Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 RNU6-290P-201ENST00000365212 101 ntBASIC-1.51□□□□□ -2.65
LIMD2Q9BT23 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.51□□□□□ -2.65
LIMD2Q9BT23 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.51□□□□□ -2.65
LIMD2Q9BT23 SNORD54-201ENST00000459159 67 ntBASIC-1.51□□□□□ -2.65
LIMD2Q9BT23 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.51□□□□□ -2.65
LIMD2Q9BT23 SNORA25.1-201ENST00000362326 128 ntBASIC-1.52□□□□□ -2.65
LIMD2Q9BT23 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.52□□□□□ -2.65
LIMD2Q9BT23 SNORD27-201ENST00000363981 72 ntBASIC-1.52□□□□□ -2.65
LIMD2Q9BT23 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.52□□□□□ -2.65
LIMD2Q9BT23 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.52□□□□□ -2.65
LIMD2Q9BT23 RNU6-243P-201ENST00000391140 107 ntBASIC-1.52□□□□□ -2.65
LIMD2Q9BT23 SNORD19-201ENST00000391191 68 ntBASIC-1.52□□□□□ -2.65
LIMD2Q9BT23 MIR548H3-201ENST00000408771 118 ntBASIC-1.52□□□□□ -2.65
LIMD2Q9BT23 AC113618.1-201ENST00000416747 285 ntBASIC-1.52□□□□□ -2.65
LIMD2Q9BT23 Y_RNA.717-201ENST00000517106 92 ntBASIC-1.52□□□□□ -2.65
LIMD2Q9BT23 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.52□□□□□ -2.65
LIMD2Q9BT23 SNORD58B-201ENST00000607313 66 ntBASIC-1.52□□□□□ -2.65
LIMD2Q9BT23 MIR3688-2-201ENST00000636963 87 ntBASIC-1.52□□□□□ -2.65
LIMD2Q9BT23 RNU6-235P-201ENST00000362644 107 ntBASIC-1.53□□□□□ -2.65
LIMD2Q9BT23 RNA5SP405-201ENST00000363059 114 ntBASIC-1.53□□□□□ -2.65
LIMD2Q9BT23 RNU6-690P-201ENST00000365242 106 ntBASIC-1.53□□□□□ -2.65
LIMD2Q9BT23 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.53□□□□□ -2.65
LIMD2Q9BT23 MTND4P17-201ENST00000470444 350 ntBASIC-1.53□□□□□ -2.65
LIMD2Q9BT23 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.53□□□□□ -2.65
LIMD2Q9BT23 RNA5SP236-201ENST00000516169 116 ntBASIC-1.53□□□□□ -2.65
LIMD2Q9BT23 AC037487.3-201ENST00000606668 112 ntBASIC-1.53□□□□□ -2.65
LIMD2Q9BT23 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.54□□□□□ -2.66
LIMD2Q9BT23 RNU6-774P-201ENST00000363238 107 ntBASIC-1.54□□□□□ -2.66
LIMD2Q9BT23 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.54□□□□□ -2.66
LIMD2Q9BT23 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.54□□□□□ -2.66
LIMD2Q9BT23 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.54□□□□□ -2.66
LIMD2Q9BT23 RNU6-80P-201ENST00000384195 107 ntBASIC-1.54□□□□□ -2.66
LIMD2Q9BT23 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.54□□□□□ -2.66
LIMD2Q9BT23 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.54□□□□□ -2.66
LIMD2Q9BT23 AC104985.2-201ENST00000620598 500 ntBASIC-1.54□□□□□ -2.66
LIMD2Q9BT23 RNU6-79P-201ENST00000362511 107 ntBASIC-1.55□□□□□ -2.66
LIMD2Q9BT23 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.55□□□□□ -2.66
LIMD2Q9BT23 SNORD81.2-201ENST00000365153 76 ntBASIC-1.55□□□□□ -2.66
LIMD2Q9BT23 RNY4P28-201ENST00000365281 93 ntBASIC-1.55□□□□□ -2.66
LIMD2Q9BT23 SNORD38.2-201ENST00000384470 69 ntBASIC-1.55□□□□□ -2.66
LIMD2Q9BT23 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.55□□□□□ -2.66
LIMD2Q9BT23 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.55□□□□□ -2.66
LIMD2Q9BT23 U3.27-201ENST00000391237 200 ntBASIC-1.55□□□□□ -2.66
LIMD2Q9BT23 RNU6-559P-201ENST00000516151 98 ntBASIC-1.55□□□□□ -2.66
LIMD2Q9BT23 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.55□□□□□ -2.66
LIMD2Q9BT23 MIR4696-201ENST00000581431 70 ntBASIC-1.55□□□□□ -2.66
LIMD2Q9BT23 RNU6-664P-201ENST00000362381 107 ntBASIC-1.56□□□□□ -2.66
LIMD2Q9BT23 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.56□□□□□ -2.66
LIMD2Q9BT23 RNU6-647P-201ENST00000364243 107 ntBASIC-1.56□□□□□ -2.66
LIMD2Q9BT23 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.56□□□□□ -2.66
LIMD2Q9BT23 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.56□□□□□ -2.66
LIMD2Q9BT23 AC103591.3-201ENST00000608684 209 ntBASIC-1.56□□□□□ -2.66
LIMD2Q9BT23 AC002553.4-201ENST00000616896 331 ntBASIC-1.56□□□□□ -2.66
LIMD2Q9BT23 U4.5-201ENST00000617137 123 ntBASIC-1.56□□□□□ -2.66
LIMD2Q9BT23 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.56□□□□□ -2.66
LIMD2Q9BT23 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.56□□□□□ -2.66
LIMD2Q9BT23 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.57□□□□□ -2.66
LIMD2Q9BT23 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.57□□□□□ -2.66
LIMD2Q9BT23 RNU6-957P-201ENST00000363652 99 ntBASIC-1.57□□□□□ -2.66
LIMD2Q9BT23 RNY4P7-201ENST00000364600 96 ntBASIC-1.57□□□□□ -2.66
LIMD2Q9BT23 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.57□□□□□ -2.66
LIMD2Q9BT23 SNORD101-201ENST00000384027 73 ntBASIC-1.57□□□□□ -2.66
LIMD2Q9BT23 MIR34C-201ENST00000384831 77 ntBASIC-1.57□□□□□ -2.66
LIMD2Q9BT23 RNU6-381P-201ENST00000391259 108 ntBASIC-1.57□□□□□ -2.66
LIMD2Q9BT23 RNU4-88P-201ENST00000411220 86 ntBASIC-1.57□□□□□ -2.66
LIMD2Q9BT23 AC138393.2-201ENST00000414742 246 ntBASIC-1.57□□□□□ -2.66
LIMD2Q9BT23 AL353691.2-201ENST00000443795 59 ntBASIC-1.57□□□□□ -2.66
LIMD2Q9BT23 RNU7-164P-201ENST00000459221 62 ntBASIC-1.57□□□□□ -2.66
LIMD2Q9BT23 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.57□□□□□ -2.66
LIMD2Q9BT23 AC073869.6-201ENST00000640656 341 ntBASIC-1.57□□□□□ -2.66
LIMD2Q9BT23 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.58□□□□□ -2.66
LIMD2Q9BT23 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.58□□□□□ -2.66
LIMD2Q9BT23 SNORA63.7-201ENST00000365579 123 ntBASIC-1.58□□□□□ -2.66
LIMD2Q9BT23 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.58□□□□□ -2.66
LIMD2Q9BT23 RNU6-616P-201ENST00000384353 107 ntBASIC-1.58□□□□□ -2.66
LIMD2Q9BT23 RNU6-400P-201ENST00000391173 106 ntBASIC-1.58□□□□□ -2.66
LIMD2Q9BT23 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.58□□□□□ -2.66
LIMD2Q9BT23 MTND1P29-201ENST00000448112 647 ntBASIC-1.58□□□□□ -2.66
LIMD2Q9BT23 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.58□□□□□ -2.66
LIMD2Q9BT23 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.58□□□□□ -2.66
LIMD2Q9BT23 AC138907.4-201ENST00000570107 226 ntBASIC-1.58□□□□□ -2.66
LIMD2Q9BT23 AC021443.1-201ENST00000604478 211 ntBASIC-1.58□□□□□ -2.66
LIMD2Q9BT23 RNU6-935P-201ENST00000410371 100 ntBASIC-1.59□□□□□ -2.66
LIMD2Q9BT23 RNU7-123P-201ENST00000515911 60 ntBASIC-1.59□□□□□ -2.66
LIMD2Q9BT23 AC092794.1-201ENST00000612734 582 ntBASIC-1.59□□□□□ -2.66
LIMD2Q9BT23 RNU6-924P-201ENST00000362926 108 ntBASIC-1.6□□□□□ -2.67
LIMD2Q9BT23 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.6□□□□□ -2.67
LIMD2Q9BT23 RNU6-103P-201ENST00000363686 107 ntBASIC-1.6□□□□□ -2.67
LIMD2Q9BT23 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.6□□□□□ -2.67
LIMD2Q9BT23 RNU6-990P-201ENST00000364385 104 ntBASIC-1.6□□□□□ -2.67
LIMD2Q9BT23 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.6□□□□□ -2.67
LIMD2Q9BT23 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.6□□□□□ -2.67
LIMD2Q9BT23 MIR1302-11-201ENST00000408051 138 ntBASIC-1.6□□□□□ -2.67
LIMD2Q9BT23 MIR1302-9-201ENST00000408365 138 ntBASIC-1.6□□□□□ -2.67
LIMD2Q9BT23 MIR1302-10-201ENST00000408734 138 ntBASIC-1.6□□□□□ -2.67
LIMD2Q9BT23 MIR4760-201ENST00000585040 80 ntBASIC-1.6□□□□□ -2.67
LIMD2Q9BT23 AC113139.1-201ENST00000605049 239 ntBASIC-1.6□□□□□ -2.67
LIMD2Q9BT23 MIR1302-2-201ENST00000607096 138 ntBASIC-1.6□□□□□ -2.67
LIMD2Q9BT23 MIR5683-201ENST00000636514 76 ntBASIC-1.6□□□□□ -2.67
LIMD2Q9BT23 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.61□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 235.7 ms