Protein–RNA interactions for Protein: Q9H9J4

USP42, Ubiquitin carboxyl-terminal hydrolase 42, humanhuman

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP42Q9H9J4 AC020661.2-201ENST00000560114 134 ntBASIC-0.85□□□□□ -2.54
USP42Q9H9J4 MIR3179-1-201ENST00000578940 84 ntBASIC-0.85□□□□□ -2.54
USP42Q9H9J4 MIR3179-2-201ENST00000579107 84 ntBASIC-0.85□□□□□ -2.54
USP42Q9H9J4 MIR3179-3-201ENST00000579566 84 ntBASIC-0.85□□□□□ -2.54
USP42Q9H9J4 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.85□□□□□ -2.54
USP42Q9H9J4 MIR3179-4-201ENST00000617599 84 ntBASIC-0.85□□□□□ -2.54
USP42Q9H9J4 MIR6738-201ENST00000619620 64 ntBASIC-0.85□□□□□ -2.54
USP42Q9H9J4 SNORD27-201ENST00000363981 72 ntBASIC-0.86□□□□□ -2.55
USP42Q9H9J4 RNU6-309P-201ENST00000364573 106 ntBASIC-0.86□□□□□ -2.55
USP42Q9H9J4 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.86□□□□□ -2.55
USP42Q9H9J4 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.86□□□□□ -2.55
USP42Q9H9J4 MIR518B-201ENST00000385127 83 ntBASIC-0.86□□□□□ -2.55
USP42Q9H9J4 RNU6-521P-201ENST00000516663 105 ntBASIC-0.86□□□□□ -2.55
USP42Q9H9J4 SNORA40.17-201ENST00000517256 115 ntBASIC-0.86□□□□□ -2.55
USP42Q9H9J4 MIR4499-201ENST00000584834 69 ntBASIC-0.86□□□□□ -2.55
USP42Q9H9J4 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.87□□□□□ -2.55
USP42Q9H9J4 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.87□□□□□ -2.55
USP42Q9H9J4 MT-TI-201ENST00000387365 69 ntBASIC-0.87□□□□□ -2.55
USP42Q9H9J4 RNU6-243P-201ENST00000391140 107 ntBASIC-0.87□□□□□ -2.55
USP42Q9H9J4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.87□□□□□ -2.55
USP42Q9H9J4 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.87□□□□□ -2.55
USP42Q9H9J4 AC108081.1-201ENST00000604358 221 ntBASIC-0.87□□□□□ -2.55
USP42Q9H9J4 MIR8062-201ENST00000621515 85 ntBASIC-0.87□□□□□ -2.55
USP42Q9H9J4 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.88□□□□□ -2.55
USP42Q9H9J4 RNU6-957P-201ENST00000363652 99 ntBASIC-0.88□□□□□ -2.55
USP42Q9H9J4 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.88□□□□□ -2.55
USP42Q9H9J4 RNU6-973P-201ENST00000364690 107 ntBASIC-0.88□□□□□ -2.55
USP42Q9H9J4 SNORD38.2-201ENST00000384470 69 ntBASIC-0.88□□□□□ -2.55
USP42Q9H9J4 RNU6-713P-201ENST00000384761 107 ntBASIC-0.88□□□□□ -2.55
USP42Q9H9J4 RNU6-588P-201ENST00000410281 105 ntBASIC-0.88□□□□□ -2.55
USP42Q9H9J4 SNORD22.1-201ENST00000516331 125 ntBASIC-0.88□□□□□ -2.55
USP42Q9H9J4 MIR5704-201ENST00000584029 77 ntBASIC-0.88□□□□□ -2.55
USP42Q9H9J4 MIR4723-201ENST00000585070 81 ntBASIC-0.88□□□□□ -2.55
USP42Q9H9J4 RNU6-10P-201ENST00000384036 107 ntBASIC-0.89□□□□□ -2.55
USP42Q9H9J4 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.89□□□□□ -2.55
USP42Q9H9J4 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.89□□□□□ -2.55
USP42Q9H9J4 MIR1302-6-201ENST00000408466 90 ntBASIC-0.89□□□□□ -2.55
USP42Q9H9J4 MIR548O2-201ENST00000616090 70 ntBASIC-0.89□□□□□ -2.55
USP42Q9H9J4 uc_338.19-201ENST00000616808 99 ntBASIC-0.89□□□□□ -2.55
USP42Q9H9J4 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.89□□□□□ -2.55
USP42Q9H9J4 MIR582-201ENST00000365731 98 ntBASIC-0.89□□□□□ -2.55
USP42Q9H9J4 MIR517B-201ENST00000385102 67 ntBASIC-0.89□□□□□ -2.55
USP42Q9H9J4 SNORA75.5-201ENST00000391291 81 ntBASIC-0.89□□□□□ -2.55
USP42Q9H9J4 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.89□□□□□ -2.55
USP42Q9H9J4 AC022028.1-201ENST00000412054 408 ntBASIC-0.89□□□□□ -2.55
USP42Q9H9J4 SCARNA18B-201ENST00000458806 135 ntBASIC-0.89□□□□□ -2.55
USP42Q9H9J4 AC097510.1-201ENST00000510945 133 ntBASIC-0.89□□□□□ -2.55
USP42Q9H9J4 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.89□□□□□ -2.55
USP42Q9H9J4 RNU7-6P-201ENST00000516845 62 ntBASIC-0.89□□□□□ -2.55
USP42Q9H9J4 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.89□□□□□ -2.55
USP42Q9H9J4 AL137067.1-201ENST00000615933 120 ntBASIC-0.89□□□□□ -2.55
USP42Q9H9J4 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.9□□□□□ -2.55
USP42Q9H9J4 SNORD115-19-201ENST00000363098 82 ntBASIC-0.9□□□□□ -2.55
USP42Q9H9J4 SNORD115-18-201ENST00000363293 82 ntBASIC-0.9□□□□□ -2.55
USP42Q9H9J4 RNU4-32P-201ENST00000363404 141 ntBASIC-0.9□□□□□ -2.55
USP42Q9H9J4 SNORD115-17-201ENST00000364612 82 ntBASIC-0.9□□□□□ -2.55
USP42Q9H9J4 RNU6-431P-201ENST00000383874 107 ntBASIC-0.9□□□□□ -2.55
USP42Q9H9J4 RNU6-476P-201ENST00000384726 107 ntBASIC-0.9□□□□□ -2.55
USP42Q9H9J4 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.9□□□□□ -2.55
USP42Q9H9J4 SNORD2-201ENST00000459163 69 ntBASIC-0.9□□□□□ -2.55
USP42Q9H9J4 AC022137.1-201ENST00000483735 151 ntBASIC-0.9□□□□□ -2.55
USP42Q9H9J4 RNU6-635P-201ENST00000516651 102 ntBASIC-0.9□□□□□ -2.55
USP42Q9H9J4 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.9□□□□□ -2.55
USP42Q9H9J4 MIR1255B1-201ENST00000636325 63 ntBASIC-0.9□□□□□ -2.55
USP42Q9H9J4 RNU6-238P-201ENST00000363313 106 ntBASIC-0.91□□□□□ -2.56
USP42Q9H9J4 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.91□□□□□ -2.56
USP42Q9H9J4 SNORD64-201ENST00000386683 67 ntBASIC-0.91□□□□□ -2.56
USP42Q9H9J4 MIR216B-201ENST00000390186 82 ntBASIC-0.91□□□□□ -2.56
USP42Q9H9J4 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.91□□□□□ -2.56
USP42Q9H9J4 AP000533.3-201ENST00000447704 118 ntBASIC-0.91□□□□□ -2.56
USP42Q9H9J4 SNORD127-201ENST00000458892 86 ntBASIC-0.91□□□□□ -2.56
USP42Q9H9J4 RNU6-274P-201ENST00000459566 107 ntBASIC-0.91□□□□□ -2.56
USP42Q9H9J4 MTATP8P1-201ENST00000467115 207 ntBASIC-0.91□□□□□ -2.56
USP42Q9H9J4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.91□□□□□ -2.56
USP42Q9H9J4 RNA5SP470-201ENST00000516463 106 ntBASIC-0.91□□□□□ -2.56
USP42Q9H9J4 RNU6-762P-201ENST00000517107 102 ntBASIC-0.91□□□□□ -2.56
USP42Q9H9J4 MIR378F-201ENST00000578143 78 ntBASIC-0.91□□□□□ -2.56
USP42Q9H9J4 MIR4696-201ENST00000581431 70 ntBASIC-0.91□□□□□ -2.56
USP42Q9H9J4 MIR6844-201ENST00000637122 62 ntBASIC-0.91□□□□□ -2.56
USP42Q9H9J4 MIR198-201ENST00000637333 62 ntBASIC-0.91□□□□□ -2.56
USP42Q9H9J4 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.92□□□□□ -2.56
USP42Q9H9J4 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.92□□□□□ -2.56
USP42Q9H9J4 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.92□□□□□ -2.56
USP42Q9H9J4 SNORA33.2-201ENST00000365413 134 ntBASIC-0.92□□□□□ -2.56
USP42Q9H9J4 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.92□□□□□ -2.56
USP42Q9H9J4 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.92□□□□□ -2.56
USP42Q9H9J4 MIR147A-201ENST00000385079 72 ntBASIC-0.92□□□□□ -2.56
USP42Q9H9J4 MIR548E-201ENST00000408287 88 ntBASIC-0.92□□□□□ -2.56
USP42Q9H9J4 MTND2P23-201ENST00000422990 651 ntBASIC-0.92□□□□□ -2.56
USP42Q9H9J4 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.92□□□□□ -2.56
USP42Q9H9J4 MIR6854-201ENST00000614935 69 ntBASIC-0.92□□□□□ -2.56
USP42Q9H9J4 MIR8068-201ENST00000618032 68 ntBASIC-0.92□□□□□ -2.56
USP42Q9H9J4 RNU6-235P-201ENST00000362644 107 ntBASIC-0.93□□□□□ -2.56
USP42Q9H9J4 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.93□□□□□ -2.56
USP42Q9H9J4 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.93□□□□□ -2.56
USP42Q9H9J4 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.93□□□□□ -2.56
USP42Q9H9J4 SNORD101-201ENST00000384027 73 ntBASIC-0.93□□□□□ -2.56
USP42Q9H9J4 RNU6-24P-201ENST00000384440 107 ntBASIC-0.93□□□□□ -2.56
USP42Q9H9J4 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.93□□□□□ -2.56
USP42Q9H9J4 RNU6-918P-201ENST00000391219 106 ntBASIC-0.93□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms