Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 MIR3664-201ENST00000579074 99 ntBASIC1.92□□□□□ -2.1
TRIM11Q96F44 MIR4771-1-201ENST00000582617 74 ntBASIC1.92□□□□□ -2.1
TRIM11Q96F44 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
TRIM11Q96F44 RNA5SP245-201ENST00000364239 121 ntBASIC1.91□□□□□ -2.1
TRIM11Q96F44 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.91□□□□□ -2.1
TRIM11Q96F44 RNU6-542P-201ENST00000516405 103 ntBASIC1.91□□□□□ -2.1
TRIM11Q96F44 MIR4419B-201ENST00000577260 68 ntBASIC1.91□□□□□ -2.1
TRIM11Q96F44 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.9□□□□□ -2.1
TRIM11Q96F44 RNU6-829P-201ENST00000363700 112 ntBASIC1.9□□□□□ -2.11
TRIM11Q96F44 RNU6-668P-201ENST00000364180 107 ntBASIC1.9□□□□□ -2.11
TRIM11Q96F44 SNORA44.1-201ENST00000517031 108 ntBASIC1.9□□□□□ -2.11
TRIM11Q96F44 MIR3198-2-201ENST00000577868 80 ntBASIC1.9□□□□□ -2.11
TRIM11Q96F44 MIR3920-201ENST00000581751 86 ntBASIC1.9□□□□□ -2.11
TRIM11Q96F44 AC008608.1-201ENST00000603910 127 ntBASIC1.9□□□□□ -2.11
TRIM11Q96F44 MIR23A-201ENST00000385245 73 ntBASIC1.89□□□□□ -2.11
TRIM11Q96F44 MIR8063-201ENST00000621930 81 ntBASIC1.89□□□□□ -2.11
TRIM11Q96F44 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRIM11Q96F44 Y_RNA.236-201ENST00000364427 111 ntBASIC1.88□□□□□ -2.11
TRIM11Q96F44 Y_RNA.375-201ENST00000365625 101 ntBASIC1.88□□□□□ -2.11
TRIM11Q96F44 MIR216B-201ENST00000390186 82 ntBASIC1.88□□□□□ -2.11
TRIM11Q96F44 AC036111.3-201ENST00000526389 112 ntBASIC1.88□□□□□ -2.11
TRIM11Q96F44 RNU6-495P-201ENST00000362995 107 ntBASIC1.87□□□□□ -2.11
TRIM11Q96F44 SNORA70B-201ENST00000384210 135 ntBASIC1.87□□□□□ -2.11
TRIM11Q96F44 RNU6-364P-201ENST00000384387 107 ntBASIC1.87□□□□□ -2.11
TRIM11Q96F44 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.87□□□□□ -2.11
TRIM11Q96F44 RNU7-13P-201ENST00000516413 62 ntBASIC1.87□□□□□ -2.11
TRIM11Q96F44 AC092634.7-201ENST00000621022 103 ntBASIC1.87□□□□□ -2.11
TRIM11Q96F44 AC073869.9-201ENST00000641610 120 ntBASIC1.87□□□□□ -2.11
TRIM11Q96F44 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
TRIM11Q96F44 MIR302D-201ENST00000362275 68 ntBASIC1.86□□□□□ -2.11
TRIM11Q96F44 Y_RNA.330-201ENST00000365230 109 ntBASIC1.86□□□□□ -2.11
TRIM11Q96F44 RNU6-1039P-201ENST00000383931 107 ntBASIC1.86□□□□□ -2.11
TRIM11Q96F44 MIR9-3-201ENST00000385084 90 ntBASIC1.86□□□□□ -2.11
TRIM11Q96F44 MIR934-201ENST00000401241 83 ntBASIC1.86□□□□□ -2.11
TRIM11Q96F44 RPS26P5-201ENST00000418544 335 ntBASIC1.86□□□□□ -2.11
TRIM11Q96F44 MIR4676-201ENST00000583078 72 ntBASIC1.86□□□□□ -2.11
TRIM11Q96F44 SNORD114-1-201ENST00000362705 72 ntBASIC1.85□□□□□ -2.11
TRIM11Q96F44 SNORA25.5-201ENST00000363782 126 ntBASIC1.85□□□□□ -2.11
TRIM11Q96F44 MIR583-201ENST00000384846 75 ntBASIC1.85□□□□□ -2.11
TRIM11Q96F44 AC003989.2-201ENST00000440224 169 ntBASIC1.85□□□□□ -2.11
TRIM11Q96F44 RNU6-165P-201ENST00000517170 99 ntBASIC1.85□□□□□ -2.11
TRIM11Q96F44 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.85□□□□□ -2.11
TRIM11Q96F44 MIR6509-201ENST00000614603 85 ntBASIC1.85□□□□□ -2.11
TRIM11Q96F44 SNORD33-201ENST00000362761 85 ntBASIC1.84□□□□□ -2.11
TRIM11Q96F44 RNU6-940P-201ENST00000363433 104 ntBASIC1.84□□□□□ -2.11
TRIM11Q96F44 SNORD48-201ENST00000364953 64 ntBASIC1.84□□□□□ -2.11
TRIM11Q96F44 RNU6-1065P-201ENST00000384513 106 ntBASIC1.84□□□□□ -2.11
TRIM11Q96F44 MIR938-201ENST00000401216 83 ntBASIC1.84□□□□□ -2.11
TRIM11Q96F44 SNORD111-201ENST00000408139 94 ntBASIC1.84□□□□□ -2.11
TRIM11Q96F44 MIR4285-201ENST00000581001 85 ntBASIC1.84□□□□□ -2.11
TRIM11Q96F44 RNU6-1079P-201ENST00000362861 110 ntBASIC1.83□□□□□ -2.12
TRIM11Q96F44 SNORD1A-201ENST00000364968 72 ntBASIC1.83□□□□□ -2.12
TRIM11Q96F44 RNU6-1126P-201ENST00000384002 107 ntBASIC1.83□□□□□ -2.12
TRIM11Q96F44 RNU6-997P-201ENST00000384725 107 ntBASIC1.83□□□□□ -2.12
TRIM11Q96F44 snoU13.9-201ENST00000458927 103 ntBASIC1.83□□□□□ -2.12
TRIM11Q96F44 RNU7-102P-201ENST00000458948 62 ntBASIC1.83□□□□□ -2.12
TRIM11Q96F44 AC079140.2-201ENST00000506193 142 ntBASIC1.83□□□□□ -2.12
TRIM11Q96F44 RNU7-40P-201ENST00000516397 64 ntBASIC1.83□□□□□ -2.12
TRIM11Q96F44 MIR4513-201ENST00000581077 86 ntBASIC1.83□□□□□ -2.12
TRIM11Q96F44 AC106800.4-201ENST00000614905 153 ntBASIC1.83□□□□□ -2.12
TRIM11Q96F44 AC027335.2-201ENST00000624030 375 ntBASIC1.83□□□□□ -2.12
TRIM11Q96F44 RNU6-1335P-201ENST00000365426 107 ntBASIC1.82□□□□□ -2.12
TRIM11Q96F44 RNU1-41P-201ENST00000516161 162 ntBASIC1.82□□□□□ -2.12
TRIM11Q96F44 RNU1-48P-201ENST00000516400 162 ntBASIC1.82□□□□□ -2.12
TRIM11Q96F44 AC019176.1-201ENST00000518519 225 ntBASIC1.82□□□□□ -2.12
TRIM11Q96F44 NAMPTP3-201ENST00000569273 224 ntBASIC1.82□□□□□ -2.12
TRIM11Q96F44 MIR466-201ENST00000580653 84 ntBASIC1.82□□□□□ -2.12
TRIM11Q96F44 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
TRIM11Q96F44 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TRIM11Q96F44 RNA5SP403-201ENST00000363598 108 ntBASIC1.81□□□□□ -2.12
TRIM11Q96F44 RNA5SP192-201ENST00000364404 120 ntBASIC1.81□□□□□ -2.12
TRIM11Q96F44 SCARNA21.1-201ENST00000515996 128 ntBASIC1.81□□□□□ -2.12
TRIM11Q96F44 MIR548AG2-201ENST00000581228 64 ntBASIC1.81□□□□□ -2.12
TRIM11Q96F44 AC084768.2-201ENST00000622736 221 ntBASIC1.81□□□□□ -2.12
TRIM11Q96F44 MIR617-201ENST00000385030 97 ntBASIC1.8□□□□□ -2.12
TRIM11Q96F44 SNORA75.2-201ENST00000391138 150 ntBASIC1.8□□□□□ -2.12
TRIM11Q96F44 SNORA75.3-201ENST00000391231 150 ntBASIC1.8□□□□□ -2.12
TRIM11Q96F44 MIR3937-201ENST00000580135 106 ntBASIC1.8□□□□□ -2.12
TRIM11Q96F44 RNU6-645P-201ENST00000364649 106 ntBASIC1.79□□□□□ -2.12
TRIM11Q96F44 MIR203A-201ENST00000384836 110 ntBASIC1.79□□□□□ -2.12
TRIM11Q96F44 MIR3657-201ENST00000584818 117 ntBASIC1.79□□□□□ -2.12
TRIM11Q96F44 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.79□□□□□ -2.12
TRIM11Q96F44 MIR548O2-201ENST00000616090 70 ntBASIC1.79□□□□□ -2.12
TRIM11Q96F44 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
TRIM11Q96F44 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TRIM11Q96F44 SNORD115-24-201ENST00000363528 82 ntBASIC1.78□□□□□ -2.12
TRIM11Q96F44 MIR7-2-201ENST00000384970 110 ntBASIC1.78□□□□□ -2.12
TRIM11Q96F44 AC048334.1-201ENST00000477975 159 ntBASIC1.78□□□□□ -2.12
TRIM11Q96F44 AL512310.8-201ENST00000550183 120 ntBASIC1.78□□□□□ -2.12
TRIM11Q96F44 MIR4804-201ENST00000581683 73 ntBASIC1.78□□□□□ -2.12
TRIM11Q96F44 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
TRIM11Q96F44 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
TRIM11Q96F44 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TRIM11Q96F44 Y_RNA.174-201ENST00000363781 105 ntBASIC1.77□□□□□ -2.13
TRIM11Q96F44 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
TRIM11Q96F44 Y_RNA.722-201ENST00000517279 114 ntBASIC1.77□□□□□ -2.13
TRIM11Q96F44 MIR4255-201ENST00000579351 72 ntBASIC1.77□□□□□ -2.13
TRIM11Q96F44 AL359821.1-201ENST00000605519 182 ntBASIC1.77□□□□□ -2.13
TRIM11Q96F44 uc_338.16-201ENST00000621804 95 ntBASIC1.77□□□□□ -2.13
TRIM11Q96F44 RNU6-369P-201ENST00000362515 102 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 248 ms