Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 Y_RNA.178-201ENST00000363832 102 ntBASIC0.84□□□□□ -2.27
CCM2LQ9NUG4 RNU6-480P-201ENST00000384332 107 ntBASIC0.84□□□□□ -2.27
CCM2LQ9NUG4 MIR140-201ENST00000385282 100 ntBASIC0.84□□□□□ -2.27
CCM2LQ9NUG4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.84□□□□□ -2.27
CCM2LQ9NUG4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.84□□□□□ -2.27
CCM2LQ9NUG4 Y_RNA.96-201ENST00000363092 109 ntBASIC0.83□□□□□ -2.28
CCM2LQ9NUG4 Y_RNA.544-201ENST00000384650 113 ntBASIC0.83□□□□□ -2.28
CCM2LQ9NUG4 MIR516A2-201ENST00000384888 90 ntBASIC0.83□□□□□ -2.28
CCM2LQ9NUG4 MIR532-201ENST00000385025 91 ntBASIC0.83□□□□□ -2.28
CCM2LQ9NUG4 MIR516A1-201ENST00000385033 90 ntBASIC0.83□□□□□ -2.28
CCM2LQ9NUG4 MIR644A-201ENST00000385262 94 ntBASIC0.83□□□□□ -2.28
CCM2LQ9NUG4 RNU6-644P-201ENST00000391155 98 ntBASIC0.83□□□□□ -2.28
CCM2LQ9NUG4 RNU7-61P-201ENST00000515897 61 ntBASIC0.83□□□□□ -2.28
CCM2LQ9NUG4 MIR4639-201ENST00000584938 69 ntBASIC0.83□□□□□ -2.28
CCM2LQ9NUG4 RNU6-1244P-201ENST00000363614 108 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 MIR181B2-201ENST00000385004 89 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 MIR599-201ENST00000385069 95 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 RNA5SP89-201ENST00000410300 108 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 RNU7-195P-201ENST00000458793 62 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 RNU7-106P-201ENST00000459514 67 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 Y_RNA.809-201ENST00000516058 95 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 RNU6-168P-201ENST00000516189 101 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 RNU6-162P-201ENST00000516228 103 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 MIR4698-201ENST00000577795 80 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 AL590095.2-201ENST00000604136 117 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 AC103810.7-201ENST00000607821 91 ntBASIC0.82□□□□□ -2.28
CCM2LQ9NUG4 SNORD18A-201ENST00000363753 72 ntBASIC0.81□□□□□ -2.28
CCM2LQ9NUG4 RNY1P8-201ENST00000383970 114 ntBASIC0.81□□□□□ -2.28
CCM2LQ9NUG4 RNU6-1254P-201ENST00000391266 104 ntBASIC0.81□□□□□ -2.28
CCM2LQ9NUG4 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
CCM2LQ9NUG4 MIR4714-201ENST00000580728 77 ntBASIC0.81□□□□□ -2.28
CCM2LQ9NUG4 AP001318.4-201ENST00000616637 121 ntBASIC0.81□□□□□ -2.28
CCM2LQ9NUG4 RNU6-1260P-201ENST00000362944 107 ntBASIC0.8□□□□□ -2.28
CCM2LQ9NUG4 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
CCM2LQ9NUG4 RNU6-813P-201ENST00000384691 107 ntBASIC0.8□□□□□ -2.28
CCM2LQ9NUG4 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
CCM2LQ9NUG4 Y_RNA.677-201ENST00000516401 85 ntBASIC0.8□□□□□ -2.28
CCM2LQ9NUG4 AC025521.1-201ENST00000621624 286 ntBASIC0.8□□□□□ -2.28
CCM2LQ9NUG4 Y_RNA.93-201ENST00000363066 109 ntBASIC0.79□□□□□ -2.28
CCM2LQ9NUG4 SNORD115-24-201ENST00000363528 82 ntBASIC0.79□□□□□ -2.28
CCM2LQ9NUG4 RNA5SP457-201ENST00000363657 124 ntBASIC0.79□□□□□ -2.28
CCM2LQ9NUG4 Y_RNA.348-201ENST00000365403 103 ntBASIC0.79□□□□□ -2.28
CCM2LQ9NUG4 RNU6-243P-201ENST00000391140 107 ntBASIC0.79□□□□□ -2.28
CCM2LQ9NUG4 RNA5SP94-201ENST00000516917 108 ntBASIC0.79□□□□□ -2.28
CCM2LQ9NUG4 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.79□□□□□ -2.28
CCM2LQ9NUG4 Y_RNA.115-201ENST00000363272 98 ntBASIC0.78□□□□□ -2.28
CCM2LQ9NUG4 MTATP8P2-201ENST00000435212 202 ntBASIC0.78□□□□□ -2.28
CCM2LQ9NUG4 SNORA40.13-201ENST00000516379 120 ntBASIC0.78□□□□□ -2.28
CCM2LQ9NUG4 Y_RNA.221-201ENST00000364248 96 ntBASIC0.77□□□□□ -2.29
CCM2LQ9NUG4 SNORD28-201ENST00000384706 75 ntBASIC0.77□□□□□ -2.29
CCM2LQ9NUG4 Y_RNA.705-201ENST00000516862 110 ntBASIC0.77□□□□□ -2.29
CCM2LQ9NUG4 SCARNA16.5-201ENST00000517114 183 ntBASIC0.77□□□□□ -2.29
CCM2LQ9NUG4 MIR6513-201ENST00000621188 64 ntBASIC0.77□□□□□ -2.29
CCM2LQ9NUG4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CCM2LQ9NUG4 RNU6-640P-201ENST00000363693 105 ntBASIC0.76□□□□□ -2.29
CCM2LQ9NUG4 RNU6-905P-201ENST00000384434 107 ntBASIC0.76□□□□□ -2.29
CCM2LQ9NUG4 MTATP6P29-201ENST00000415057 132 ntBASIC0.76□□□□□ -2.29
CCM2LQ9NUG4 AL161932.1-201ENST00000437408 146 ntBASIC0.76□□□□□ -2.29
CCM2LQ9NUG4 RNU6-158P-201ENST00000517104 100 ntBASIC0.76□□□□□ -2.29
CCM2LQ9NUG4 RNA5SP47-201ENST00000517230 109 ntBASIC0.76□□□□□ -2.29
CCM2LQ9NUG4 AL513043.2-201ENST00000573941 143 ntBASIC0.76□□□□□ -2.29
CCM2LQ9NUG4 U7.3-201ENST00000616123 62 ntBASIC0.76□□□□□ -2.29
CCM2LQ9NUG4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CCM2LQ9NUG4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
CCM2LQ9NUG4 SNORD114-23-201ENST00000363536 72 ntBASIC0.75□□□□□ -2.29
CCM2LQ9NUG4 RNU6-887P-201ENST00000410660 100 ntBASIC0.75□□□□□ -2.29
CCM2LQ9NUG4 AL606490.4-201ENST00000423117 127 ntBASIC0.75□□□□□ -2.29
CCM2LQ9NUG4 AC092634.7-201ENST00000621022 103 ntBASIC0.75□□□□□ -2.29
CCM2LQ9NUG4 AC244669.1-204ENST00000621564 178 ntBASIC0.75□□□□□ -2.29
CCM2LQ9NUG4 SNORD36A-201ENST00000362874 73 ntBASIC0.74□□□□□ -2.29
CCM2LQ9NUG4 Y_RNA.68-201ENST00000362881 102 ntBASIC0.74□□□□□ -2.29
CCM2LQ9NUG4 RNU6-524P-201ENST00000384270 107 ntBASIC0.74□□□□□ -2.29
CCM2LQ9NUG4 RNU6-972P-201ENST00000391208 107 ntBASIC0.74□□□□□ -2.29
CCM2LQ9NUG4 MIR936-201ENST00000401264 98 ntBASIC0.74□□□□□ -2.29
CCM2LQ9NUG4 MIR924-201ENST00000638017 53 ntBASIC0.74□□□□□ -2.29
CCM2LQ9NUG4 RNA5SP403-201ENST00000363598 108 ntBASIC0.73□□□□□ -2.29
CCM2LQ9NUG4 Y_RNA.290-201ENST00000364879 114 ntBASIC0.73□□□□□ -2.29
CCM2LQ9NUG4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.73□□□□□ -2.29
CCM2LQ9NUG4 snoU13.11-201ENST00000459219 104 ntBASIC0.73□□□□□ -2.29
CCM2LQ9NUG4 RNU7-104P-201ENST00000459398 79 ntBASIC0.73□□□□□ -2.29
CCM2LQ9NUG4 MIR2052-201ENST00000636055 55 ntBASIC0.73□□□□□ -2.29
CCM2LQ9NUG4 AC010487.4-201ENST00000637027 61 ntBASIC0.73□□□□□ -2.29
CCM2LQ9NUG4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.73□□□□□ -2.29
CCM2LQ9NUG4 RNU6-957P-201ENST00000363652 99 ntBASIC0.72□□□□□ -2.29
CCM2LQ9NUG4 MIR488-201ENST00000365739 83 ntBASIC0.72□□□□□ -2.29
CCM2LQ9NUG4 RNU6-466P-201ENST00000391224 103 ntBASIC0.72□□□□□ -2.29
CCM2LQ9NUG4 RNY4P30-201ENST00000410216 95 ntBASIC0.72□□□□□ -2.29
CCM2LQ9NUG4 SNORD71-201ENST00000411292 86 ntBASIC0.72□□□□□ -2.29
CCM2LQ9NUG4 RNA5SP330-201ENST00000517096 96 ntBASIC0.72□□□□□ -2.29
CCM2LQ9NUG4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.72□□□□□ -2.29
CCM2LQ9NUG4 RNU7-161P-201ENST00000517289 62 ntBASIC0.72□□□□□ -2.29
CCM2LQ9NUG4 MIR6828-201ENST00000636181 60 ntBASIC0.72□□□□□ -2.29
CCM2LQ9NUG4 Y_RNA.190-201ENST00000363964 101 ntBASIC0.71□□□□□ -2.3
CCM2LQ9NUG4 SNORD58A-201ENST00000383875 65 ntBASIC0.71□□□□□ -2.3
CCM2LQ9NUG4 SNORA8.2-201ENST00000384372 139 ntBASIC0.71□□□□□ -2.3
CCM2LQ9NUG4 Y_RNA.681-201ENST00000516445 113 ntBASIC0.71□□□□□ -2.3
CCM2LQ9NUG4 MALAT1.1-201ENST00000618249 95 ntBASIC0.71□□□□□ -2.3
CCM2LQ9NUG4 RNU6-1131P-201ENST00000364955 107 ntBASIC0.7□□□□□ -2.3
CCM2LQ9NUG4 RNU6-945P-201ENST00000383947 107 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 377.1 ms