Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 MIR216A-201ENST00000385063 110 ntBASIC0.51□□□□□ -2.33
DDX56Q9NY93 RNU6-243P-201ENST00000391140 107 ntBASIC0.51□□□□□ -2.33
DDX56Q9NY93 MIR548L-201ENST00000408303 86 ntBASIC0.51□□□□□ -2.33
DDX56Q9NY93 AC069271.1-201ENST00000445577 156 ntBASIC0.51□□□□□ -2.33
DDX56Q9NY93 RNU6-589P-201ENST00000516485 107 ntBASIC0.51□□□□□ -2.33
DDX56Q9NY93 AC067863.3-201ENST00000624172 122 ntBASIC0.51□□□□□ -2.33
DDX56Q9NY93 SNORD36A-201ENST00000362874 73 ntBASIC0.5□□□□□ -2.33
DDX56Q9NY93 SNORD44.1-201ENST00000363202 61 ntBASIC0.5□□□□□ -2.33
DDX56Q9NY93 SNORA19.1-201ENST00000410656 129 ntBASIC0.5□□□□□ -2.33
DDX56Q9NY93 RNU6-1290P-201ENST00000362957 109 ntBASIC0.49□□□□□ -2.33
DDX56Q9NY93 RNU4-36P-201ENST00000364294 144 ntBASIC0.49□□□□□ -2.33
DDX56Q9NY93 MIR181B2-201ENST00000385004 89 ntBASIC0.49□□□□□ -2.33
DDX56Q9NY93 RNU6-229P-201ENST00000516614 102 ntBASIC0.49□□□□□ -2.33
DDX56Q9NY93 RNA5SP499-201ENST00000363982 119 ntBASIC0.48□□□□□ -2.33
DDX56Q9NY93 MIR598-201ENST00000384868 97 ntBASIC0.48□□□□□ -2.33
DDX56Q9NY93 RNU2-59P-201ENST00000410482 191 ntBASIC0.48□□□□□ -2.33
DDX56Q9NY93 MIR6513-201ENST00000621188 64 ntBASIC0.48□□□□□ -2.33
DDX56Q9NY93 MIR103A1-201ENST00000362165 78 ntBASIC0.47□□□□□ -2.33
DDX56Q9NY93 RNU6-1125P-201ENST00000363601 107 ntBASIC0.47□□□□□ -2.33
DDX56Q9NY93 SNORD45B-201ENST00000364617 72 ntBASIC0.47□□□□□ -2.33
DDX56Q9NY93 RNU6-1325P-201ENST00000364905 105 ntBASIC0.47□□□□□ -2.33
DDX56Q9NY93 RNU6-480P-201ENST00000384332 107 ntBASIC0.47□□□□□ -2.33
DDX56Q9NY93 MIR489-201ENST00000384923 84 ntBASIC0.47□□□□□ -2.33
DDX56Q9NY93 MIR1302-5-201ENST00000408164 150 ntBASIC0.47□□□□□ -2.33
DDX56Q9NY93 Y_RNA.601-201ENST00000410500 113 ntBASIC0.47□□□□□ -2.33
DDX56Q9NY93 Y_RNA.709-201ENST00000516952 92 ntBASIC0.47□□□□□ -2.33
DDX56Q9NY93 MIR5087-201ENST00000635826 76 ntBASIC0.47□□□□□ -2.33
DDX56Q9NY93 Y_RNA.10-201ENST00000362371 110 ntBASIC0.46□□□□□ -2.34
DDX56Q9NY93 RNU6-1244P-201ENST00000363614 108 ntBASIC0.46□□□□□ -2.34
DDX56Q9NY93 RNU6-1327P-201ENST00000365302 105 ntBASIC0.46□□□□□ -2.34
DDX56Q9NY93 RNU6-106P-201ENST00000384405 107 ntBASIC0.46□□□□□ -2.34
DDX56Q9NY93 Y_RNA.629-201ENST00000411368 105 ntBASIC0.46□□□□□ -2.34
DDX56Q9NY93 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
DDX56Q9NY93 AL161932.1-201ENST00000437408 146 ntBASIC0.46□□□□□ -2.34
DDX56Q9NY93 Y_RNA.95-201ENST00000363079 95 ntBASIC0.45□□□□□ -2.34
DDX56Q9NY93 RNU6-1126P-201ENST00000384002 107 ntBASIC0.45□□□□□ -2.34
DDX56Q9NY93 RNU6-904P-201ENST00000516206 101 ntBASIC0.45□□□□□ -2.34
DDX56Q9NY93 RNU6-795P-201ENST00000516323 103 ntBASIC0.45□□□□□ -2.34
DDX56Q9NY93 MIR548AI-201ENST00000579940 88 ntBASIC0.45□□□□□ -2.34
DDX56Q9NY93 MIR548Z-201ENST00000584743 97 ntBASIC0.45□□□□□ -2.34
DDX56Q9NY93 Y_RNA.78-201ENST00000362970 110 ntBASIC0.44□□□□□ -2.34
DDX56Q9NY93 Y_RNA.467-201ENST00000384297 102 ntBASIC0.44□□□□□ -2.34
DDX56Q9NY93 SNORD41.1-201ENST00000391000 69 ntBASIC0.44□□□□□ -2.34
DDX56Q9NY93 RNU6-554P-201ENST00000410466 106 ntBASIC0.44□□□□□ -2.34
DDX56Q9NY93 RNU7-13P-201ENST00000516413 62 ntBASIC0.44□□□□□ -2.34
DDX56Q9NY93 MIR4752-201ENST00000579672 72 ntBASIC0.44□□□□□ -2.34
DDX56Q9NY93 MIR4439-201ENST00000583746 80 ntBASIC0.44□□□□□ -2.34
DDX56Q9NY93 uc_338.28-201ENST00000612082 187 ntBASIC0.44□□□□□ -2.34
DDX56Q9NY93 Y_RNA.291-201ENST00000364886 113 ntBASIC0.43□□□□□ -2.34
DDX56Q9NY93 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
DDX56Q9NY93 SCARNA23-201ENST00000516060 130 ntBASIC0.43□□□□□ -2.34
DDX56Q9NY93 RNU6-1265P-201ENST00000516342 103 ntBASIC0.43□□□□□ -2.34
DDX56Q9NY93 MIR3920-201ENST00000581751 86 ntBASIC0.43□□□□□ -2.34
DDX56Q9NY93 AC012531.4-201ENST00000616509 177 ntBASIC0.43□□□□□ -2.34
DDX56Q9NY93 AC025521.1-201ENST00000621624 286 ntBASIC0.43□□□□□ -2.34
DDX56Q9NY93 TRDV1-202ENST00000621643 102 ntBASIC0.43□□□□□ -2.34
DDX56Q9NY93 RNU6-957P-201ENST00000363652 99 ntBASIC0.42□□□□□ -2.34
DDX56Q9NY93 Y_RNA.423-201ENST00000384057 113 ntBASIC0.42□□□□□ -2.34
DDX56Q9NY93 MIR590-201ENST00000385008 97 ntBASIC0.42□□□□□ -2.34
DDX56Q9NY93 RNU6-269P-201ENST00000391077 97 ntBASIC0.42□□□□□ -2.34
DDX56Q9NY93 RNY4P18-201ENST00000391107 89 ntBASIC0.42□□□□□ -2.34
DDX56Q9NY93 RNA5SP134-201ENST00000516492 96 ntBASIC0.42□□□□□ -2.34
DDX56Q9NY93 MIR4777-201ENST00000583710 86 ntBASIC0.42□□□□□ -2.34
DDX56Q9NY93 MIR7111-201ENST00000619751 72 ntBASIC0.42□□□□□ -2.34
DDX56Q9NY93 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.42□□□□□ -2.34
DDX56Q9NY93 SNORA51.5-201ENST00000384126 131 ntBASIC0.41□□□□□ -2.34
DDX56Q9NY93 RNU6-813P-201ENST00000384691 107 ntBASIC0.41□□□□□ -2.34
