Protein–RNA interactions for Protein: Q9H3S1

SEMA4A, Semaphorin-4A, humanhuman

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4AQ9H3S1 MIR3064-201ENST00000581130 66 ntBASIC1.52□□□□□ -2.17
SEMA4AQ9H3S1 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.52□□□□□ -2.17
SEMA4AQ9H3S1 Y_RNA.13-201ENST00000362403 112 ntBASIC1.51□□□□□ -2.17
SEMA4AQ9H3S1 Y_RNA.205-201ENST00000364128 113 ntBASIC1.51□□□□□ -2.17
SEMA4AQ9H3S1 Y_RNA.532-201ENST00000384590 113 ntBASIC1.51□□□□□ -2.17
SEMA4AQ9H3S1 SNORD12-201ENST00000391002 90 ntBASIC1.51□□□□□ -2.17
SEMA4AQ9H3S1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SEMA4AQ9H3S1 MIR151B-201ENST00000584249 96 ntBASIC1.51□□□□□ -2.17
SEMA4AQ9H3S1 MIR664A-201ENST00000626086 82 ntBASIC1.51□□□□□ -2.17
SEMA4AQ9H3S1 RNU6-315P-201ENST00000362666 107 ntBASIC1.5□□□□□ -2.17
SEMA4AQ9H3S1 MT-TF-201ENST00000387314 71 ntBASIC1.5□□□□□ -2.17
SEMA4AQ9H3S1 SNORD100-201ENST00000408573 76 ntBASIC1.5□□□□□ -2.17
SEMA4AQ9H3S1 RNU7-185P-201ENST00000459215 60 ntBASIC1.5□□□□□ -2.17
SEMA4AQ9H3S1 AC104996.3-201ENST00000590718 94 ntBASIC1.5□□□□□ -2.17
SEMA4AQ9H3S1 MIR7974-201ENST00000615835 79 ntBASIC1.5□□□□□ -2.17
SEMA4AQ9H3S1 MIR6788-201ENST00000618842 66 ntBASIC1.5□□□□□ -2.17
SEMA4AQ9H3S1 RNU6-1094P-201ENST00000362416 104 ntBASIC1.49□□□□□ -2.17
SEMA4AQ9H3S1 RNU4-58P-201ENST00000363192 141 ntBASIC1.49□□□□□ -2.17
SEMA4AQ9H3S1 Y_RNA.491-201ENST00000384417 107 ntBASIC1.49□□□□□ -2.17
SEMA4AQ9H3S1 Y_RNA.536-201ENST00000384621 113 ntBASIC1.49□□□□□ -2.17
SEMA4AQ9H3S1 snoU13.17-201ENST00000458802 104 ntBASIC1.49□□□□□ -2.17
SEMA4AQ9H3S1 RNU6-523P-201ENST00000516304 54 ntBASIC1.49□□□□□ -2.17
SEMA4AQ9H3S1 AC023827.1-201ENST00000569247 97 ntBASIC1.49□□□□□ -2.17
SEMA4AQ9H3S1 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.49□□□□□ -2.17
SEMA4AQ9H3S1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.49□□□□□ -2.17
SEMA4AQ9H3S1 MIR101-2-201ENST00000362195 79 ntBASIC1.48□□□□□ -2.17
SEMA4AQ9H3S1 MIR96-201ENST00000362288 78 ntBASIC1.48□□□□□ -2.17
SEMA4AQ9H3S1 MIRLET7A1-201ENST00000362295 80 ntBASIC1.48□□□□□ -2.17
SEMA4AQ9H3S1 RNU6-466P-201ENST00000391224 103 ntBASIC1.48□□□□□ -2.17
SEMA4AQ9H3S1 MIR18B-201ENST00000454574 71 ntBASIC1.48□□□□□ -2.17
SEMA4AQ9H3S1 SNORA70.22-201ENST00000517160 124 ntBASIC1.48□□□□□ -2.17
SEMA4AQ9H3S1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.48□□□□□ -2.17
SEMA4AQ9H3S1 SNORD113.3-201ENST00000364630 78 ntBASIC1.47□□□□□ -2.17
SEMA4AQ9H3S1 RNU6-686P-201ENST00000364839 107 ntBASIC1.47□□□□□ -2.17
SEMA4AQ9H3S1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SEMA4AQ9H3S1 Y_RNA.545-201ENST00000384652 105 ntBASIC1.47□□□□□ -2.17
SEMA4AQ9H3S1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.47□□□□□ -2.17
SEMA4AQ9H3S1 AL354695.1-201ENST00000427935 228 ntBASIC1.47□□□□□ -2.17
SEMA4AQ9H3S1 RNU7-90P-201ENST00000459216 62 ntBASIC1.47□□□□□ -2.17
SEMA4AQ9H3S1 RNU7-21P-201ENST00000459430 62 ntBASIC1.47□□□□□ -2.17
SEMA4AQ9H3S1 SNORD79.1-201ENST00000516069 84 ntBASIC1.47□□□□□ -2.17
SEMA4AQ9H3S1 RNU6-1194P-201ENST00000516208 104 ntBASIC1.47□□□□□ -2.17
SEMA4AQ9H3S1 MIR4771-2-201ENST00000577758 74 ntBASIC1.47□□□□□ -2.17
SEMA4AQ9H3S1 MIR4771-1-201ENST00000582617 74 ntBASIC1.47□□□□□ -2.17
SEMA4AQ9H3S1 Y_RNA.363-201ENST00000365529 113 ntBASIC1.46□□□□□ -2.18
SEMA4AQ9H3S1 MIR520E-201ENST00000384867 87 ntBASIC1.46□□□□□ -2.18
SEMA4AQ9H3S1 RNU6-910P-201ENST00000390844 107 ntBASIC1.46□□□□□ -2.18
SEMA4AQ9H3S1 SNORA75.2-201ENST00000391138 150 ntBASIC1.46□□□□□ -2.18
SEMA4AQ9H3S1 SNORA75.3-201ENST00000391231 150 ntBASIC1.46□□□□□ -2.18
SEMA4AQ9H3S1 SNORD111-201ENST00000408139 94 ntBASIC1.46□□□□□ -2.18
SEMA4AQ9H3S1 MIR1257-201ENST00000408490 117 ntBASIC1.46□□□□□ -2.18
SEMA4AQ9H3S1 Y_RNA.697-201ENST00000516776 113 ntBASIC1.46□□□□□ -2.18
SEMA4AQ9H3S1 MIR3140-201ENST00000583685 90 ntBASIC1.46□□□□□ -2.18
SEMA4AQ9H3S1 RNA5SP245-201ENST00000364239 121 ntBASIC1.45□□□□□ -2.18
SEMA4AQ9H3S1 RNU6-934P-201ENST00000365154 107 ntBASIC1.45□□□□□ -2.18
SEMA4AQ9H3S1 RNU6-1052P-201ENST00000411398 104 ntBASIC1.45□□□□□ -2.18
SEMA4AQ9H3S1 RNU6-719P-201ENST00000516671 104 ntBASIC1.45□□□□□ -2.18
SEMA4AQ9H3S1 TRDV1-202ENST00000621643 102 ntBASIC1.45□□□□□ -2.18
SEMA4AQ9H3S1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SEMA4AQ9H3S1 RNU6-955P-201ENST00000410497 104 ntBASIC1.44□□□□□ -2.18
SEMA4AQ9H3S1 AC092628.1-201ENST00000436250 252 ntBASIC1.44□□□□□ -2.18
SEMA4AQ9H3S1 RPS29P1-201ENST00000465274 159 ntBASIC1.44□□□□□ -2.18
SEMA4AQ9H3S1 Y_RNA.809-201ENST00000516058 95 ntBASIC1.44□□□□□ -2.18
SEMA4AQ9H3S1 AC036111.3-201ENST00000526389 112 ntBASIC1.44□□□□□ -2.18
SEMA4AQ9H3S1 SNORD92-201ENST00000585078 85 ntBASIC1.44□□□□□ -2.18
SEMA4AQ9H3S1 MIR6082-201ENST00000613604 109 ntBASIC1.44□□□□□ -2.18
SEMA4AQ9H3S1 AC106800.4-201ENST00000614905 153 ntBASIC1.44□□□□□ -2.18
SEMA4AQ9H3S1 U6.100-201ENST00000636230 99 ntBASIC1.44□□□□□ -2.18
SEMA4AQ9H3S1 RNU6-939P-201ENST00000384634 107 ntBASIC1.43□□□□□ -2.18
SEMA4AQ9H3S1 SNORD77.2-201ENST00000391045 68 ntBASIC1.43□□□□□ -2.18
SEMA4AQ9H3S1 RNU6-557P-201ENST00000516842 110 ntBASIC1.43□□□□□ -2.18
SEMA4AQ9H3S1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SEMA4AQ9H3S1 MIR26B-201ENST00000362251 77 ntBASIC1.42□□□□□ -2.18
SEMA4AQ9H3S1 RNU6-208P-201ENST00000362431 107 ntBASIC1.42□□□□□ -2.18
SEMA4AQ9H3S1 RNU6-330P-201ENST00000363015 107 ntBASIC1.42□□□□□ -2.18
SEMA4AQ9H3S1 SNORD26-201ENST00000384147 75 ntBASIC1.42□□□□□ -2.18
SEMA4AQ9H3S1 MIR548U-201ENST00000390728 81 ntBASIC1.42□□□□□ -2.18
SEMA4AQ9H3S1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.42□□□□□ -2.18
SEMA4AQ9H3S1 MIR548J-201ENST00000408833 112 ntBASIC1.42□□□□□ -2.18
SEMA4AQ9H3S1 RNU7-40P-201ENST00000516397 64 ntBASIC1.42□□□□□ -2.18
SEMA4AQ9H3S1 RNU6-70P-201ENST00000516438 60 ntBASIC1.42□□□□□ -2.18
SEMA4AQ9H3S1 RNU6-1015P-201ENST00000517121 99 ntBASIC1.42□□□□□ -2.18
SEMA4AQ9H3S1 AC068338.1-201ENST00000565567 176 ntBASIC1.42□□□□□ -2.18
SEMA4AQ9H3S1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.42□□□□□ -2.18
SEMA4AQ9H3S1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
SEMA4AQ9H3S1 Y_RNA.371-201ENST00000365591 113 ntBASIC1.41□□□□□ -2.18
SEMA4AQ9H3S1 SNORA25-201ENST00000384384 134 ntBASIC1.41□□□□□ -2.18
SEMA4AQ9H3S1 RNU6-788P-201ENST00000390967 104 ntBASIC1.41□□□□□ -2.18
SEMA4AQ9H3S1 RNU6-448P-201ENST00000517052 107 ntBASIC1.41□□□□□ -2.18
SEMA4AQ9H3S1 RNU7-156P-201ENST00000517214 74 ntBASIC1.41□□□□□ -2.18
SEMA4AQ9H3S1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
SEMA4AQ9H3S1 Y_RNA.12-201ENST00000362393 112 ntBASIC1.4□□□□□ -2.19
SEMA4AQ9H3S1 RNU6-1051P-201ENST00000365471 102 ntBASIC1.4□□□□□ -2.19
SEMA4AQ9H3S1 MIR222-201ENST00000384992 110 ntBASIC1.4□□□□□ -2.19
SEMA4AQ9H3S1 MIR758-201ENST00000390227 88 ntBASIC1.4□□□□□ -2.19
SEMA4AQ9H3S1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
SEMA4AQ9H3S1 FGF7P7-201ENST00000514120 227 ntBASIC1.4□□□□□ -2.19
SEMA4AQ9H3S1 MIR4696-201ENST00000581431 70 ntBASIC1.4□□□□□ -2.19
SEMA4AQ9H3S1 Y_RNA.207-201ENST00000364142 106 ntBASIC1.39□□□□□ -2.19
SEMA4AQ9H3S1 MIR520H-201ENST00000385126 88 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 709.3 ms