Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 RNU6-524P-201ENST00000384270 107 ntBASIC1.28□□□□□ -2.2
BRF1Q92994 SNORD105-201ENST00000386910 85 ntBASIC1.28□□□□□ -2.2
BRF1Q92994 MIR942-201ENST00000401111 86 ntBASIC1.28□□□□□ -2.2
BRF1Q92994 AC093729.1-201ENST00000513074 128 ntBASIC1.28□□□□□ -2.2
BRF1Q92994 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.28□□□□□ -2.2
BRF1Q92994 MIR4666B-201ENST00000578142 81 ntBASIC1.28□□□□□ -2.2
BRF1Q92994 AC025627.3-201ENST00000582078 182 ntBASIC1.28□□□□□ -2.2
BRF1Q92994 snoU13.31-201ENST00000607291 104 ntBASIC1.28□□□□□ -2.2
BRF1Q92994 MIR3202-2-201ENST00000635980 79 ntBASIC1.28□□□□□ -2.2
BRF1Q92994 MIR1245B-201ENST00000636115 69 ntBASIC1.28□□□□□ -2.2
BRF1Q92994 Y_RNA.32-201ENST00000362589 110 ntBASIC1.27□□□□□ -2.21
BRF1Q92994 Y_RNA.607-201ENST00000410597 98 ntBASIC1.27□□□□□ -2.21
BRF1Q92994 AC002350.1-201ENST00000490759 375 ntBASIC1.27□□□□□ -2.21
BRF1Q92994 SNORA31.14-201ENST00000516728 116 ntBASIC1.27□□□□□ -2.21
BRF1Q92994 TRDV1-202ENST00000621643 102 ntBASIC1.27□□□□□ -2.21
BRF1Q92994 RNU4-32P-201ENST00000363404 141 ntBASIC1.26□□□□□ -2.21
BRF1Q92994 SNORD115-37-201ENST00000363768 82 ntBASIC1.26□□□□□ -2.21
BRF1Q92994 RNU6-811P-201ENST00000384069 107 ntBASIC1.26□□□□□ -2.21
BRF1Q92994 Y_RNA.508-201ENST00000384502 114 ntBASIC1.26□□□□□ -2.21
BRF1Q92994 RNU6-1265P-201ENST00000516342 103 ntBASIC1.26□□□□□ -2.21
BRF1Q92994 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.25□□□□□ -2.21
BRF1Q92994 Y_RNA.327-201ENST00000365201 102 ntBASIC1.25□□□□□ -2.21
BRF1Q92994 RNU6-787P-201ENST00000384032 107 ntBASIC1.25□□□□□ -2.21
BRF1Q92994 RNU6-939P-201ENST00000384634 107 ntBASIC1.25□□□□□ -2.21
BRF1Q92994 MIR548U-201ENST00000390728 81 ntBASIC1.25□□□□□ -2.21
BRF1Q92994 SNORD78.1-201ENST00000390866 65 ntBASIC1.25□□□□□ -2.21
BRF1Q92994 AL603825.1-201ENST00000438481 80 ntBASIC1.25□□□□□ -2.21
BRF1Q92994 Y_RNA.685-201ENST00000516532 108 ntBASIC1.25□□□□□ -2.21
BRF1Q92994 MTRNR2L2-201ENST00000604882 87 ntBASIC1.25□□□□□ -2.21
BRF1Q92994 SNORD114-21-201ENST00000606412 72 ntBASIC1.25□□□□□ -2.21
BRF1Q92994 MIR518E-201ENST00000385252 88 ntBASIC1.24□□□□□ -2.21
BRF1Q92994 RNA5SP255-201ENST00000516370 107 ntBASIC1.24□□□□□ -2.21
BRF1Q92994 AC140658.3-201ENST00000567603 271 ntBASIC1.24□□□□□ -2.21
BRF1Q92994 MIR3064-201ENST00000581130 66 ntBASIC1.24□□□□□ -2.21
BRF1Q92994 RNU6-132P-201ENST00000383863 107 ntBASIC1.23□□□□□ -2.21
BRF1Q92994 AL606490.4-201ENST00000423117 127 ntBASIC1.23□□□□□ -2.21
BRF1Q92994 RNU7-153P-201ENST00000516455 62 ntBASIC1.23□□□□□ -2.21
BRF1Q92994 MIR4295-201ENST00000585286 85 ntBASIC1.23□□□□□ -2.21
BRF1Q92994 AC104996.3-201ENST00000590718 94 ntBASIC1.23□□□□□ -2.21
BRF1Q92994 RNA5SP117-201ENST00000365294 118 ntBASIC1.22□□□□□ -2.21
BRF1Q92994 RNU6-135P-201ENST00000516769 101 ntBASIC1.22□□□□□ -2.21
BRF1Q92994 MIR573-201ENST00000384964 99 ntBASIC1.21□□□□□ -2.22
BRF1Q92994 RNA5SP292-201ENST00000390974 118 ntBASIC1.21□□□□□ -2.22
BRF1Q92994 RNU6-1275P-201ENST00000391087 107 ntBASIC1.21□□□□□ -2.22
BRF1Q92994 Y_RNA.596-201ENST00000410462 109 ntBASIC1.21□□□□□ -2.22
BRF1Q92994 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.21□□□□□ -2.22
BRF1Q92994 SNORA25.13-201ENST00000516395 103 ntBASIC1.21□□□□□ -2.22
BRF1Q92994 MIR4796-201ENST00000580742 81 ntBASIC1.21□□□□□ -2.22
BRF1Q92994 U6.100-201ENST00000636230 99 ntBASIC1.21□□□□□ -2.22
BRF1Q92994 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