DDX56Q9NY93 MIR936-201ENST00000401264 98 ntBASIC0.41□□□□□ -2.34
DDX56Q9NY93 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.41□□□□□ -2.34
DDX56Q9NY93 AC103810.7-201ENST00000607821 91 ntBASIC0.41□□□□□ -2.34
DDX56Q9NY93 MIR6755-201ENST00000619993 66 ntBASIC0.41□□□□□ -2.34
DDX56Q9NY93 AC243829.3-201ENST00000622177 108 ntBASIC0.41□□□□□ -2.34
DDX56Q9NY93 AL162376.1-201ENST00000624117 175 ntBASIC0.41□□□□□ -2.34
DDX56Q9NY93 snoU13.11-201ENST00000459219 104 ntBASIC0.4□□□□□ -2.35
DDX56Q9NY93 RNU6-848P-201ENST00000515948 107 ntBASIC0.4□□□□□ -2.35
DDX56Q9NY93 RNU6-617P-201ENST00000516147 107 ntBASIC0.4□□□□□ -2.35
DDX56Q9NY93 RNU6-473P-201ENST00000516164 107 ntBASIC0.4□□□□□ -2.35
DDX56Q9NY93 RNU6-1049P-201ENST00000516414 107 ntBASIC0.4□□□□□ -2.35
DDX56Q9NY93 RNA5SP62-201ENST00000363457 110 ntBASIC0.39□□□□□ -2.35
DDX56Q9NY93 RNU6-756P-201ENST00000383997 107 ntBASIC0.39□□□□□ -2.35
DDX56Q9NY93 SNORD20-201ENST00000384550 80 ntBASIC0.39□□□□□ -2.35
DDX56Q9NY93 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.39□□□□□ -2.35
DDX56Q9NY93 RNA5SP436-201ENST00000516020 115 ntBASIC0.39□□□□□ -2.35
DDX56Q9NY93 RNU6-537P-201ENST00000517277 103 ntBASIC0.39□□□□□ -2.35
DDX56Q9NY93 AL513043.2-201ENST00000573941 143 ntBASIC0.39□□□□□ -2.35
DDX56Q9NY93 MIR4711-201ENST00000578274 70 ntBASIC0.39□□□□□ -2.35
DDX56Q9NY93 PVT1_3.1-201ENST00000620853 95 ntBASIC0.39□□□□□ -2.35
DDX56Q9NY93 RNU6-1113P-201ENST00000384348 107 ntBASIC0.38□□□□□ -2.35
DDX56Q9NY93 RNU6-109P-201ENST00000516364 107 ntBASIC0.38□□□□□ -2.35
DDX56Q9NY93 RNU6-184P-201ENST00000516514 107 ntBASIC0.38□□□□□ -2.35
DDX56Q9NY93 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.38□□□□□ -2.35
DDX56Q9NY93 RNU6-466P-201ENST00000391224 103 ntBASIC0.37□□□□□ -2.35
DDX56Q9NY93 U6.100-201ENST00000636230 99 ntBASIC0.37□□□□□ -2.35
DDX56Q9NY93 RNU6-815P-201ENST00000384080 113 ntBASIC0.36□□□□□ -2.35
DDX56Q9NY93 AC073261.1-201ENST00000429409 121 ntBASIC0.36□□□□□ -2.35
DDX56Q9NY93 MIR548AG2-201ENST00000581228 64 ntBASIC0.36□□□□□ -2.35
DDX56Q9NY93 RNU1-29P-201ENST00000606574 126 ntBASIC0.36□□□□□ -2.35
DDX56Q9NY93 AC243829.6-201ENST00000612652 106 ntBASIC0.36□□□□□ -2.35
DDX56Q9NY93 SNORA70.25-201ENST00000612741 95 ntBASIC0.36□□□□□ -2.35
DDX56Q9NY93 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 243.6 ms