Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.29□□□□□ -2.62
VAPAQ9P0L0 SNORD27-201ENST00000363981 72 ntBASIC-1.29□□□□□ -2.62
VAPAQ9P0L0 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.29□□□□□ -2.62
VAPAQ9P0L0 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.29□□□□□ -2.62
VAPAQ9P0L0 RNU6-588P-201ENST00000410281 105 ntBASIC-1.29□□□□□ -2.62
VAPAQ9P0L0 SNORD2-201ENST00000459163 69 ntBASIC-1.29□□□□□ -2.62
VAPAQ9P0L0 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.3□□□□□ -2.62
VAPAQ9P0L0 RNU6-243P-201ENST00000391140 107 ntBASIC-1.3□□□□□ -2.62
VAPAQ9P0L0 MTND3P22-201ENST00000510932 243 ntBASIC-1.3□□□□□ -2.62
VAPAQ9P0L0 RNA5SP67-201ENST00000516422 131 ntBASIC-1.3□□□□□ -2.62
VAPAQ9P0L0 AP002392.1-201ENST00000537692 208 ntBASIC-1.3□□□□□ -2.62
VAPAQ9P0L0 MIR3165-201ENST00000579874 75 ntBASIC-1.3□□□□□ -2.62
VAPAQ9P0L0 MIR4464-201ENST00000580818 92 ntBASIC-1.3□□□□□ -2.62
VAPAQ9P0L0 MIR4696-201ENST00000581431 70 ntBASIC-1.3□□□□□ -2.62
VAPAQ9P0L0 RNU6-208P-201ENST00000362431 107 ntBASIC-1.31□□□□□ -2.62
VAPAQ9P0L0 RNA5SP192-201ENST00000364404 120 ntBASIC-1.31□□□□□ -2.62
VAPAQ9P0L0 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.31□□□□□ -2.62
VAPAQ9P0L0 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.31□□□□□ -2.62
VAPAQ9P0L0 MTATP6P21-201ENST00000440681 189 ntBASIC-1.31□□□□□ -2.62
VAPAQ9P0L0 MIR3115-201ENST00000577915 68 ntBASIC-1.31□□□□□ -2.62
VAPAQ9P0L0 AC090617.8-201ENST00000623339 167 ntBASIC-1.31□□□□□ -2.62
VAPAQ9P0L0 SNORD101-201ENST00000384027 73 ntBASIC-1.32□□□□□ -2.62
VAPAQ9P0L0 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.32□□□□□ -2.62
VAPAQ9P0L0 RNY3P16-201ENST00000516338 101 ntBASIC-1.32□□□□□ -2.62
VAPAQ9P0L0 RNU6-479P-201ENST00000516348 105 ntBASIC-1.32□□□□□ -2.62
VAPAQ9P0L0 RNU6-706P-201ENST00000517229 104 ntBASIC-1.32□□□□□ -2.62
VAPAQ9P0L0 RNU6-664P-201ENST00000362381 107 ntBASIC-1.33□□□□□ -2.62
VAPAQ9P0L0 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.33□□□□□ -2.62
VAPAQ9P0L0 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.33□□□□□ -2.62
VAPAQ9P0L0 RNU6-746P-201ENST00000384112 109 ntBASIC-1.33□□□□□ -2.62
VAPAQ9P0L0 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.33□□□□□ -2.62
VAPAQ9P0L0 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.33□□□□□ -2.62
VAPAQ9P0L0 RNU6-719P-201ENST00000516671 104 ntBASIC-1.33□□□□□ -2.62
VAPAQ9P0L0 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.33□□□□□ -2.62
VAPAQ9P0L0 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.34□□□□□ -2.62
VAPAQ9P0L0 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.34□□□□□ -2.62
VAPAQ9P0L0 SNORD38.2-201ENST00000384470 69 ntBASIC-1.34□□□□□ -2.62
VAPAQ9P0L0 RNU6-493P-201ENST00000391321 108 ntBASIC-1.34□□□□□ -2.62
VAPAQ9P0L0 MIR889-201ENST00000401280 79 ntBASIC-1.34□□□□□ -2.62
VAPAQ9P0L0 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.34□□□□□ -2.62
VAPAQ9P0L0 MIR6888-201ENST00000621977 67 ntBASIC-1.34□□□□□ -2.62
VAPAQ9P0L0 AC132825.6-201ENST00000638861 357 ntBASIC-1.34□□□□□ -2.62
VAPAQ9P0L0 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.35□□□□□ -2.63
VAPAQ9P0L0 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.35□□□□□ -2.63
VAPAQ9P0L0 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.35□□□□□ -2.63
VAPAQ9P0L0 RNU6-474P-201ENST00000384243 107 ntBASIC-1.35□□□□□ -2.63
VAPAQ9P0L0 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.35□□□□□ -2.63
VAPAQ9P0L0 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.35□□□□□ -2.63
VAPAQ9P0L0 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.35□□□□□ -2.63
VAPAQ9P0L0 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.35□□□□□ -2.63
VAPAQ9P0L0 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.36□□□□□ -2.63
VAPAQ9P0L0 RNU6-647P-201ENST00000364243 107 ntBASIC-1.36□□□□□ -2.63
VAPAQ9P0L0 RNU6-818P-201ENST00000364837 108 ntBASIC-1.36□□□□□ -2.63
VAPAQ9P0L0 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.36□□□□□ -2.63
VAPAQ9P0L0 Y_RNA.505-201ENST00000384489 102 ntBASIC-1.36□□□□□ -2.63
VAPAQ9P0L0 MIR451A-201ENST00000385059 72 ntBASIC-1.36□□□□□ -2.63
VAPAQ9P0L0 SNORD63.1-201ENST00000516178 80 ntBASIC-1.36□□□□□ -2.63
VAPAQ9P0L0 MIR335-201ENST00000362173 94 ntBASIC-1.37□□□□□ -2.63
VAPAQ9P0L0 RNU6-990P-201ENST00000364385 104 ntBASIC-1.37□□□□□ -2.63
VAPAQ9P0L0 Y_RNA.292-201ENST00000364904 97 ntBASIC-1.37□□□□□ -2.63
VAPAQ9P0L0 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.37□□□□□ -2.63
VAPAQ9P0L0 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.37□□□□□ -2.63
VAPAQ9P0L0 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-1.37□□□□□ -2.63
VAPAQ9P0L0 AL445584.3-201ENST00000617173 78 ntBASIC-1.37□□□□□ -2.63
VAPAQ9P0L0 RNU6-235P-201ENST00000362644 107 ntBASIC-1.38□□□□□ -2.63
VAPAQ9P0L0 RNU6-508P-201ENST00000363231 103 ntBASIC-1.38□□□□□ -2.63
VAPAQ9P0L0 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.38□□□□□ -2.63
VAPAQ9P0L0 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.38□□□□□ -2.63
VAPAQ9P0L0 SNORD114-4-201ENST00000363962 75 ntBASIC-1.38□□□□□ -2.63
VAPAQ9P0L0 SNORA63.6-201ENST00000364921 119 ntBASIC-1.38□□□□□ -2.63
VAPAQ9P0L0 RNU6-768P-201ENST00000384683 107 ntBASIC-1.38□□□□□ -2.63
VAPAQ9P0L0 HLA-S-202ENST00000425174 53 ntBASIC-1.38□□□□□ -2.63
VAPAQ9P0L0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.38□□□□□ -2.63
VAPAQ9P0L0 RNU6-521P-201ENST00000516663 105 ntBASIC-1.38□□□□□ -2.63
VAPAQ9P0L0 MIR4643-201ENST00000577473 78 ntBASIC-1.38□□□□□ -2.63
VAPAQ9P0L0 MIR4308-201ENST00000580634 81 ntBASIC-1.38□□□□□ -2.63
VAPAQ9P0L0 AL353803.5-201ENST00000599815 141 ntBASIC-1.38□□□□□ -2.63
VAPAQ9P0L0 MIR6818-201ENST00000621576 65 ntBASIC-1.38□□□□□ -2.63
VAPAQ9P0L0 SNORA62.4-201ENST00000365504 151 ntBASIC-1.39□□□□□ -2.63
VAPAQ9P0L0 MIR527-201ENST00000385244 85 ntBASIC-1.39□□□□□ -2.63
VAPAQ9P0L0 RNU6-935P-201ENST00000410371 100 ntBASIC-1.39□□□□□ -2.63
VAPAQ9P0L0 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.39□□□□□ -2.63
VAPAQ9P0L0 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.4□□□□□ -2.63
VAPAQ9P0L0 RNU6-275P-201ENST00000364910 107 ntBASIC-1.4□□□□□ -2.63
VAPAQ9P0L0 RNY4P20-201ENST00000516678 93 ntBASIC-1.4□□□□□ -2.63
VAPAQ9P0L0 MIR4680-201ENST00000580906 66 ntBASIC-1.4□□□□□ -2.63
VAPAQ9P0L0 YWHAEP3-201ENST00000582767 121 ntBASIC-1.4□□□□□ -2.63
VAPAQ9P0L0 RNU6-713P-201ENST00000384761 107 ntBASIC-1.41□□□□□ -2.64
VAPAQ9P0L0 MIR216B-201ENST00000390186 82 ntBASIC-1.41□□□□□ -2.64
VAPAQ9P0L0 RNA5SP266-201ENST00000410273 108 ntBASIC-1.41□□□□□ -2.64
VAPAQ9P0L0 RNU4-61P-201ENST00000411243 107 ntBASIC-1.41□□□□□ -2.64
VAPAQ9P0L0 MTND5P20-201ENST00000448677 143 ntBASIC-1.41□□□□□ -2.64
VAPAQ9P0L0 MIR4520-1-201ENST00000582609 70 ntBASIC-1.41□□□□□ -2.64
VAPAQ9P0L0 MIR6129-201ENST00000616087 109 ntBASIC-1.41□□□□□ -2.64
VAPAQ9P0L0 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.42□□□□□ -2.64
VAPAQ9P0L0 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.42□□□□□ -2.64
VAPAQ9P0L0 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.42□□□□□ -2.64
VAPAQ9P0L0 FGF7P7-201ENST00000514120 227 ntBASIC-1.42□□□□□ -2.64
VAPAQ9P0L0 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.42□□□□□ -2.64
VAPAQ9P0L0 Y_RNA.702-201ENST00000516843 96 ntBASIC-1.42□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms