Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 Y_RNA.620-201ENST00000411009 88 ntBASIC0.87□□□□□ -2.27
LMO3Q8TAP4 FABP5P4-201ENST00000437203 171 ntBASIC0.87□□□□□ -2.27
LMO3Q8TAP4 AL161932.1-201ENST00000437408 146 ntBASIC0.87□□□□□ -2.27
LMO3Q8TAP4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.87□□□□□ -2.27
LMO3Q8TAP4 Y_RNA.648-201ENST00000459455 110 ntBASIC0.87□□□□□ -2.27
LMO3Q8TAP4 MIR4668-201ENST00000582284 70 ntBASIC0.87□□□□□ -2.27
LMO3Q8TAP4 AC062037.1-201ENST00000605302 128 ntBASIC0.87□□□□□ -2.27
LMO3Q8TAP4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.86□□□□□ -2.27
LMO3Q8TAP4 SNORD114-2-201ENST00000363953 78 ntBASIC0.86□□□□□ -2.27
LMO3Q8TAP4 RNU6-1134P-201ENST00000365156 101 ntBASIC0.86□□□□□ -2.27
LMO3Q8TAP4 Y_RNA.388-201ENST00000383919 113 ntBASIC0.86□□□□□ -2.27
LMO3Q8TAP4 RNU6-291P-201ENST00000384720 107 ntBASIC0.86□□□□□ -2.27
LMO3Q8TAP4 MIR520F-201ENST00000384824 87 ntBASIC0.86□□□□□ -2.27
LMO3Q8TAP4 Y_RNA.609-201ENST00000410669 89 ntBASIC0.86□□□□□ -2.27
LMO3Q8TAP4 RNU6-402P-201ENST00000410678 103 ntBASIC0.86□□□□□ -2.27
LMO3Q8TAP4 RNY4P29-201ENST00000410801 97 ntBASIC0.86□□□□□ -2.27
LMO3Q8TAP4 AC067940.1-201ENST00000458411 300 ntBASIC0.86□□□□□ -2.27
LMO3Q8TAP4 SNORD4B-201ENST00000459083 72 ntBASIC0.86□□□□□ -2.27
LMO3Q8TAP4 SNORD124-201ENST00000459577 104 ntBASIC0.86□□□□□ -2.27
LMO3Q8TAP4 SNORA72.7-201ENST00000516349 94 ntBASIC0.86□□□□□ -2.27
LMO3Q8TAP4 Y_RNA.697-201ENST00000516776 113 ntBASIC0.86□□□□□ -2.27
LMO3Q8TAP4 AP003327.1-201ENST00000529684 127 ntBASIC0.86□□□□□ -2.27
LMO3Q8TAP4 RNU6-1260P-201ENST00000362944 107 ntBASIC0.85□□□□□ -2.27
LMO3Q8TAP4 SNORA25.8-201ENST00000364831 128 ntBASIC0.85□□□□□ -2.27
LMO3Q8TAP4 RNU6-1152P-201ENST00000384576 107 ntBASIC0.85□□□□□ -2.27
LMO3Q8TAP4 RNY1P4-201ENST00000384595 115 ntBASIC0.85□□□□□ -2.27
LMO3Q8TAP4 RNU6-243P-201ENST00000391140 107 ntBASIC0.85□□□□□ -2.27
LMO3Q8TAP4 RNU7-85P-201ENST00000458851 63 ntBASIC0.85□□□□□ -2.27
LMO3Q8TAP4 RNU6-267P-201ENST00000516714 103 ntBASIC0.85□□□□□ -2.27
LMO3Q8TAP4 AL136317.1-201ENST00000612653 226 ntBASIC0.85□□□□□ -2.27
LMO3Q8TAP4 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.85□□□□□ -2.27
LMO3Q8TAP4 uc_338.16-201ENST00000621804 95 ntBASIC0.85□□□□□ -2.27
LMO3Q8TAP4 RNU6-633P-201ENST00000362612 103 ntBASIC0.84□□□□□ -2.27
LMO3Q8TAP4 RNU6-535P-201ENST00000384722 107 ntBASIC0.84□□□□□ -2.27
LMO3Q8TAP4 SNORA26.2-201ENST00000390922 122 ntBASIC0.84□□□□□ -2.27
LMO3Q8TAP4 SNORD89-201ENST00000390981 114 ntBASIC0.84□□□□□ -2.27
LMO3Q8TAP4 RNU7-195P-201ENST00000458793 62 ntBASIC0.84□□□□□ -2.27
LMO3Q8TAP4 snoU13.11-201ENST00000459219 104 ntBASIC0.84□□□□□ -2.27
LMO3Q8TAP4 OR2A41P-201ENST00000473586 105 ntBASIC0.84□□□□□ -2.27
LMO3Q8TAP4 AC138907.6-201ENST00000568401 126 ntBASIC0.84□□□□□ -2.27
LMO3Q8TAP4 AC138869.1-201ENST00000568623 124 ntBASIC0.84□□□□□ -2.27
LMO3Q8TAP4 SNORD114-24-201ENST00000365029 72 ntBASIC0.83□□□□□ -2.28
LMO3Q8TAP4 AC244505.6-201ENST00000452829 130 ntBASIC0.83□□□□□ -2.28
LMO3Q8TAP4 RNU6-75P-201ENST00000515944 104 ntBASIC0.83□□□□□ -2.28
LMO3Q8TAP4 Y_RNA.809-201ENST00000516058 95 ntBASIC0.83□□□□□ -2.28
LMO3Q8TAP4 IGLL4P-201ENST00000614590 133 ntBASIC0.83□□□□□ -2.28
LMO3Q8TAP4 MIR6779-201ENST00000617283 64 ntBASIC0.83□□□□□ -2.28
LMO3Q8TAP4 PVT1_3.1-201ENST00000620853 95 ntBASIC0.83□□□□□ -2.28
LMO3Q8TAP4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
LMO3Q8TAP4 SNORD105-201ENST00000386910 85 ntBASIC0.82□□□□□ -2.28
LMO3Q8TAP4 RNU6-519P-201ENST00000410590 108 ntBASIC0.82□□□□□ -2.28
LMO3Q8TAP4 AC002350.1-201ENST00000490759 375 ntBASIC0.82□□□□□ -2.28
LMO3Q8TAP4 RN7SKP12-201ENST00000516275 143 ntBASIC0.82□□□□□ -2.28
LMO3Q8TAP4 SNORA31.14-201ENST00000516728 116 ntBASIC0.82□□□□□ -2.28
LMO3Q8TAP4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.82□□□□□ -2.28
LMO3Q8TAP4 RNU6-509P-201ENST00000363519 107 ntBASIC0.81□□□□□ -2.28
LMO3Q8TAP4 RNY1P1-201ENST00000364372 112 ntBASIC0.81□□□□□ -2.28
LMO3Q8TAP4 MIR520H-201ENST00000385126 88 ntBASIC0.81□□□□□ -2.28
LMO3Q8TAP4 MIR942-201ENST00000401111 86 ntBASIC0.81□□□□□ -2.28
LMO3Q8TAP4 AC097635.1-201ENST00000450678 155 ntBASIC0.81□□□□□ -2.28
LMO3Q8TAP4 RPL39P28-201ENST00000465655 155 ntBASIC0.81□□□□□ -2.28
LMO3Q8TAP4 RNA5SP255-201ENST00000516370 107 ntBASIC0.81□□□□□ -2.28
LMO3Q8TAP4 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.81□□□□□ -2.28
LMO3Q8TAP4 AC025627.3-201ENST00000582078 182 ntBASIC0.81□□□□□ -2.28
LMO3Q8TAP4 AC211469.2-201ENST00000605461 205 ntBASIC0.81□□□□□ -2.28
LMO3Q8TAP4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.81□□□□□ -2.28
LMO3Q8TAP4 MIR494-201ENST00000349529 81 ntBASIC0.8□□□□□ -2.28
LMO3Q8TAP4 Y_RNA.32-201ENST00000362589 110 ntBASIC0.8□□□□□ -2.28
LMO3Q8TAP4 RNU6-957P-201ENST00000363652 99 ntBASIC0.8□□□□□ -2.28
LMO3Q8TAP4 Y_RNA.174-201ENST00000363781 105 ntBASIC0.8□□□□□ -2.28
LMO3Q8TAP4 SNORD115-27-201ENST00000364430 82 ntBASIC0.8□□□□□ -2.28
LMO3Q8TAP4 Y_RNA.283-201ENST00000364798 112 ntBASIC0.8□□□□□ -2.28
LMO3Q8TAP4 RNU6-1335P-201ENST00000365426 107 ntBASIC0.8□□□□□ -2.28
LMO3Q8TAP4 RNU6-979P-201ENST00000383896 107 ntBASIC0.8□□□□□ -2.28
LMO3Q8TAP4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.8□□□□□ -2.28
LMO3Q8TAP4 RNU6-592P-201ENST00000411333 103 ntBASIC0.8□□□□□ -2.28
LMO3Q8TAP4 MIR4536-1-201ENST00000583537 88 ntBASIC0.8□□□□□ -2.28
LMO3Q8TAP4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.8□□□□□ -2.28
LMO3Q8TAP4 MIR599-201ENST00000385069 95 ntBASIC0.79□□□□□ -2.28
LMO3Q8TAP4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
LMO3Q8TAP4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.79□□□□□ -2.28
LMO3Q8TAP4 MIR5000-201ENST00000577717 103 ntBASIC0.79□□□□□ -2.28
LMO3Q8TAP4 MTRNR2L2-201ENST00000604882 87 ntBASIC0.79□□□□□ -2.28
LMO3Q8TAP4 MIR548BB-201ENST00000626714 66 ntBASIC0.79□□□□□ -2.28
LMO3Q8TAP4 Y_RNA.73-201ENST00000362910 113 ntBASIC0.78□□□□□ -2.28
LMO3Q8TAP4 RNA5SP173-201ENST00000364857 136 ntBASIC0.78□□□□□ -2.28
LMO3Q8TAP4 RNU6-573P-201ENST00000383938 106 ntBASIC0.78□□□□□ -2.28
LMO3Q8TAP4 RNU6-524P-201ENST00000384270 107 ntBASIC0.78□□□□□ -2.28
LMO3Q8TAP4 AL606490.4-201ENST00000423117 127 ntBASIC0.78□□□□□ -2.28
LMO3Q8TAP4 AC022137.1-201ENST00000483735 151 ntBASIC0.78□□□□□ -2.28
LMO3Q8TAP4 MIR5588-201ENST00000581890 63 ntBASIC0.78□□□□□ -2.28
LMO3Q8TAP4 RNA5SP325-201ENST00000363756 130 ntBASIC0.77□□□□□ -2.29
LMO3Q8TAP4 RNA5SP117-201ENST00000365294 118 ntBASIC0.77□□□□□ -2.29
LMO3Q8TAP4 MIR519C-201ENST00000385053 87 ntBASIC0.77□□□□□ -2.29
LMO3Q8TAP4 MIR1236-201ENST00000408340 102 ntBASIC0.77□□□□□ -2.29
LMO3Q8TAP4 RNU7-171P-201ENST00000459581 62 ntBASIC0.77□□□□□ -2.29
LMO3Q8TAP4 RNU6-65P-201ENST00000516332 98 ntBASIC0.77□□□□□ -2.29
LMO3Q8TAP4 TRDV1-202ENST00000621643 102 ntBASIC0.77□□□□□ -2.29
LMO3Q8TAP4 AC006160.2-201ENST00000637708 154 ntBASIC0.77□□□□□ -2.29
LMO3Q8TAP4 RNA5SP403-201ENST00000363598 108 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms