Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 RNU7-137P-201ENST00000516788 62 ntBASIC-0.82□□□□□ -2.54
TTC28Q96AY4 SNORA22.1-201ENST00000362701 134 ntBASIC-0.83□□□□□ -2.54
TTC28Q96AY4 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.83□□□□□ -2.54
TTC28Q96AY4 SNORA53-201ENST00000391141 249 ntBASIC-0.83□□□□□ -2.54
TTC28Q96AY4 MIR548E-201ENST00000408287 88 ntBASIC-0.83□□□□□ -2.54
TTC28Q96AY4 RNU6-592P-201ENST00000411333 103 ntBASIC-0.83□□□□□ -2.54
TTC28Q96AY4 AL353691.2-201ENST00000443795 59 ntBASIC-0.83□□□□□ -2.54
TTC28Q96AY4 HSPE1P25-201ENST00000455484 251 ntBASIC-0.83□□□□□ -2.54
TTC28Q96AY4 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.83□□□□□ -2.54
TTC28Q96AY4 RNU7-70P-201ENST00000516941 66 ntBASIC-0.83□□□□□ -2.54
TTC28Q96AY4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.83□□□□□ -2.54
TTC28Q96AY4 AC091932.4-201ENST00000623386 200 ntBASIC-0.83□□□□□ -2.54
TTC28Q96AY4 U6.92-201ENST00000636464 89 ntBASIC-0.83□□□□□ -2.54
TTC28Q96AY4 RNU4-17P-201ENST00000365598 141 ntBASIC-0.83□□□□□ -2.54
TTC28Q96AY4 MIR628-201ENST00000385229 95 ntBASIC-0.83□□□□□ -2.54
TTC28Q96AY4 RNU6-308P-201ENST00000390957 107 ntBASIC-0.83□□□□□ -2.54
TTC28Q96AY4 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.83□□□□□ -2.54
TTC28Q96AY4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.83□□□□□ -2.54
TTC28Q96AY4 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.83□□□□□ -2.54
TTC28Q96AY4 AL359881.1-201ENST00000602916 267 ntBASIC-0.83□□□□□ -2.54
TTC28Q96AY4 AL050303.3-201ENST00000613704 284 ntBASIC-0.83□□□□□ -2.54
TTC28Q96AY4 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.84□□□□□ -2.54
TTC28Q96AY4 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-0.84□□□□□ -2.54
TTC28Q96AY4 AC119751.7-201ENST00000600494 245 ntBASIC-0.84□□□□□ -2.54
TTC28Q96AY4 DEFB117-201ENST00000602356 141 ntBASIC-0.84□□□□□ -2.54
TTC28Q96AY4 AC073114.1-201ENST00000612027 490 ntBASIC-0.84□□□□□ -2.54
TTC28Q96AY4 RNU6-1169P-201ENST00000363537 103 ntBASIC-0.84□□□□□ -2.54
TTC28Q96AY4 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.84□□□□□ -2.54
TTC28Q96AY4 RNU6-973P-201ENST00000364690 107 ntBASIC-0.84□□□□□ -2.54
TTC28Q96AY4 Y_RNA.553-201ENST00000384670 102 ntBASIC-0.84□□□□□ -2.54
TTC28Q96AY4 SNORA19.1-201ENST00000410656 129 ntBASIC-0.84□□□□□ -2.54
TTC28Q96AY4 MTCO2P24-201ENST00000515611 426 ntBASIC-0.84□□□□□ -2.54
TTC28Q96AY4 RNU7-110P-201ENST00000516891 62 ntBASIC-0.84□□□□□ -2.54
TTC28Q96AY4 AL365205.2-201ENST00000594586 68 ntBASIC-0.84□□□□□ -2.54
TTC28Q96AY4 U2.1-201ENST00000618978 145 ntBASIC-0.84□□□□□ -2.54
TTC28Q96AY4 RNU6-845P-201ENST00000362578 103 ntBASIC-0.85□□□□□ -2.55
TTC28Q96AY4 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.85□□□□□ -2.55
TTC28Q96AY4 MIR581-201ENST00000384895 96 ntBASIC-0.85□□□□□ -2.55
TTC28Q96AY4 MIR216B-201ENST00000390186 82 ntBASIC-0.85□□□□□ -2.55
TTC28Q96AY4 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.85□□□□□ -2.55
TTC28Q96AY4 RNA5SP144-201ENST00000410846 116 ntBASIC-0.85□□□□□ -2.55
TTC28Q96AY4 SNORD63B-201ENST00000411005 70 ntBASIC-0.85□□□□□ -2.55
TTC28Q96AY4 AC007485.1-201ENST00000616755 206 ntBASIC-0.85□□□□□ -2.55
TTC28Q96AY4 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.86□□□□□ -2.55
TTC28Q96AY4 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.86□□□□□ -2.55
TTC28Q96AY4 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.86□□□□□ -2.55
TTC28Q96AY4 MIR526A2-201ENST00000390198 65 ntBASIC-0.86□□□□□ -2.55
TTC28Q96AY4 AC009161.1-201ENST00000417306 376 ntBASIC-0.86□□□□□ -2.55
TTC28Q96AY4 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-0.86□□□□□ -2.55
TTC28Q96AY4 AC019235.1-201ENST00000503847 207 ntBASIC-0.86□□□□□ -2.55
TTC28Q96AY4 RNU6-191P-201ENST00000516295 94 ntBASIC-0.86□□□□□ -2.55
TTC28Q96AY4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.86□□□□□ -2.55
TTC28Q96AY4 MIR4790-201ENST00000577799 79 ntBASIC-0.86□□□□□ -2.55
TTC28Q96AY4 DLEU2_1.1-201ENST00000612089 120 ntBASIC-0.86□□□□□ -2.55
TTC28Q96AY4 DLEU2_1.2-201ENST00000614667 120 ntBASIC-0.86□□□□□ -2.55
TTC28Q96AY4 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.86□□□□□ -2.55
TTC28Q96AY4 RNU6-243P-201ENST00000391140 107 ntBASIC-0.86□□□□□ -2.55
TTC28Q96AY4 AC113618.1-201ENST00000416747 285 ntBASIC-0.86□□□□□ -2.55
TTC28Q96AY4 AC097639.2-201ENST00000603159 172 ntBASIC-0.86□□□□□ -2.55
TTC28Q96AY4 AL603755.1-201ENST00000619504 163 ntBASIC-0.86□□□□□ -2.55
TTC28Q96AY4 AC090617.10-201ENST00000624308 134 ntBASIC-0.86□□□□□ -2.55
TTC28Q96AY4 RNU6-664P-201ENST00000362381 107 ntBASIC-0.87□□□□□ -2.55
TTC28Q96AY4 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.87□□□□□ -2.55
TTC28Q96AY4 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.87□□□□□ -2.55
TTC28Q96AY4 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.87□□□□□ -2.55
TTC28Q96AY4 RNU6-668P-201ENST00000364180 107 ntBASIC-0.87□□□□□ -2.55
TTC28Q96AY4 SNORD74.6-201ENST00000364796 70 ntBASIC-0.87□□□□□ -2.55
TTC28Q96AY4 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.87□□□□□ -2.55
TTC28Q96AY4 MIR519A2-201ENST00000384990 87 ntBASIC-0.87□□□□□ -2.55
TTC28Q96AY4 MIR2113-201ENST00000459007 91 ntBASIC-0.87□□□□□ -2.55
TTC28Q96AY4 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-0.87□□□□□ -2.55
TTC28Q96AY4 SERF1AP1-201ENST00000514575 187 ntBASIC-0.87□□□□□ -2.55
TTC28Q96AY4 RNU2-35P-201ENST00000516446 142 ntBASIC-0.87□□□□□ -2.55
TTC28Q96AY4 AC006362.1-201ENST00000567392 174 ntBASIC-0.87□□□□□ -2.55
TTC28Q96AY4 SNORD19-201ENST00000391191 68 ntBASIC-0.88□□□□□ -2.55
TTC28Q96AY4 MIR1255B2-201ENST00000408618 67 ntBASIC-0.88□□□□□ -2.55
TTC28Q96AY4 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.88□□□□□ -2.55
TTC28Q96AY4 MTATP6P19-201ENST00000413797 659 ntBASIC-0.88□□□□□ -2.55
TTC28Q96AY4 Y_RNA.693-201ENST00000516641 110 ntBASIC-0.88□□□□□ -2.55
TTC28Q96AY4 RNU7-4P-201ENST00000516961 62 ntBASIC-0.88□□□□□ -2.55
TTC28Q96AY4 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.88□□□□□ -2.55
TTC28Q96AY4 AC138907.4-201ENST00000570107 226 ntBASIC-0.88□□□□□ -2.55
TTC28Q96AY4 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.88□□□□□ -2.55
TTC28Q96AY4 Y_RNA.359-201ENST00000365498 102 ntBASIC-0.88□□□□□ -2.55
TTC28Q96AY4 RNU6-132P-201ENST00000383863 107 ntBASIC-0.88□□□□□ -2.55
TTC28Q96AY4 Y_RNA.402-201ENST00000383972 102 ntBASIC-0.88□□□□□ -2.55
TTC28Q96AY4 MIR203A-201ENST00000384836 110 ntBASIC-0.88□□□□□ -2.55
TTC28Q96AY4 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.88□□□□□ -2.55
TTC28Q96AY4 AF228730.3-201ENST00000436691 102 ntBASIC-0.88□□□□□ -2.55
TTC28Q96AY4 U8.20-201ENST00000459445 131 ntBASIC-0.88□□□□□ -2.55
TTC28Q96AY4 RNU6-1213P-201ENST00000517075 94 ntBASIC-0.88□□□□□ -2.55
TTC28Q96AY4 RNU6-264P-201ENST00000517134 104 ntBASIC-0.88□□□□□ -2.55
TTC28Q96AY4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.88□□□□□ -2.55
TTC28Q96AY4 RNU6-888P-201ENST00000363010 101 ntBASIC-0.89□□□□□ -2.55
TTC28Q96AY4 RNU6-774P-201ENST00000363238 107 ntBASIC-0.89□□□□□ -2.55
TTC28Q96AY4 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.89□□□□□ -2.55
TTC28Q96AY4 RNU6-608P-201ENST00000383927 104 ntBASIC-0.89□□□□□ -2.55
TTC28Q96AY4 RNU7-48P-201ENST00000458875 63 ntBASIC-0.89□□□□□ -2.55
TTC28Q96AY4 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.89□□□□□ -2.55
TTC28Q96AY4 MIR5688-201ENST00000580619 83 ntBASIC-0.89□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms