Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 MIR216A-201ENST00000385063 110 ntBASIC0.51□□□□□ -2.33
DDX56Q9NY93 RNU6-243P-201ENST00000391140 107 ntBASIC0.51□□□□□ -2.33
DDX56Q9NY93 MIR548L-201ENST00000408303 86 ntBASIC0.51□□□□□ -2.33
DDX56Q9NY93 AC069271.1-201ENST00000445577 156 ntBASIC0.51□□□□□ -2.33
DDX56Q9NY93 RNU6-589P-201ENST00000516485 107 ntBASIC0.51□□□□□ -2.33
DDX56Q9NY93 AC067863.3-201ENST00000624172 122 ntBASIC0.51□□□□□ -2.33
DDX56Q9NY93 SNORD36A-201ENST00000362874 73 ntBASIC0.5□□□□□ -2.33
DDX56Q9NY93 SNORD44.1-201ENST00000363202 61 ntBASIC0.5□□□□□ -2.33
DDX56Q9NY93 SNORA19.1-201ENST00000410656 129 ntBASIC0.5□□□□□ -2.33
DDX56Q9NY93 RNU6-1290P-201ENST00000362957 109 ntBASIC0.49□□□□□ -2.33
DDX56Q9NY93 RNU4-36P-201ENST00000364294 144 ntBASIC0.49□□□□□ -2.33
DDX56Q9NY93 MIR181B2-201ENST00000385004 89 ntBASIC0.49□□□□□ -2.33
DDX56Q9NY93 RNU6-229P-201ENST00000516614 102 ntBASIC0.49□□□□□ -2.33
DDX56Q9NY93 RNA5SP499-201ENST00000363982 119 ntBASIC0.48□□□□□ -2.33
DDX56Q9NY93 MIR598-201ENST00000384868 97 ntBASIC0.48□□□□□ -2.33
DDX56Q9NY93 RNU2-59P-201ENST00000410482 191 ntBASIC0.48□□□□□ -2.33
DDX56Q9NY93 MIR6513-201ENST00000621188 64 ntBASIC0.48□□□□□ -2.33
DDX56Q9NY93 MIR103A1-201ENST00000362165 78 ntBASIC0.47□□□□□ -2.33
DDX56Q9NY93 RNU6-1125P-201ENST00000363601 107 ntBASIC0.47□□□□□ -2.33
DDX56Q9NY93 SNORD45B-201ENST00000364617 72 ntBASIC0.47□□□□□ -2.33
DDX56Q9NY93 RNU6-1325P-201ENST00000364905 105 ntBASIC0.47□□□□□ -2.33
DDX56Q9NY93 RNU6-480P-201ENST00000384332 107 ntBASIC0.47□□□□□ -2.33
DDX56Q9NY93 MIR489-201ENST00000384923 84 ntBASIC0.47□□□□□ -2.33
DDX56Q9NY93 MIR1302-5-201ENST00000408164 150 ntBASIC0.47□□□□□ -2.33
DDX56Q9NY93 Y_RNA.601-201ENST00000410500 113 ntBASIC0.47□□□□□ -2.33
DDX56Q9NY93 Y_RNA.709-201ENST00000516952 92 ntBASIC0.47□□□□□ -2.33
DDX56Q9NY93 MIR5087-201ENST00000635826 76 ntBASIC0.47□□□□□ -2.33
DDX56Q9NY93 Y_RNA.10-201ENST00000362371 110 ntBASIC0.46□□□□□ -2.34
DDX56Q9NY93 RNU6-1244P-201ENST00000363614 108 ntBASIC0.46□□□□□ -2.34
DDX56Q9NY93 RNU6-1327P-201ENST00000365302 105 ntBASIC0.46□□□□□ -2.34
DDX56Q9NY93 RNU6-106P-201ENST00000384405 107 ntBASIC0.46□□□□□ -2.34
DDX56Q9NY93 Y_RNA.629-201ENST00000411368 105 ntBASIC0.46□□□□□ -2.34
DDX56Q9NY93 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
DDX56Q9NY93 AL161932.1-201ENST00000437408 146 ntBASIC0.46□□□□□ -2.34
DDX56Q9NY93 Y_RNA.95-201ENST00000363079 95 ntBASIC0.45□□□□□ -2.34
DDX56Q9NY93 RNU6-1126P-201ENST00000384002 107 ntBASIC0.45□□□□□ -2.34
DDX56Q9NY93 RNU6-904P-201ENST00000516206 101 ntBASIC0.45□□□□□ -2.34
DDX56Q9NY93 RNU6-795P-201ENST00000516323 103 ntBASIC0.45□□□□□ -2.34
DDX56Q9NY93 MIR548AI-201ENST00000579940 88 ntBASIC0.45□□□□□ -2.34
DDX56Q9NY93 MIR548Z-201ENST00000584743 97 ntBASIC0.45□□□□□ -2.34
DDX56Q9NY93 Y_RNA.78-201ENST00000362970 110 ntBASIC0.44□□□□□ -2.34
DDX56Q9NY93 Y_RNA.467-201ENST00000384297 102 ntBASIC0.44□□□□□ -2.34
DDX56Q9NY93 SNORD41.1-201ENST00000391000 69 ntBASIC0.44□□□□□ -2.34
DDX56Q9NY93 RNU6-554P-201ENST00000410466 106 ntBASIC0.44□□□□□ -2.34
DDX56Q9NY93 RNU7-13P-201ENST00000516413 62 ntBASIC0.44□□□□□ -2.34
DDX56Q9NY93 MIR4752-201ENST00000579672 72 ntBASIC0.44□□□□□ -2.34
DDX56Q9NY93 MIR4439-201ENST00000583746 80 ntBASIC0.44□□□□□ -2.34
DDX56Q9NY93 uc_338.28-201ENST00000612082 187 ntBASIC0.44□□□□□ -2.34
DDX56Q9NY93 Y_RNA.291-201ENST00000364886 113 ntBASIC0.43□□□□□ -2.34
DDX56Q9NY93 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
DDX56Q9NY93 SCARNA23-201ENST00000516060 130 ntBASIC0.43□□□□□ -2.34
DDX56Q9NY93 RNU6-1265P-201ENST00000516342 103 ntBASIC0.43□□□□□ -2.34
DDX56Q9NY93 MIR3920-201ENST00000581751 86 ntBASIC0.43□□□□□ -2.34
DDX56Q9NY93 AC012531.4-201ENST00000616509 177 ntBASIC0.43□□□□□ -2.34
DDX56Q9NY93 AC025521.1-201ENST00000621624 286 ntBASIC0.43□□□□□ -2.34
DDX56Q9NY93 TRDV1-202ENST00000621643 102 ntBASIC0.43□□□□□ -2.34
DDX56Q9NY93 RNU6-957P-201ENST00000363652 99 ntBASIC0.42□□□□□ -2.34
DDX56Q9NY93 Y_RNA.423-201ENST00000384057 113 ntBASIC0.42□□□□□ -2.34
DDX56Q9NY93 MIR590-201ENST00000385008 97 ntBASIC0.42□□□□□ -2.34
DDX56Q9NY93 RNU6-269P-201ENST00000391077 97 ntBASIC0.42□□□□□ -2.34
DDX56Q9NY93 RNY4P18-201ENST00000391107 89 ntBASIC0.42□□□□□ -2.34
DDX56Q9NY93 RNA5SP134-201ENST00000516492 96 ntBASIC0.42□□□□□ -2.34
DDX56Q9NY93 MIR4777-201ENST00000583710 86 ntBASIC0.42□□□□□ -2.34
DDX56Q9NY93 MIR7111-201ENST00000619751 72 ntBASIC0.42□□□□□ -2.34
DDX56Q9NY93 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.42□□□□□ -2.34
DDX56Q9NY93 SNORA51.5-201ENST00000384126 131 ntBASIC0.41□□□□□ -2.34
DDX56Q9NY93 RNU6-813P-201ENST00000384691 107 ntBASIC0.41□□□□□ -2.34
DDX56Q9NY93 MIR936-201ENST00000401264 98 ntBASIC0.41□□□□□ -2.34
DDX56Q9NY93 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.41□□□□□ -2.34
DDX56Q9NY93 AC103810.7-201ENST00000607821 91 ntBASIC0.41□□□□□ -2.34
DDX56Q9NY93 MIR6755-201ENST00000619993 66 ntBASIC0.41□□□□□ -2.34
DDX56Q9NY93 AC243829.3-201ENST00000622177 108 ntBASIC0.41□□□□□ -2.34
DDX56Q9NY93 AL162376.1-201ENST00000624117 175 ntBASIC0.41□□□□□ -2.34
DDX56Q9NY93 snoU13.11-201ENST00000459219 104 ntBASIC0.4□□□□□ -2.35
DDX56Q9NY93 RNU6-848P-201ENST00000515948 107 ntBASIC0.4□□□□□ -2.35
DDX56Q9NY93 RNU6-617P-201ENST00000516147 107 ntBASIC0.4□□□□□ -2.35
DDX56Q9NY93 RNU6-473P-201ENST00000516164 107 ntBASIC0.4□□□□□ -2.35
DDX56Q9NY93 RNU6-1049P-201ENST00000516414 107 ntBASIC0.4□□□□□ -2.35
DDX56Q9NY93 RNA5SP62-201ENST00000363457 110 ntBASIC0.39□□□□□ -2.35
DDX56Q9NY93 RNU6-756P-201ENST00000383997 107 ntBASIC0.39□□□□□ -2.35
DDX56Q9NY93 SNORD20-201ENST00000384550 80 ntBASIC0.39□□□□□ -2.35
DDX56Q9NY93 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.39□□□□□ -2.35
DDX56Q9NY93 RNA5SP436-201ENST00000516020 115 ntBASIC0.39□□□□□ -2.35
DDX56Q9NY93 RNU6-537P-201ENST00000517277 103 ntBASIC0.39□□□□□ -2.35
DDX56Q9NY93 AL513043.2-201ENST00000573941 143 ntBASIC0.39□□□□□ -2.35
DDX56Q9NY93 MIR4711-201ENST00000578274 70 ntBASIC0.39□□□□□ -2.35
DDX56Q9NY93 PVT1_3.1-201ENST00000620853 95 ntBASIC0.39□□□□□ -2.35
DDX56Q9NY93 RNU6-1113P-201ENST00000384348 107 ntBASIC0.38□□□□□ -2.35
DDX56Q9NY93 RNU6-109P-201ENST00000516364 107 ntBASIC0.38□□□□□ -2.35
DDX56Q9NY93 RNU6-184P-201ENST00000516514 107 ntBASIC0.38□□□□□ -2.35
DDX56Q9NY93 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.38□□□□□ -2.35
DDX56Q9NY93 RNU6-466P-201ENST00000391224 103 ntBASIC0.37□□□□□ -2.35
DDX56Q9NY93 U6.100-201ENST00000636230 99 ntBASIC0.37□□□□□ -2.35
DDX56Q9NY93 RNU6-815P-201ENST00000384080 113 ntBASIC0.36□□□□□ -2.35
DDX56Q9NY93 AC073261.1-201ENST00000429409 121 ntBASIC0.36□□□□□ -2.35
DDX56Q9NY93 MIR548AG2-201ENST00000581228 64 ntBASIC0.36□□□□□ -2.35
DDX56Q9NY93 RNU1-29P-201ENST00000606574 126 ntBASIC0.36□□□□□ -2.35
DDX56Q9NY93 AC243829.6-201ENST00000612652 106 ntBASIC0.36□□□□□ -2.35
DDX56Q9NY93 SNORA70.25-201ENST00000612741 95 ntBASIC0.36□□□□□ -2.35
DDX56Q9NY93 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 199.2 ms