Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 Y_RNA.660-201ENST00000516002 120 ntBASIC1.44□□□□□ -2.18
CDK5RAP1Q96SZ6 RNU7-40P-201ENST00000516397 64 ntBASIC1.44□□□□□ -2.18
CDK5RAP1Q96SZ6 RNU6-303P-201ENST00000517091 106 ntBASIC1.44□□□□□ -2.18
CDK5RAP1Q96SZ6 AC036111.3-201ENST00000526389 112 ntBASIC1.44□□□□□ -2.18
CDK5RAP1Q96SZ6 MIR3664-201ENST00000579074 99 ntBASIC1.44□□□□□ -2.18
CDK5RAP1Q96SZ6 MIR3937-201ENST00000580135 106 ntBASIC1.44□□□□□ -2.18
CDK5RAP1Q96SZ6 MIR7974-201ENST00000615835 79 ntBASIC1.44□□□□□ -2.18
CDK5RAP1Q96SZ6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
CDK5RAP1Q96SZ6 RNU6-664P-201ENST00000362381 107 ntBASIC1.43□□□□□ -2.18
CDK5RAP1Q96SZ6 Y_RNA.42-201ENST00000362660 108 ntBASIC1.43□□□□□ -2.18
CDK5RAP1Q96SZ6 RNU6-934P-201ENST00000365154 107 ntBASIC1.43□□□□□ -2.18
CDK5RAP1Q96SZ6 Y_RNA.386-201ENST00000383913 105 ntBASIC1.43□□□□□ -2.18
CDK5RAP1Q96SZ6 SNORD26-201ENST00000384147 75 ntBASIC1.43□□□□□ -2.18
CDK5RAP1Q96SZ6 RNU6-1241P-201ENST00000384536 107 ntBASIC1.43□□□□□ -2.18
CDK5RAP1Q96SZ6 RNU6-380P-201ENST00000410207 107 ntBASIC1.43□□□□□ -2.18
CDK5RAP1Q96SZ6 Y_RNA.596-201ENST00000410462 109 ntBASIC1.43□□□□□ -2.18
CDK5RAP1Q96SZ6 Y_RNA.681-201ENST00000516445 113 ntBASIC1.43□□□□□ -2.18
CDK5RAP1Q96SZ6 RNU6-539P-201ENST00000516665 103 ntBASIC1.43□□□□□ -2.18
CDK5RAP1Q96SZ6 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.43□□□□□ -2.18
CDK5RAP1Q96SZ6 SNORD33-201ENST00000362761 85 ntBASIC1.42□□□□□ -2.18
CDK5RAP1Q96SZ6 RNU6-1260P-201ENST00000362944 107 ntBASIC1.42□□□□□ -2.18
CDK5RAP1Q96SZ6 SNORD101-201ENST00000384027 73 ntBASIC1.42□□□□□ -2.18
CDK5RAP1Q96SZ6 RNU6-154P-201ENST00000384306 106 ntBASIC1.42□□□□□ -2.18
CDK5RAP1Q96SZ6 MIR599-201ENST00000385069 95 ntBASIC1.42□□□□□ -2.18
CDK5RAP1Q96SZ6 RNU6-587P-201ENST00000391282 106 ntBASIC1.42□□□□□ -2.18
CDK5RAP1Q96SZ6 MIR1265-201ENST00000408444 86 ntBASIC1.42□□□□□ -2.18
CDK5RAP1Q96SZ6 RNU6-634P-201ENST00000459134 106 ntBASIC1.42□□□□□ -2.18
CDK5RAP1Q96SZ6 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.42□□□□□ -2.18
CDK5RAP1Q96SZ6 RNU6-1053P-201ENST00000515930 101 ntBASIC1.42□□□□□ -2.18
CDK5RAP1Q96SZ6 RNU6-807P-201ENST00000516805 107 ntBASIC1.42□□□□□ -2.18
CDK5RAP1Q96SZ6 AL512310.8-201ENST00000550183 120 ntBASIC1.42□□□□□ -2.18
CDK5RAP1Q96SZ6 MIR548H5-201ENST00000580314 60 ntBASIC1.42□□□□□ -2.18
CDK5RAP1Q96SZ6 AC008608.1-201ENST00000603910 127 ntBASIC1.42□□□□□ -2.18