BRF1Q92994 RNU6-664P-201ENST00000362381 107 ntBASIC1.2□□□□□ -2.22
BRF1Q92994 RNU6-228P-201ENST00000362700 106 ntBASIC1.2□□□□□ -2.22
BRF1Q92994 RNA5SP403-201ENST00000363598 108 ntBASIC1.2□□□□□ -2.22
BRF1Q92994 RNU6-1124P-201ENST00000384169 107 ntBASIC1.2□□□□□ -2.22
BRF1Q92994 Y_RNA.491-201ENST00000384417 107 ntBASIC1.2□□□□□ -2.22
BRF1Q92994 AC087343.1-201ENST00000477341 475 ntBASIC1.2□□□□□ -2.22
BRF1Q92994 SNORA18.5-201ENST00000516616 101 ntBASIC1.2□□□□□ -2.22
BRF1Q92994 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.2□□□□□ -2.22
BRF1Q92994 MIRLET7F1-201ENST00000362202 87 ntBASIC1.19□□□□□ -2.22
BRF1Q92994 RNU6-624P-201ENST00000363411 107 ntBASIC1.19□□□□□ -2.22
BRF1Q92994 Y_RNA.221-201ENST00000364248 96 ntBASIC1.19□□□□□ -2.22
BRF1Q92994 Y_RNA.437-201ENST00000384113 113 ntBASIC1.19□□□□□ -2.22
BRF1Q92994 MIR4498-201ENST00000577599 66 ntBASIC1.19□□□□□ -2.22
BRF1Q92994 MIR4696-201ENST00000581431 70 ntBASIC1.19□□□□□ -2.22
BRF1Q92994 SNORD115-24-201ENST00000363528 82 ntBASIC1.18□□□□□ -2.22
BRF1Q92994 SNORD115-44-201ENST00000365391 82 ntBASIC1.18□□□□□ -2.22
BRF1Q92994 RNU6-1335P-201ENST00000365426 107 ntBASIC1.18□□□□□ -2.22
BRF1Q92994 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
BRF1Q92994 SNORD101-201ENST00000384027 73 ntBASIC1.18□□□□□ -2.22
BRF1Q92994 RNA5SP395-201ENST00000516567 118 ntBASIC1.18□□□□□ -2.22
BRF1Q92994 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.17□□□□□ -2.22
BRF1Q92994 Y_RNA.239-201ENST00000364444 113 ntBASIC1.17□□□□□ -2.22
BRF1Q92994 RNU4-38P-201ENST00000364472 129 ntBASIC1.17□□□□□ -2.22
BRF1Q92994 RNU6-392P-201ENST00000364926 101 ntBASIC1.17□□□□□ -2.22
BRF1Q92994 Y_RNA.338-201ENST00000365320 114 ntBASIC1.17□□□□□ -2.22
BRF1Q92994 Y_RNA.316-201ENST00000365118 111 ntBASIC1.16□□□□□ -2.22
BRF1Q92994 RNU7-161P-201ENST00000517289 62 ntBASIC1.16□□□□□ -2.22
BRF1Q92994 MIR4639-201ENST00000584938 69 ntBASIC1.16□□□□□ -2.22
BRF1Q92994 Y_RNA.313-201ENST00000365095 103 ntBASIC1.15□□□□□ -2.23
BRF1Q92994 MIR644A-201ENST00000385262 94 ntBASIC1.15□□□□□ -2.23
BRF1Q92994 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
BRF1Q92994 MIR1255A-201ENST00000408338 113 ntBASIC1.15□□□□□ -2.23
BRF1Q92994 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.15□□□□□ -2.23
BRF1Q92994 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.15□□□□□ -2.23
BRF1Q92994 RNU6-469P-201ENST00000516253 101 ntBASIC1.15□□□□□ -2.23
BRF1Q92994 MIR3612-201ENST00000579753 87 ntBASIC1.15□□□□□ -2.23
BRF1Q92994 AC103810.9-201ENST00000606688 112 ntBASIC1.15□□□□□ -2.23
BRF1Q92994 MIR337-201ENST00000362281 93 ntBASIC1.14□□□□□ -2.23
BRF1Q92994 Y_RNA.207-201ENST00000364142 106 ntBASIC1.14□□□□□ -2.23
BRF1Q92994 RNU6-652P-201ENST00000365488 107 ntBASIC1.14□□□□□ -2.23
BRF1Q92994 SNORD28-201ENST00000384706 75 ntBASIC1.14□□□□□ -2.23
BRF1Q92994 RNU6-321P-201ENST00000410912 106 ntBASIC1.14□□□□□ -2.23
BRF1Q92994 RNU6-557P-201ENST00000516842 110 ntBASIC1.14□□□□□ -2.23
BRF1Q92994 MIR4661-201ENST00000582720 75 ntBASIC1.14□□□□□ -2.23
BRF1Q92994 RNU6-279P-201ENST00000391297 101 ntBASIC1.13□□□□□ -2.23
BRF1Q92994 RNU6-935P-201ENST00000410371 100 ntBASIC1.13□□□□□ -2.23
BRF1Q92994 TRMT112P2-201ENST00000512910 132 ntBASIC1.13□□□□□ -2.23
BRF1Q92994 RNU7-13P-201ENST00000516413 62 ntBASIC1.13□□□□□ -2.23
BRF1Q92994 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.13□□□□□ -2.23
BRF1Q92994 SNORD18A-201ENST00000363753 72 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms