□□□ -2.18
BRPF3Q9ULD4 Y_RNA.221-201ENST00000364248 96 ntBASIC1.44□□□□□ -2.18
BRPF3Q9ULD4 RNU6-1335P-201ENST00000365426 107 ntBASIC1.44□□□□□ -2.18
BRPF3Q9ULD4 Y_RNA.508-201ENST00000384502 114 ntBASIC1.44□□□□□ -2.18
BRPF3Q9ULD4 AL603825.1-201ENST00000438481 80 ntBASIC1.44□□□□□ -2.18
BRPF3Q9ULD4 AC093729.1-201ENST00000513074 128 ntBASIC1.44□□□□□ -2.18
BRPF3Q9ULD4 RNU7-153P-201ENST00000516455 62 ntBASIC1.44□□□□□ -2.18
BRPF3Q9ULD4 AC025627.3-201ENST00000582078 182 ntBASIC1.44□□□□□ -2.18
BRPF3Q9ULD4 Y_RNA.219-201ENST00000364232 113 ntBASIC1.43□□□□□ -2.18
BRPF3Q9ULD4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
BRPF3Q9ULD4 RNA5SP255-201ENST00000516370 107 ntBASIC1.43□□□□□ -2.18
BRPF3Q9ULD4 AL353770.2-201ENST00000620024 78 ntBASIC1.43□□□□□ -2.18
BRPF3Q9ULD4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
BRPF3Q9ULD4 RNU6-132P-201ENST00000383863 107 ntBASIC1.42□□□□□ -2.18
BRPF3Q9ULD4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.42□□□□□ -2.18
BRPF3Q9ULD4 MIR3064-201ENST00000581130 66 ntBASIC1.42□□□□□ -2.18
BRPF3Q9ULD4 MIRLET7F1-201ENST00000362202 87 ntBASIC1.41□□□□□ -2.18
BRPF3Q9ULD4 MIR548U-201ENST00000390728 81 ntBASIC1.41□□□□□ -2.18
BRPF3Q9ULD4 RNU6-1265P-201ENST00000516342 103 ntBASIC1.41□□□□□ -2.18
BRPF3Q9ULD4 AC104996.3-201ENST00000590718 94 ntBASIC1.41□□□□□ -2.18
BRPF3Q9ULD4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
BRPF3Q9ULD4 MIR573-201ENST00000384964 99 ntBASIC1.4□□□□□ -2.19
BRPF3Q9ULD4 RNA5SP292-201ENST00000390974 118 ntBASIC1.4□□□□□ -2.19
BRPF3Q9ULD4 Y_RNA.607-201ENST00000410597 98 ntBASIC1.4□□□□□ -2.19
BRPF3Q9ULD4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.4□□□□□ -2.19
BRPF3Q9ULD4 U6.100-201ENST00000636230 99 ntBASIC1.4□□□□□ -2.19
BRPF3Q9ULD4 SNORD115-24-201ENST00000363528 82 ntBASIC1.39□□□□□ -2.19
BRPF3Q9ULD4 MIR518E-201ENST00000385252 88 ntBASIC1.39□□□□□ -2.19
BRPF3Q9ULD4 MIR644A-201ENST00000385262 94 ntBASIC1.39□□□□□ -2.19
BRPF3Q9ULD4 MIR3202-2-201ENST00000635980 79 ntBASIC1.39□□□□□ -2.19
BRPF3Q9ULD4 SNORA18.5-201ENST00000516616 101 ntBASIC1.38□□□□□ -2.19
BRPF3Q9ULD4 MIR4796-201ENST00000580742 81 ntBASIC1.38□□□□□ -2.19
BRPF3Q9ULD4 SNORD101-201ENST00000384027 73 ntBASIC1.37□□□□□ -2.19
BRPF3Q9ULD4 Y_RNA.437-201ENST00000384113 113 ntBASIC1.37□□□□□ -2.19
BRPF3Q9ULD4 Y_RNA.491-201ENST00000384417 107 ntBASIC1.37□□□□□ -2.19
BRPF3Q9ULD4 SNORD78.1-201ENST00000390866 65 ntBASIC1.37□□□□□ -2.19
BRPF3Q9ULD4 Y_RNA.596-201ENST00000410462 109 ntBASIC1.37□□□□□ -2.19
BRPF3Q9ULD4 RNU6-469P-201ENST00000516253 101 ntBASIC1.37□□□□□ -2.19
BRPF3Q9ULD4 SNORA25.13-201ENST00000516395 103 ntBASIC1.37□□□□□ -2.19
BRPF3Q9ULD4 AC140658.3-201ENST00000567603 271 ntBASIC1.37□□□□□ -2.19
BRPF3Q9ULD4 MIR4666B-201ENST00000578142 81 ntBASIC1.37□□□□□ -2.19
BRPF3Q9ULD4 MIR3612-201ENST00000579753 87 ntBASIC1.37□□□□□ -2.19
BRPF3Q9ULD4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.37□□□□□ -2.19
BRPF3Q9ULD4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
BRPF3Q9ULD4 RNU6-664P-201ENST00000362381 107 ntBASIC1.36□□□□□ -2.19
BRPF3Q9ULD4 RNU6-787P-201ENST00000384032 107 ntBASIC1.36□□□□□ -2.19
BRPF3Q9ULD4 RNU6-1124P-201ENST00000384169 107 ntBASIC1.36□□□□□ -2.19
BRPF3Q9ULD4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
BRPF3Q9ULD4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.36□□□□□ -2.19
BRPF3Q9ULD4 RNU6-135P-201ENST00000516769 101 ntBASIC1.36□□□□□ -2.19
BRPF3Q9ULD4 MIR4696-201ENST00000581431 70 ntBASIC1.36□□□□□ -2.19
BRPF3Q9ULD4 MTRNR2L2-201ENST00000604882 87 ntBASIC1.36□□□□□ -2.19
BRPF3Q9ULD4 snoU13.31-201ENST00000607291 104 ntBASIC1.36□□□□□ -2.19
BRPF3Q9ULD4 RNA5SP403-201ENST00000363598 108 ntBASIC1.35□□□□□ -2.19
BRPF3Q9ULD4 Y_RNA.239-201ENST00000364444 113 ntBASIC1.35□□□□□ -2.19
BRPF3Q9ULD4 Y_RNA.338-201ENST00000365320 114 ntBASIC1.35□□□□□ -2.19
BRPF3Q9ULD4 SNORD99-201ENST00000408612 74 ntBASIC1.35□□□□□ -2.19
BRPF3Q9ULD4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.35□□□□□ -2.19
BRPF3Q9ULD4 RNU6-228P-201ENST00000362700 106 ntBASIC1.34□□□□□ -2.19
BRPF3Q9ULD4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
BRPF3Q9ULD4 RNU7-161P-201ENST00000517289 62 ntBASIC1.34□□□□□ -2.19
BRPF3Q9ULD4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
BRPF3Q9ULD4 RNU6-1187P-201ENST00000364771 110 ntBASIC1.33□□□□□ -2.2
BRPF3Q9ULD4 AC011195.1-201ENST00000578177 177 ntBASIC1.33□□□□□ -2.2
BRPF3Q9ULD4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.33□□□□□ -2.2
BRPF3Q9ULD4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.33□□□□□ -2.2
BRPF3Q9ULD4 RNU7-104P-201ENST00000459398 79 ntBASIC1.32□□□□□ -2.2
BRPF3Q9ULD4 RNU7-13P-201ENST00000516413 62 ntBASIC1.32□□□□□ -2.2
BRPF3Q9ULD4 MIR3678-201ENST00000578455 94 ntBASIC1.32□□□□□ -2.2
BRPF3Q9ULD4 Y_RNA.313-201ENST00000365095 103 ntBASIC1.31□□□□□ -2.2
BRPF3Q9ULD4 RNU6-652P-201ENST00000365488 107 ntBASIC1.31□□□□□ -2.2
BRPF3Q9ULD4 MIR4498-201ENST00000577599 66 ntBASIC1.31□□□□□ -2.2
BRPF3Q9ULD4 MIR4639-201ENST00000584938 69 ntBASIC1.31□□□□□ -2.2
BRPF3Q9ULD4 Y_RNA.316-201ENST00000365118 111 ntBASIC1.3□□□□□ -2.2
BRPF3Q9ULD4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.3□□□□□ -2.2
BRPF3Q9ULD4 SNORD115-44-201ENST00000365391 82 ntBASIC1.3□□□□□ -2.2
BRPF3Q9ULD4 SNORD28-201ENST00000384706 75 ntBASIC1.3□□□□□ -2.2
BRPF3Q9ULD4 MIR1255A-201ENST00000408338 113 ntBASIC1.3□□□□□ -2.2
BRPF3Q9ULD4 AC244098.3-201ENST00000424803 96 ntBASIC1.3□□□□□ -2.2
BRPF3Q9ULD4 Y_RNA.685-201ENST00000516532 108 ntBASIC1.3□□□□□ -2.2
BRPF3Q9ULD4 SNORD18A-201ENST00000363753 72 ntBASIC1.29□□□□□ -2.2
BRPF3Q9ULD4 Y_RNA.207-201ENST00000364142 106 ntBASIC1.29□□□□□ -2.2
BRPF3Q9ULD4 RNU6-1229P-201ENST00000364295 107 ntBASIC1.29□□□□□ -2.2
BRPF3Q9ULD4 AC244669.1-204ENST00000621564 178 ntBASIC1.29□□□□□ -2.2
BRPF3Q9ULD4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.28□□□□□ -2.2
BRPF3Q9ULD4 RNU6-1275P-201ENST00000391087 107 ntBASIC1.28□□□□□ -2.2
BRPF3Q9ULD4 RNU6-935P-201ENST00000410371 100 ntBASIC1.28□□□□□ -2.2
BRPF3Q9ULD4 RNU6-287P-201ENST00000516230 98 ntBASIC1.28□□□□□ -2.2
BRPF3Q9ULD4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
BRPF3Q9ULD4 RPL39P28-201ENST00000465655 155 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 197.7 ms