CDK5RAP1Q96SZ6 AL359821.1-201ENST00000605519 182 ntBASIC1.42□□□□□ -2.18
CDK5RAP1Q96SZ6 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.42□□□□□ -2.18
CDK5RAP1Q96SZ6 Y_RNA.56-201ENST00000362798 112 ntBASIC1.41□□□□□ -2.18
CDK5RAP1Q96SZ6 Y_RNA.239-201ENST00000364444 113 ntBASIC1.41□□□□□ -2.18
CDK5RAP1Q96SZ6 RNU6-590P-201ENST00000365039 107 ntBASIC1.41□□□□□ -2.18
CDK5RAP1Q96SZ6 Y_RNA.340-201ENST00000365330 92 ntBASIC1.41□□□□□ -2.18
CDK5RAP1Q96SZ6 MIR125B2-201ENST00000385128 89 ntBASIC1.41□□□□□ -2.18
CDK5RAP1Q96SZ6 RPS27P16-201ENST00000425758 201 ntBASIC1.41□□□□□ -2.18
CDK5RAP1Q96SZ6 YWHAEP2-201ENST00000580066 112 ntBASIC1.41□□□□□ -2.18
CDK5RAP1Q96SZ6 YWHAEP3-201ENST00000582767 121 ntBASIC1.41□□□□□ -2.18
CDK5RAP1Q96SZ6 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
CDK5RAP1Q96SZ6 RNU6-369P-201ENST00000362515 102 ntBASIC1.4□□□□□ -2.19
CDK5RAP1Q96SZ6 RNU6-824P-201ENST00000363724 104 ntBASIC1.4□□□□□ -2.19
CDK5RAP1Q96SZ6 SNORA8.1-201ENST00000384250 140 ntBASIC1.4□□□□□ -2.19
CDK5RAP1Q96SZ6 RNU6-291P-201ENST00000384720 107 ntBASIC1.4□□□□□ -2.19
CDK5RAP1Q96SZ6 SNORA31.2-201ENST00000516019 134 ntBASIC1.4□□□□□ -2.19
CDK5RAP1Q96SZ6 RNU7-156P-201ENST00000517214 74 ntBASIC1.4□□□□□ -2.19
CDK5RAP1Q96SZ6 AL353770.2-201ENST00000620024 78 ntBASIC1.4□□□□□ -2.19
CDK5RAP1Q96SZ6 RNU6-340P-201ENST00000364005 107 ntBASIC1.39□□□□□ -2.19
CDK5RAP1Q96SZ6 SNORD113.3-201ENST00000364630 78 ntBASIC1.39□□□□□ -2.19
CDK5RAP1Q96SZ6 Y_RNA.264-201ENST00000364665 102 ntBASIC1.39□□□□□ -2.19
CDK5RAP1Q96SZ6 MIR519A1-201ENST00000385257 85 ntBASIC1.39□□□□□ -2.19
CDK5RAP1Q96SZ6 MIR758-201ENST00000390227 88 ntBASIC1.39□□□□□ -2.19
CDK5RAP1Q96SZ6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CDK5RAP1Q96SZ6 SNORD30.1-201ENST00000391309 70 ntBASIC1.39□□□□□ -2.19
CDK5RAP1Q96SZ6 RNU1-123P-201ENST00000458950 160 ntBASIC1.39□□□□□ -2.19
CDK5RAP1Q96SZ6 MIR4676-201ENST00000583078 72 ntBASIC1.39□□□□□ -2.19
CDK5RAP1Q96SZ6 AL157834.3-201ENST00000615543 103 ntBASIC1.39□□□□□ -2.19
CDK5RAP1Q96SZ6 MIR1297-201ENST00000637311 77 ntBASIC1.39□□□□□ -2.19
CDK5RAP1Q96SZ6 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
CDK5RAP1Q96SZ6 RNU5F-1-201ENST00000362507 117 ntBASIC1.38□□□□□ -2.19
CDK5RAP1Q96SZ6 Y_RNA.36-201ENST00000362602 112 ntBASIC1.38□□□□□ -2.19
CDK5RAP1Q96SZ6 Y_RNA.258-201ENST00000364613 105 ntBASIC1.38□□□□□ -2.19
CDK5RAP1Q96SZ6 SNORA24B-201ENST00000384176 131 ntBASIC1.38□□□□□ -2.19
CDK5RAP1Q96SZ6 RNU6-535P-201ENST00000384722 107 ntBASIC1.38□□□□□ -2.19
CDK5RAP1Q96SZ6 MIR451A-201ENST00000385059 72 ntBASIC1.38□□□□□ -2.19
CDK5RAP1Q96SZ6 MIR154-201ENST00000385243 84 ntBASIC1.38□□□□□ -2.19
CDK5RAP1Q96SZ6 RNU6-871P-201ENST00000516122 100 ntBASIC1.38□□□□□ -2.19
CDK5RAP1Q96SZ6 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.38□□□□□ -2.19
CDK5RAP1Q96SZ6 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CDK5RAP1Q96SZ6 RNU6-649P-201ENST00000384463 107 ntBASIC1.37□□□□□ -2.19
CDK5RAP1Q96SZ6 SNORD45A-201ENST00000384512 84 ntBASIC1.37□□□□□ -2.19
CDK5RAP1Q96SZ6 MIR150-201ENST00000385048 84 ntBASIC1.37□□□□□ -2.19
CDK5RAP1Q96SZ6 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CDK5RAP1Q96SZ6 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CDK5RAP1Q96SZ6 AC097635.1-201ENST00000450678 155 ntBASIC1.37□□□□□ -2.19
CDK5RAP1Q96SZ6 RNU7-102P-201ENST00000458948 62 ntBASIC1.37□□□□□ -2.19
CDK5RAP1Q96SZ6 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.37□□□□□ -2.19
CDK5RAP1Q96SZ6 RN7SKP88-201ENST00000516847 250 ntBASIC1.37□□□□□ -2.19
CDK5RAP1Q96SZ6 MIR3660-201ENST00000584845 100 ntBASIC1.37□□□□□ -2.19
CDK5RAP1Q96SZ6 7SK.8-201ENST00000612110 250 ntBASIC1.37□□□□□ -2.19
CDK5RAP1Q96SZ6 7SK.11-201ENST00000615477 250 ntBASIC1.37□□□□□ -2.19
CDK5RAP1Q96SZ6 7SK.13-201ENST00000622040 250 ntBASIC1.37□□□□□ -2.19
CDK5RAP1Q96SZ6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CDK5RAP1Q96SZ6 Y_RNA.327-201ENST00000365201 102 ntBASIC1.36□□□□□ -2.19
CDK5RAP1Q96SZ6 SNORA40.6-201ENST00000391153 128 ntBASIC1.36□□□□□ -2.19
CDK5RAP1Q96SZ6 RNU6-321P-201ENST00000410912 106 ntBASIC1.36□□□□□ -2.19
CDK5RAP1Q96SZ6 RPS26P5-201ENST00000418544 335 ntBASIC1.36□□□□□ -2.19
CDK5RAP1Q96SZ6 RNU6-1265P-201ENST00000516342 103 ntBASIC1.36□□□□□ -2.19
CDK5RAP1Q96SZ6 MTRNR2L2-201ENST00000604882 87 ntBASIC1.36□□□□□ -2.19
CDK5RAP1Q96SZ6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
CDK5RAP1Q96SZ6 MIR942-201ENST00000401111 86 ntBASIC1.35□□□□□ -2.19
CDK5RAP1Q96SZ6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.35□□□□□ -2.19
CDK5RAP1Q96SZ6 TRMT112P2-201ENST00000512910 132 ntBASIC1.35□□□□□ -2.19
CDK5RAP1Q96SZ6 RNU6-765P-201ENST00000516916 99 ntBASIC1.35□□□□□ -2.19
CDK5RAP1Q96SZ6 RNU7-10P-201ENST00000607194 63 ntBASIC1.35□□□□□ -2.19
CDK5RAP1Q96SZ6 MIR6078-201ENST00000611069 100 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms