Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 Y_RNA.793-201ENST00000411222 111 ntBASIC-2.39□□□□□ -2.79
CCDC42Q96M95 ELOCP20-201ENST00000422460 345 ntBASIC-2.39□□□□□ -2.79
CCDC42Q96M95 Y_RNA.84-201ENST00000363011 104 ntBASIC-2.4□□□□□ -2.79
CCDC42Q96M95 RNU6-647P-201ENST00000364243 107 ntBASIC-2.4□□□□□ -2.79
CCDC42Q96M95 FGF7P4-201ENST00000509595 295 ntBASIC-2.4□□□□□ -2.79
CCDC42Q96M95 RNY4P20-201ENST00000516678 93 ntBASIC-2.4□□□□□ -2.79
CCDC42Q96M95 RNU6-90P-201ENST00000606352 106 ntBASIC-2.4□□□□□ -2.79
CCDC42Q96M95 RNU6-1216P-201ENST00000362590 107 ntBASIC-2.41□□□□□ -2.8
CCDC42Q96M95 Y_RNA.262-201ENST00000364641 102 ntBASIC-2.41□□□□□ -2.8
CCDC42Q96M95 RNU6-450P-201ENST00000364654 107 ntBASIC-2.41□□□□□ -2.8
CCDC42Q96M95 RNU6-1130P-201ENST00000365434 107 ntBASIC-2.41□□□□□ -2.8
CCDC42Q96M95 MT-TL1-201ENST00000386347 75 ntBASIC-2.41□□□□□ -2.8
CCDC42Q96M95 MIR548G-201ENST00000408442 89 ntBASIC-2.41□□□□□ -2.8
CCDC42Q96M95 RNU7-134P-201ENST00000458997 64 ntBASIC-2.41□□□□□ -2.8
CCDC42Q96M95 SNORD19B-201ENST00000459623 84 ntBASIC-2.41□□□□□ -2.8
CCDC42Q96M95 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-2.41□□□□□ -2.8
CCDC42Q96M95 MIR5591-201ENST00000578248 65 ntBASIC-2.41□□□□□ -2.8
CCDC42Q96M95 MIR1302-1-201ENST00000637932 143 ntBASIC-2.41□□□□□ -2.8
CCDC42Q96M95 Y_RNA.457-201ENST00000384237 111 ntBASIC-2.42□□□□□ -2.8
CCDC42Q96M95 RNU6-576P-201ENST00000390854 102 ntBASIC-2.42□□□□□ -2.8
CCDC42Q96M95 MIR8485-201ENST00000401372 91 ntBASIC-2.42□□□□□ -2.8
CCDC42Q96M95 Y_RNA.632-201ENST00000459189 102 ntBASIC-2.42□□□□□ -2.8
CCDC42Q96M95 RNA5SP180-201ENST00000516181 101 ntBASIC-2.42□□□□□ -2.8
CCDC42Q96M95 AC080013.6-201ENST00000606185 215 ntBASIC-2.42□□□□□ -2.8
CCDC42Q96M95 Y_RNA.773-201ENST00000607168 90 ntBASIC-2.42□□□□□ -2.8
CCDC42Q96M95 Y_RNA.276-201ENST00000364732 109 ntBASIC-2.43□□□□□ -2.8
CCDC42Q96M95 RNU6-806P-201ENST00000365147 105 ntBASIC-2.43□□□□□ -2.8
CCDC42Q96M95 RNU6-1215P-201ENST00000384441 102 ntBASIC-2.43□□□□□ -2.8
CCDC42Q96M95 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-2.43□□□□□ -2.8
CCDC42Q96M95 Y_RNA.679-201ENST00000516416 91 ntBASIC-2.43□□□□□ -2.8
CCDC42Q96M95 RNU7-6P-201ENST00000516845 62 ntBASIC-2.43□□□□□ -2.8
CCDC42Q96M95 AL353803.5-201ENST00000599815 141 ntBASIC-2.43□□□□□ -2.8
CCDC42Q96M95 AL445584.3-201ENST00000617173 78 ntBASIC-2.43□□□□□ -2.8
CCDC42Q96M95 Y_RNA.263-201ENST00000364659 114 ntBASIC-2.44□□□□□ -2.8
CCDC42Q96M95 SNORD116-2-201ENST00000384274 95 ntBASIC-2.44□□□□□ -2.8
CCDC42Q96M95 RNU6-876P-201ENST00000391295 104 ntBASIC-2.44□□□□□ -2.8
CCDC42Q96M95 RNU6-101P-201ENST00000410323 104 ntBASIC-2.44□□□□□ -2.8
CCDC42Q96M95 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.44□□□□□ -2.8
CCDC42Q96M95 RNU6-1143P-201ENST00000516125 104 ntBASIC-2.44□□□□□ -2.8
CCDC42Q96M95 AC068339.1-201ENST00000526965 141 ntBASIC-2.44□□□□□ -2.8
CCDC42Q96M95 MIR4308-201ENST00000580634 81 ntBASIC-2.44□□□□□ -2.8
CCDC42Q96M95 DLEU2_3.1-201ENST00000620005 73 ntBASIC-2.44□□□□□ -2.8
CCDC42Q96M95 MIR6818-201ENST00000621576 65 ntBASIC-2.44□□□□□ -2.8
CCDC42Q96M95 U6.96-201ENST00000636425 70 ntBASIC-2.44□□□□□ -2.8
CCDC42Q96M95 Y_RNA.83-201ENST00000363005 113 ntBASIC-2.45□□□□□ -2.8
CCDC42Q96M95 AC113618.1-201ENST00000416747 285 ntBASIC-2.45□□□□□ -2.8
CCDC42Q96M95 MIR6888-201ENST00000621977 67 ntBASIC-2.45□□□□□ -2.8
CCDC42Q96M95 SNORD38.1-201ENST00000363863 68 ntBASIC-2.46□□□□□ -2.8
CCDC42Q96M95 Y_RNA.197-201ENST00000364004 102 ntBASIC-2.46□□□□□ -2.8
CCDC42Q96M95 RNU6-818P-201ENST00000364837 108 ntBASIC-2.46□□□□□ -2.8
CCDC42Q96M95 MIR527-201ENST00000385244 85 ntBASIC-2.46□□□□□ -2.8
CCDC42Q96M95 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-2.46□□□□□ -2.8
CCDC42Q96M95 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-2.46□□□□□ -2.8
CCDC42Q96M95 Y_RNA.721-201ENST00000517207 102 ntBASIC-2.46□□□□□ -2.8
CCDC42Q96M95 Y_RNA.26-201ENST00000362539 101 ntBASIC-2.47□□□□□ -2.8
CCDC42Q96M95 RNU6-1082P-201ENST00000364574 107 ntBASIC-2.47□□□□□ -2.8
CCDC42Q96M95 Y_RNA.315-201ENST00000365117 102 ntBASIC-2.47□□□□□ -2.8
CCDC42Q96M95 MIR1285-2-201ENST00000408311 88 ntBASIC-2.47□□□□□ -2.8
CCDC42Q96M95 RNU4-61P-201ENST00000411243 107 ntBASIC-2.47□□□□□ -2.8
CCDC42Q96M95 Y_RNA.651-201ENST00000459380 103 ntBASIC-2.47□□□□□ -2.8
CCDC42Q96M95 U2.14-201ENST00000615943 113 ntBASIC-2.47□□□□□ -2.8
CCDC42Q96M95 SNORD115-33-201ENST00000363723 82 ntBASIC-2.48□□□□□ -2.81
CCDC42Q96M95 Y_RNA.584-201ENST00000391090 114 ntBASIC-2.48□□□□□ -2.81
CCDC42Q96M95 RNU6-1313P-201ENST00000362622 102 ntBASIC-2.49□□□□□ -2.81
CCDC42Q96M95 Y_RNA.70-201ENST00000362886 110 ntBASIC-2.49□□□□□ -2.81
CCDC42Q96M95 RNU6-1290P-201ENST00000362957 109 ntBASIC-2.49□□□□□ -2.81
CCDC42Q96M95 SNORA26.4-201ENST00000391188 123 ntBASIC-2.49□□□□□ -2.81
CCDC42Q96M95 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-2.49□□□□□ -2.81
CCDC42Q96M95 MTND5P22-201ENST00000458380 195 ntBASIC-2.49□□□□□ -2.81
CCDC42Q96M95 AC021146.9-201ENST00000512503 156 ntBASIC-2.49□□□□□ -2.81
CCDC42Q96M95 MIR4770-201ENST00000579149 58 ntBASIC-2.49□□□□□ -2.81
CCDC42Q96M95 AL137067.1-201ENST00000615933 120 ntBASIC-2.49□□□□□ -2.81
CCDC42Q96M95 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-2.49□□□□□ -2.81
CCDC42Q96M95 RNU6-924P-201ENST00000362926 108 ntBASIC-2.5□□□□□ -2.81
CCDC42Q96M95 RNU6-495P-201ENST00000362995 107 ntBASIC-2.5□□□□□ -2.81
CCDC42Q96M95 Y_RNA.181-201ENST00000363872 101 ntBASIC-2.5□□□□□ -2.81
CCDC42Q96M95 RNU6-1052P-201ENST00000411398 104 ntBASIC-2.5□□□□□ -2.81
CCDC42Q96M95 FGF7P6-202ENST00000451282 293 ntBASIC-2.5□□□□□ -2.81
CCDC42Q96M95 RNU6-719P-201ENST00000516671 104 ntBASIC-2.5□□□□□ -2.81
CCDC42Q96M95 AL132765.2-201ENST00000610812 351 ntBASIC-2.5□□□□□ -2.81
CCDC42Q96M95 AC090971.5-201ENST00000621102 293 ntBASIC-2.5□□□□□ -2.81
CCDC42Q96M95 MIR1246-201ENST00000636535 73 ntBASIC-2.5□□□□□ -2.81
CCDC42Q96M95 MIR198-201ENST00000637333 62 ntBASIC-2.5□□□□□ -2.81
CCDC42Q96M95 AL512310.12-203ENST00000640543 90 ntBASIC-2.5□□□□□ -2.81
CCDC42Q96M95 RNU6-746P-201ENST00000384112 109 ntBASIC-2.51□□□□□ -2.81
CCDC42Q96M95 Y_RNA.497-201ENST00000384447 98 ntBASIC-2.51□□□□□ -2.81
CCDC42Q96M95 SNX3P1X-201ENST00000414887 175 ntBASIC-2.51□□□□□ -2.81
CCDC42Q96M95 RNU6-75P-201ENST00000515944 104 ntBASIC-2.51□□□□□ -2.81
CCDC42Q96M95 RNU6-623P-201ENST00000363143 105 ntBASIC-2.52□□□□□ -2.81
CCDC42Q96M95 RNU6-226P-201ENST00000363778 107 ntBASIC-2.52□□□□□ -2.81
CCDC42Q96M95 Y_RNA.247-201ENST00000364500 92 ntBASIC-2.52□□□□□ -2.81
CCDC42Q96M95 Y_RNA.318-201ENST00000365131 97 ntBASIC-2.52□□□□□ -2.81
CCDC42Q96M95 RNU6-768P-201ENST00000384683 107 ntBASIC-2.52□□□□□ -2.81
CCDC42Q96M95 Y_RNA.633-201ENST00000459107 95 ntBASIC-2.52□□□□□ -2.81
CCDC42Q96M95 FGF7P7-201ENST00000514120 227 ntBASIC-2.52□□□□□ -2.81
CCDC42Q96M95 SNORD63.1-201ENST00000516178 80 ntBASIC-2.52□□□□□ -2.81
CCDC42Q96M95 MIR3163-201ENST00000581592 73 ntBASIC-2.52□□□□□ -2.81
CCDC42Q96M95 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-2.52□□□□□ -2.81
CCDC42Q96M95 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-2.52□□□□□ -2.81
CCDC42Q96M95 MIR1255B1-201ENST00000636325 63 ntBASIC-2.52□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 223.9 ms