Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.45□□□□□ -2.18
RNF38Q9H0F5 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.45□□□□□ -2.18
RNF38Q9H0F5 AL157834.3-201ENST00000615543 103 ntBASIC1.45□□□□□ -2.18
RNF38Q9H0F5 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
RNF38Q9H0F5 RNU6-535P-201ENST00000384722 107 ntBASIC1.44□□□□□ -2.18
RNF38Q9H0F5 RNU7-102P-201ENST00000458948 62 ntBASIC1.44□□□□□ -2.18
RNF38Q9H0F5 SNORD79.1-201ENST00000516069 84 ntBASIC1.44□□□□□ -2.18
RNF38Q9H0F5 AC027335.2-201ENST00000624030 375 ntBASIC1.44□□□□□ -2.18
RNF38Q9H0F5 RNU6-1260P-201ENST00000362944 107 ntBASIC1.43□□□□□ -2.18
RNF38Q9H0F5 RNA5SP245-201ENST00000364239 121 ntBASIC1.43□□□□□ -2.18
RNF38Q9H0F5 SNORA25.8-201ENST00000364831 128 ntBASIC1.43□□□□□ -2.18
RNF38Q9H0F5 MIR599-201ENST00000385069 95 ntBASIC1.43□□□□□ -2.18
RNF38Q9H0F5 MIR518E-201ENST00000385252 88 ntBASIC1.43□□□□□ -2.18
RNF38Q9H0F5 MIR100-201ENST00000385259 80 ntBASIC1.43□□□□□ -2.18
RNF38Q9H0F5 MIR938-201ENST00000401216 83 ntBASIC1.43□□□□□ -2.18
RNF38Q9H0F5 RNA5SP247-201ENST00000411181 105 ntBASIC1.43□□□□□ -2.18
RNF38Q9H0F5 RNU7-90P-201ENST00000459216 62 ntBASIC1.43□□□□□ -2.18
RNF38Q9H0F5 RNU6-977P-201ENST00000516411 103 ntBASIC1.43□□□□□ -2.18
RNF38Q9H0F5 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.43□□□□□ -2.18
RNF38Q9H0F5 MIR7974-201ENST00000615835 79 ntBASIC1.43□□□□□ -2.18
RNF38Q9H0F5 AL353770.2-201ENST00000620024 78 ntBASIC1.43□□□□□ -2.18
RNF38Q9H0F5 U6.100-201ENST00000636230 99 ntBASIC1.43□□□□□ -2.18
RNF38Q9H0F5 RNU6-1094P-201ENST00000362416 104 ntBASIC1.42□□□□□ -2.18
RNF38Q9H0F5 RNU6-1229P-201ENST00000364295 107 ntBASIC1.42□□□□□ -2.18
RNF38Q9H0F5 RNU6-291P-201ENST00000384720 107 ntBASIC1.42□□□□□ -2.18
RNF38Q9H0F5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
RNF38Q9H0F5 SNORD12-201ENST00000391002 90 ntBASIC1.42□□□□□ -2.18
RNF38Q9H0F5 AC008608.1-201ENST00000603910 127 ntBASIC1.42□□□□□ -2.18
RNF38Q9H0F5 AC145423.2-201ENST00000610631 239 ntBASIC1.42□□□□□ -2.18
RNF38Q9H0F5 Y_RNA.788-201ENST00000622394 112 ntBASIC1.42□□□□□ -2.18
RNF38Q9H0F5 RNU6-369P-201ENST00000362515 102 ntBASIC1.41□□□□□ -2.18
RNF38Q9H0F5 RNU6-686P-201ENST00000364839 107 ntBASIC1.41□□□□□ -2.18
RNF38Q9H0F5 Y_RNA.565-201ENST00000384719 101 ntBASIC1.41□□□□□ -2.18
RNF38Q9H0F5 MIR519A1-201ENST00000385257 85 ntBASIC1.41□□□□□ -2.18
RNF38Q9H0F5 AC097635.1-201ENST00000450678 155 ntBASIC1.41□□□□□ -2.18
RNF38Q9H0F5 FGF7P7-201ENST00000514120 227 ntBASIC1.41□□□□□ -2.18
RNF38Q9H0F5 MIR4484-201ENST00000582855 83 ntBASIC1.41□□□□□ -2.18
RNF38Q9H0F5 MIRLET7A1-201ENST00000362295 80 ntBASIC1.4□□□□□ -2.19
RNF38Q9H0F5 RNU6-392P-201ENST00000364926 101 ntBASIC1.4□□□□□ -2.19
RNF38Q9H0F5 RNU6-557P-201ENST00000516842 110 ntBASIC1.4□□□□□ -2.19
RNF38Q9H0F5 AC138907.6-201ENST00000568401 126 ntBASIC1.4□□□□□ -2.19
RNF38Q9H0F5 AC138869.1-201ENST00000568623 124 ntBASIC1.4□□□□□ -2.19
RNF38Q9H0F5 MIR4804-201ENST00000581683 73 ntBASIC1.4□□□□□ -2.19
RNF38Q9H0F5 MIR8070-201ENST00000616510 88 ntBASIC1.4□□□□□ -2.19
RNF38Q9H0F5 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
RNF38Q9H0F5 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
RNF38Q9H0F5 SNORA25.9-201ENST00000365087 128 ntBASIC1.39□□□□□ -2.19
RNF38Q9H0F5 SNORD101-201ENST00000384027 73 ntBASIC1.39□□□□□ -2.19
RNF38Q9H0F5 MIR520F-201ENST00000384824 87 ntBASIC1.39□□□□□ -2.19
RNF38Q9H0F5 SCARNA18B-201ENST00000458806 135 ntBASIC1.39□□□□□ -2.19
RNF38Q9H0F5 RNU1-123P-201ENST00000458950 160 ntBASIC1.39□□□□□ -2.19
RNF38Q9H0F5 RNA5SP61-201ENST00000516453 100 ntBASIC1.39□□□□□ -2.19
RNF38Q9H0F5 U7.4-201ENST00000614961 63 ntBASIC1.39□□□□□ -2.19
RNF38Q9H0F5 RNU6-208P-201ENST00000362431 107 ntBASIC1.38□□□□□ -2.19
RNF38Q9H0F5 Y_RNA.239-201ENST00000364444 113 ntBASIC1.38□□□□□ -2.19
RNF38Q9H0F5 SNORD77.2-201ENST00000391045 68 ntBASIC1.38□□□□□ -2.19
RNF38Q9H0F5 RNU1-119P-201ENST00000391122 165 ntBASIC1.38□□□□□ -2.19
RNF38Q9H0F5 AC004223.1-201ENST00000479840 271 ntBASIC1.38□□□□□ -2.19
RNF38Q9H0F5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
RNF38Q9H0F5 MIR1-1-201ENST00000362147 71 ntBASIC1.37□□□□□ -2.19
RNF38Q9H0F5 RNU6-664P-201ENST00000362381 107 ntBASIC1.37□□□□□ -2.19
RNF38Q9H0F5 MIR150-201ENST00000385048 84 ntBASIC1.37□□□□□ -2.19
RNF38Q9H0F5 AC002429.1-201ENST00000437672 148 ntBASIC1.37□□□□□ -2.19
RNF38Q9H0F5 MIR4696-201ENST00000581431 70 ntBASIC1.37□□□□□ -2.19
RNF38Q9H0F5 MIR3660-201ENST00000584845 100 ntBASIC1.37□□□□□ -2.19
RNF38Q9H0F5 Y_RNA.532-201ENST00000384590 113 ntBASIC1.36□□□□□ -2.19
RNF38Q9H0F5 MIR618-201ENST00000385287 98 ntBASIC1.36□□□□□ -2.19
RNF38Q9H0F5 SNORA40.6-201ENST00000391153 128 ntBASIC1.36□□□□□ -2.19
RNF38Q9H0F5 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.36□□□□□ -2.19
RNF38Q9H0F5 RNU6-380P-201ENST00000410207 107 ntBASIC1.36□□□□□ -2.19
RNF38Q9H0F5 AC067940.1-201ENST00000458411 300 ntBASIC1.36□□□□□ -2.19
RNF38Q9H0F5 RNU7-56P-201ENST00000458744 62 ntBASIC1.36□□□□□ -2.19
RNF38Q9H0F5 MIR3140-201ENST00000583685 90 ntBASIC1.36□□□□□ -2.19
RNF38Q9H0F5 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
RNF38Q9H0F5 Y_RNA.32-201ENST00000362589 110 ntBASIC1.35□□□□□ -2.19
RNF38Q9H0F5 Y_RNA.226-201ENST00000364337 114 ntBASIC1.35□□□□□ -2.19
RNF38Q9H0F5 RNU6-1051P-201ENST00000365471 102 ntBASIC1.35□□□□□ -2.19
RNF38Q9H0F5 AC073261.1-201ENST00000429409 121 ntBASIC1.35□□□□□ -2.19
RNF38Q9H0F5 snoU13.17-201ENST00000458802 104 ntBASIC1.35□□□□□ -2.19
RNF38Q9H0F5 Y_RNA.660-201ENST00000516002 120 ntBASIC1.35□□□□□ -2.19
RNF38Q9H0F5 RNA5SP404-201ENST00000517118 132 ntBASIC1.35□□□□□ -2.19
RNF38Q9H0F5 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.35□□□□□ -2.19
RNF38Q9H0F5 RNU5F-1-201ENST00000362507 117 ntBASIC1.34□□□□□ -2.19
RNF38Q9H0F5 Y_RNA.596-201ENST00000410462 109 ntBASIC1.34□□□□□ -2.19
RNF38Q9H0F5 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.34□□□□□ -2.19
RNF38Q9H0F5 Y_RNA.207-201ENST00000364142 106 ntBASIC1.33□□□□□ -2.2
RNF38Q9H0F5 MIR19B1-201ENST00000384829 87 ntBASIC1.33□□□□□ -2.2
RNF38Q9H0F5 RNU6-1052P-201ENST00000411398 104 ntBASIC1.33□□□□□ -2.2
RNF38Q9H0F5 RNU6-1265P-201ENST00000516342 103 ntBASIC1.33□□□□□ -2.2
RNF38Q9H0F5 RNU6-719P-201ENST00000516671 104 ntBASIC1.33□□□□□ -2.2
RNF38Q9H0F5 SNORA31.14-201ENST00000516728 116 ntBASIC1.33□□□□□ -2.2
RNF38Q9H0F5 MIR3134-201ENST00000579433 74 ntBASIC1.33□□□□□ -2.2
RNF38Q9H0F5 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.32□□□□□ -2.2
RNF38Q9H0F5 Y_RNA.12-201ENST00000362393 112 ntBASIC1.32□□□□□ -2.2
RNF38Q9H0F5 Y_RNA.545-201ENST00000384652 105 ntBASIC1.32□□□□□ -2.2
RNF38Q9H0F5 MIR1827-201ENST00000408549 66 ntBASIC1.32□□□□□ -2.2
RNF38Q9H0F5 RMST_2.1-201ENST00000617263 136 ntBASIC1.32□□□□□ -2.2
RNF38Q9H0F5 RNU1-124P-201ENST00000363861 145 ntBASIC1.31□□□□□ -2.2
RNF38Q9H0F5 Y_RNA.264-201ENST00000364665 102 ntBASIC1.31□□□□□ -2.2
RNF38Q9H0F5 RNU6-939P-201ENST00000384634 107 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 210.1 ms